RNA–Protein interactions for RNA: ENST00000525208.1

GSDMD-203, Transcript of gasdermin D, humanhuman

TSL 3

Gene GSDMD, Length 691 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-203ENST00000525208 CCDC27Q2M243 656 aa27.26■■□□□ 1.95
GSDMD-203ENST00000525208 HSP90AB3PQ58FF7 597 aa27.26■■□□□ 1.95
GSDMD-203ENST00000525208 OLFM4Q6UX06 510 aa27.26■■□□□ 1.95
GSDMD-203ENST00000525208 C8orf58Q8NAV2 365 aa27.26■■□□□ 1.95
GSDMD-203ENST00000525208 UTP14AQ9BVJ6 771 aaKnown RBP27.26■■□□□ 1.95
GSDMD-203ENST00000525208 TAOK3Q9H2K8 898 aa27.26■■□□□ 1.95
GSDMD-203ENST00000525208 TIAM2Q8IVF5 1701 aa27.25■■□□□ 1.95
GSDMD-203ENST00000525208 C3orf67Q6ZVT6 689 aa27.25■■□□□ 1.95
GSDMD-203ENST00000525208 NLRP10Q86W26 655 aa27.25■■□□□ 1.95
GSDMD-203ENST00000525208 WWC1Q8IX03 1113 aa27.25■■□□□ 1.95
GSDMD-203ENST00000525208 HYPKQ9NX55 129 aa27.25■■□□□ 1.95
GSDMD-203ENST00000525208 HOXA10P31260 410 aaPredicted RBP27.24■■□□□ 1.95
GSDMD-203ENST00000525208 SLC10A5Q5PT55 438 aa27.24■■□□□ 1.95
GSDMD-203ENST00000525208 ANKRD13DQ6ZTN6 518 aa27.24■■□□□ 1.95
GSDMD-203ENST00000525208 PLBD2Q8NHP8 589 aa27.24■■□□□ 1.95
GSDMD-203ENST00000525208 RRAGCQ9HB90 399 aa27.24■■□□□ 1.95
GSDMD-203ENST00000525208 GLTPD2A6NH11 291 aa27.23■■□□□ 1.95
GSDMD-203ENST00000525208 CCDC93Q567U6 631 aa27.23■■□□□ 1.95
GSDMD-203ENST00000525208 TOMM70O94826 608 aa27.22■■□□□ 1.95
GSDMD-203ENST00000525208 SYNE4Q8N205 404 aa27.22■■□□□ 1.95
GSDMD-203ENST00000525208 RPGRQ92834 1020 aaKnown RBP27.22■■□□□ 1.95
GSDMD-203ENST00000525208 NCBP3Q53F19 620 aaKnown RBP27.2■■□□□ 1.94
GSDMD-203ENST00000525208 TSPYL6Q8N831 410 aa27.2■■□□□ 1.94
GSDMD-203ENST00000525208 TSR2Q969E8 191 aaKnown RBP27.2■■□□□ 1.94
GSDMD-203ENST00000525208 NLRP3Q96P20 1036 aa27.2■■□□□ 1.94
GSDMD-203ENST00000525208 CRAMP1Q96RY5 1269 aa27.19■■□□□ 1.94
GSDMD-203ENST00000525208 ISCA1Q9BUE6 129 aa27.19■■□□□ 1.94
GSDMD-203ENST00000525208 PHAXQ9H814 394 aaKnown RBP27.19■■□□□ 1.94
GSDMD-203ENST00000525208 RNF123Q5XPI4 1314 aa27.18■■□□□ 1.94
GSDMD-203ENST00000525208 LAMB2P55268 1798 aa27.18■■□□□ 1.94
GSDMD-203ENST00000525208 FKBP4Q02790 459 aaKnown RBP eCLIP27.18■■□□□ 1.94
GSDMD-203ENST00000525208 RTKN2Q8IZC4 609 aa27.18■■□□□ 1.94
GSDMD-203ENST00000525208 ZNF428Q96B54 188 aa27.18■■□□□ 1.94
GSDMD-203ENST00000525208 RBM17Q96I25 401 aaKnown RBP27.18■■□□□ 1.94
GSDMD-203ENST00000525208 TRMT112Q9UI30 125 aaKnown RBP27.18■■□□□ 1.94
GSDMD-203ENST00000525208 CEP350Q5VT06 3117 aa27.17■■□□□ 1.94
GSDMD-203ENST00000525208 HCLS1P14317 486 aaPredicted RBP27.17■■□□□ 1.94
GSDMD-203ENST00000525208 ATP5J2-PTCD1G3V325 749 aa27.16■■□□□ 1.94
GSDMD-203ENST00000525208 HSPA6P17066 643 aa27.16■■□□□ 1.94
GSDMD-203ENST00000525208 SNED1Q8TER0 1413 aa27.16■■□□□ 1.94
GSDMD-203ENST00000525208 SH3TC1Q8TE82 1336 aa27.16■■□□□ 1.94
GSDMD-203ENST00000525208 DPY19L2Q6NUT2 758 aa27.15■■□□□ 1.94
GSDMD-203ENST00000525208 ZNF277Q9NRM2 450 aaPredicted RBP27.15■■□□□ 1.94
GSDMD-203ENST00000525208 SALL2Q9Y467 1007 aaPredicted RBP27.15■■□□□ 1.94
GSDMD-203ENST00000525208 IL16Q14005 1332 aa27.15■■□□□ 1.94
GSDMD-203ENST00000525208 CCDC30Q5VVM6 783 aa27.14■■□□□ 1.94
GSDMD-203ENST00000525208 SLC51AQ86UW1 340 aa27.14■■□□□ 1.94
GSDMD-203ENST00000525208 C16orf71Q8IYS4 520 aaPredicted RBP27.14■■□□□ 1.94
GSDMD-203ENST00000525208 RBM46Q8TBY0 533 aaKnown RBP27.14■■□□□ 1.94
GSDMD-203ENST00000525208 TAF1P21675 1872 aa27.13■■□□□ 1.93
GSDMD-203ENST00000525208 POTECB2RU33 542 aa27.13■■□□□ 1.93
GSDMD-203ENST00000525208 VEGFAP15692 232 aaPredicted RBP27.13■■□□□ 1.93
GSDMD-203ENST00000525208 CC2D2BQ6DHV5 1058 aa27.13■■□□□ 1.93
GSDMD-203ENST00000525208 RIC3Q7Z5B4 369 aa27.13■■□□□ 1.93
GSDMD-203ENST00000525208 FAM9BQ8IZU0 186 aa27.13■■□□□ 1.93
GSDMD-203ENST00000525208 TRIM28Q13263 835 aaKnown RBP27.12■■□□□ 1.93
GSDMD-203ENST00000525208 WDR90Q96KV7 1748 aa27.11■■□□□ 1.93
GSDMD-203ENST00000525208 TCERG1O14776 1098 aaKnown RBP27.11■■□□□ 1.93
GSDMD-203ENST00000525208 PPEF1O14829 653 aaPredicted RBP27.11■■□□□ 1.93
GSDMD-203ENST00000525208 GOLGA2Q08379 1002 aa27.11■■□□□ 1.93
GSDMD-203ENST00000525208 PSMD1Q99460 953 aa27.11■■□□□ 1.93
GSDMD-203ENST00000525208 CHMP4AQ9BY43 222 aa27.11■■□□□ 1.93
GSDMD-203ENST00000525208 DDX60Q8IY21 1712 aaKnown RBP27.1■■□□□ 1.93
GSDMD-203ENST00000525208 FAM89AQ96GI7 184 aa27.1■■□□□ 1.93
GSDMD-203ENST00000525208 ABCC4O15439 1325 aa27.1■■□□□ 1.93
GSDMD-203ENST00000525208 DDNO94850 711 aaPredicted RBP27.09■■□□□ 1.93
GSDMD-203ENST00000525208 IARSP41252 1262 aaKnown RBP27.09■■□□□ 1.93
GSDMD-203ENST00000525208 WDR63Q8IWG1 891 aa27.09■■□□□ 1.93
GSDMD-203ENST00000525208 TWISTNBQ3B726 338 aaPredicted RBP27.08■■□□□ 1.93
GSDMD-203ENST00000525208 ATP6V0A2Q9Y487 856 aa27.07■■□□□ 1.92
GSDMD-203ENST00000525208 BBOX1O75936 387 aa27.06■■□□□ 1.92
GSDMD-203ENST00000525208 GRIPAP1Q4V328 841 aa27.06■■□□□ 1.92
GSDMD-203ENST00000525208 RTL5Q5HYW3 569 aaPredicted RBP27.06■■□□□ 1.92
GSDMD-203ENST00000525208 MYD88Q99836 296 aa27.06■■□□□ 1.92
GSDMD-203ENST00000525208 FANCIQ9NVI1 1328 aa27.06■■□□□ 1.92
GSDMD-203ENST00000525208 FSTL1Q12841 308 aa27.05■■□□□ 1.92
GSDMD-203ENST00000525208 DDX46Q7L014 1031 aaKnown RBP27.05■■□□□ 1.92
GSDMD-203ENST00000525208 DDX58O95786 925 aaKnown RBP27.04■■□□□ 1.92
GSDMD-203ENST00000525208 METTL22Q9BUU2 404 aaPredicted RBP27.04■■□□□ 1.92
GSDMD-203ENST00000525208 SPINK5Q9NQ38 1064 aaPredicted RBP27.04■■□□□ 1.92
GSDMD-203ENST00000525208 CACNA1FO60840 1977 aa27.04■■□□□ 1.92
GSDMD-203ENST00000525208 FZD9O00144 591 aa27.03■■□□□ 1.92
GSDMD-203ENST00000525208 SF3B3Q15393 1217 aaKnown RBP27.03■■□□□ 1.92
GSDMD-203ENST00000525208 G2E3Q7L622 706 aa27.03■■□□□ 1.92
GSDMD-203ENST00000525208 STK31Q9BXU1 1019 aa27.03■■□□□ 1.92
GSDMD-203ENST00000525208 ZNF541Q9H0D2 1346 aa27.03■■□□□ 1.92
GSDMD-203ENST00000525208 COL4A5P29400 1685 aa27.02■■□□□ 1.92
GSDMD-203ENST00000525208 IRS4O14654 1257 aaPredicted RBP27.02■■□□□ 1.92
GSDMD-203ENST00000525208 GRAPQ13588 217 aa27.02■■□□□ 1.92
GSDMD-203ENST00000525208 KSR2Q6VAB6 950 aa27.02■■□□□ 1.92
GSDMD-203ENST00000525208 SP8Q8IXZ3 490 aa27.02■■□□□ 1.92
GSDMD-203ENST00000525208 ZBTB38Q8NAP3 1195 aaPredicted RBP27.02■■□□□ 1.92
GSDMD-203ENST00000525208 CCDC191Q8NCU4 936 aa27.02■■□□□ 1.92
GSDMD-203ENST00000525208 GRAPLQ8TC17 118 aaPredicted RBP27.02■■□□□ 1.92
GSDMD-203ENST00000525208 MAP3K2Q9Y2U5 619 aa27.02■■□□□ 1.92
GSDMD-203ENST00000525208 PI4KAP2A4QPH2 592 aa27.01■■□□□ 1.91
GSDMD-203ENST00000525208 SLC4A2P04920 1241 aa27.01■■□□□ 1.91
GSDMD-203ENST00000525208 PI4KAP1Q8N8J0 262 aa27.01■■□□□ 1.91
GSDMD-203ENST00000525208 SMC1BQ8NDV3 1235 aa27.01■■□□□ 1.91
GSDMD-203ENST00000525208 VAMP4O75379 141 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms