RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ATP6V1AP38606 617 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 CHMP4BP1P59074 171 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 LMOD3Q0VAK6 560 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 LAPTM4AQ15012 233 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 MAP7D1Q3KQU3 841 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 CAPN12Q6ZSI9 719 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 RAVER1Q8IY67 606 aaKnown RBP5.77□□□□□ -1.49
CD44-213ENST00000525209 CRELD1Q96HD1 420 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 DMRTB1Q96MA1 342 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 MPHOSPH6Q99547 160 aaKnown RBP5.77□□□□□ -1.49
CD44-213ENST00000525209 MKNK1Q9BUB5 465 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 TMX4Q9H1E5 349 aaPredicted RBP5.77□□□□□ -1.49
CD44-213ENST00000525209 CASS4Q9NQ75 786 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 KIAA1024Q9UPX6 916 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 SCINQ9Y6U3 715 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 PER1O15534 1290 aaPredicted RBP5.76□□□□□ -1.49
CD44-213ENST00000525209 CTSHP09668 335 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 MASP1P48740 699 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 EXOSC10Q01780 885 aaKnown RBP5.76□□□□□ -1.49
CD44-213ENST00000525209 TTC39BQ5VTQ0 682 aaPredicted RBP5.76□□□□□ -1.49
CD44-213ENST00000525209 SPRYD7Q5W111 196 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 TRAF7Q6Q0C0 670 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 RNF19BQ6ZMZ0 732 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 RINLQ6ZS11 566 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 WDR75Q8IWA0 830 aaKnown RBP5.76□□□□□ -1.49
CD44-213ENST00000525209 TMC1Q8TDI8 760 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 APPBP2Q92624 585 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 HLA-CQ95604 372 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 THAP11Q96EK4 314 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 CEP63Q96MT8 703 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 SETDB2Q96T68 719 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 SNTG2Q9NY99 539 aa5.76□□□□□ -1.49
CD44-213ENST00000525209 TNFRSF10AO00220 468 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 ZBTB24O43167 697 aaPredicted RBP5.75□□□□□ -1.49
CD44-213ENST00000525209 PTMAP06454 111 aaKnown RBP5.75□□□□□ -1.49
CD44-213ENST00000525209 GNA15P30679 374 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 COPB2P35606 906 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 PAK2Q13177 524 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 NFE2Q16621 373 aaPredicted RBP5.75□□□□□ -1.49
CD44-213ENST00000525209 ZNF697Q5TEC3 545 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 LRP10Q7Z4F1 713 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 PGBD3Q8N328 593 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 SDR16C5Q8N3Y7 309 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 FAM160A2Q8N612 972 aaPredicted RBP5.75□□□□□ -1.49
CD44-213ENST00000525209 SH3TC2Q8TF17 1288 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 PPM1EQ8WY54 764 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 COL26A1Q96A83 441 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 ARPC5LQ9BPX5 153 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 PAGR1Q9BTK6 254 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 ARNT2Q9HBZ2 717 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 CNTN3Q9P232 1028 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 ANAPC4Q9UJX5 808 aa5.75□□□□□ -1.49
CD44-213ENST00000525209 EPB41L2O43491 1005 aaKnown RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 TSPAN6O43657 245 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 KRT18P05783 430 aaKnown RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 COL6A1P12109 1028 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 HCLS1P14317 486 aaPredicted RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 WEE1P30291 646 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 FKBP5Q13451 457 aaPredicted RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 RASA3Q14644 834 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 MAPRE1Q15691 268 aaKnown RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 SYCP2LQ5T4T6 812 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 EFCAB2Q5VUJ9 269 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 ALG1LQ6GMV1 187 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 HS2ST1Q7LGA3 356 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 ZNF598Q86UK7 904 aaKnown RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 ALKBH8Q96BT7 664 aaKnown RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 GPRASP2Q96D09 838 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 DEPDC7Q96QD5 511 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 INO80BQ9C086 356 aaPredicted RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 ZNF700Q9H0M5 742 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 KANSL2Q9H9L4 492 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 ARHGEF10LQ9HCE6 1279 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 NEUROD4Q9HD90 331 aa5.74□□□□□ -1.49
CD44-213ENST00000525209 FCF1Q9Y324 198 aaKnown RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 RBM19Q9Y4C8 960 aaKnown RBP5.74□□□□□ -1.49
CD44-213ENST00000525209 FAM221BA6H8Z2 402 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 SFI1A8K8P3 1242 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 C6orf229H3BNL8 230 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 ANP32CO43423 234 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 NRDCO43847 1150 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 USP5P45974 858 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 HLTFQ14527 1009 aaKnown RBP eCLIP5.73□□□□□ -1.49
CD44-213ENST00000525209 BRD3Q15059 726 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 BRDTQ58F21 947 aaPredicted RBP5.73□□□□□ -1.49
CD44-213ENST00000525209 CCDC102BQ68D86 513 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 BRICD5Q6PL45 260 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 HOMER1Q86YM7 354 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 TPCN2Q8NHX9 752 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 RASGRP4Q8TDF6 673 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 FAM129BQ96TA1 746 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 ZNF408Q9H9D4 720 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 CHST12Q9NRB3 414 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 AK5Q9Y6K8 562 aa5.73□□□□□ -1.49
CD44-213ENST00000525209 GPR182O15218 404 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 KLF4O43474 513 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 FOSP01100 380 aaPredicted RBP5.72□□□□□ -1.49
CD44-213ENST00000525209 SSBP05455 408 aaKnown RBP eCLIP5.72□□□□□ -1.49
CD44-213ENST00000525209 MYL1P05976 194 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 MPSTP25325 297 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms