RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SYNE4Q8N205 404 aa16.6■□□□□ 0.25
TRAPPC4-205ENST00000525079 IBTKQ9P2D0 1353 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC4-205ENST00000525079 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
TRAPPC4-205ENST00000525079 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
TRAPPC4-205ENST00000525079 ATP5J2-PTCD1G3V325 749 aa16.59■□□□□ 0.25
TRAPPC4-205ENST00000525079 LMNB1P20700 586 aa16.59■□□□□ 0.25
TRAPPC4-205ENST00000525079 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-205ENST00000525079 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
TRAPPC4-205ENST00000525079 OLFM4Q6UX06 510 aa16.59■□□□□ 0.25
TRAPPC4-205ENST00000525079 IL16Q14005 1332 aa16.59■□□□□ 0.25
TRAPPC4-205ENST00000525079 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
TRAPPC4-205ENST00000525079 C1QTNF8P60827 252 aa16.58■□□□□ 0.24
TRAPPC4-205ENST00000525079 TWISTNBQ3B726 338 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC4-205ENST00000525079 CRY2Q49AN0 593 aa16.58■□□□□ 0.24
TRAPPC4-205ENST00000525079 RIC3Q7Z5B4 369 aa16.58■□□□□ 0.24
TRAPPC4-205ENST00000525079 WDR63Q8IWG1 891 aa16.58■□□□□ 0.24
TRAPPC4-205ENST00000525079 C7orf43Q8WVR3 580 aa16.58■□□□□ 0.24
TRAPPC4-205ENST00000525079 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
TRAPPC4-205ENST00000525079 TRMT112Q9UI30 125 aaKnown RBP16.58■□□□□ 0.24
TRAPPC4-205ENST00000525079 FER1L6Q2WGJ9 1857 aa16.57■□□□□ 0.24
TRAPPC4-205ENST00000525079 FANCIQ9NVI1 1328 aa16.57■□□□□ 0.24
TRAPPC4-205ENST00000525079 HCLS1P14317 486 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC4-205ENST00000525079 NLRP3Q96P20 1036 aa16.57■□□□□ 0.24
TRAPPC4-205ENST00000525079 GOLGA2Q08379 1002 aa16.56■□□□□ 0.24
TRAPPC4-205ENST00000525079 SLC10A5Q5PT55 438 aa16.56■□□□□ 0.24
TRAPPC4-205ENST00000525079 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
TRAPPC4-205ENST00000525079 TAOK3Q9H2K8 898 aa16.56■□□□□ 0.24
TRAPPC4-205ENST00000525079 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
TRAPPC4-205ENST00000525079 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-205ENST00000525079 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
TRAPPC4-205ENST00000525079 EXOSC9Q06265 439 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-205ENST00000525079 CCDC93Q567U6 631 aa16.55■□□□□ 0.24
TRAPPC4-205ENST00000525079 RTL5Q5HYW3 569 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-205ENST00000525079 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
TRAPPC4-205ENST00000525079 SLC51AQ86UW1 340 aa16.55■□□□□ 0.24
TRAPPC4-205ENST00000525079 RBM17Q96I25 401 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-205ENST00000525079 KIF3CO14782 793 aa16.54■□□□□ 0.24
TRAPPC4-205ENST00000525079 HOXA10P31260 410 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC4-205ENST00000525079 FAM89AQ96GI7 184 aa16.54■□□□□ 0.24
TRAPPC4-205ENST00000525079 MYD88Q99836 296 aa16.54■□□□□ 0.24
TRAPPC4-205ENST00000525079 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
TRAPPC4-205ENST00000525079 CHMP4AQ9BY43 222 aa16.54■□□□□ 0.24
TRAPPC4-205ENST00000525079 SH3TC1Q8TE82 1336 aa16.53■□□□□ 0.24
TRAPPC4-205ENST00000525079 G2E3Q7L622 706 aa16.53■□□□□ 0.24
TRAPPC4-205ENST00000525079 CRAMP1Q96RY5 1269 aa16.53■□□□□ 0.24
TRAPPC4-205ENST00000525079 LAMB2P55268 1798 aa16.53■□□□□ 0.24
TRAPPC4-205ENST00000525079 TIAM2Q8IVF5 1701 aa16.53■□□□□ 0.24
TRAPPC4-205ENST00000525079 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.24
TRAPPC4-205ENST00000525079 KDM2BQ8NHM5 1336 aa16.52■□□□□ 0.24
TRAPPC4-205ENST00000525079 LTBP3Q9NS15 1303 aa16.52■□□□□ 0.24
TRAPPC4-205ENST00000525079 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
TRAPPC4-205ENST00000525079 RRAGCQ9HB90 399 aa16.52■□□□□ 0.24
TRAPPC4-205ENST00000525079 PPEF1O14829 653 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-205ENST00000525079 VAMP4O75379 141 aa16.51■□□□□ 0.23
TRAPPC4-205ENST00000525079 DDX58O95786 925 aaKnown RBP16.51■□□□□ 0.23
TRAPPC4-205ENST00000525079 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRAPPC4-205ENST00000525079 RTKN2Q8IZC4 609 aa16.51■□□□□ 0.23
TRAPPC4-205ENST00000525079 JARID2Q92833 1246 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-205ENST00000525079 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-205ENST00000525079 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
TRAPPC4-205ENST00000525079 ABCC4O15439 1325 aa16.5■□□□□ 0.23
TRAPPC4-205ENST00000525079 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
TRAPPC4-205ENST00000525079 TRIM28Q13263 835 aaKnown RBP16.5■□□□□ 0.23
TRAPPC4-205ENST00000525079 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
TRAPPC4-205ENST00000525079 METTL22Q9BUU2 404 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC4-205ENST00000525079 DDX60Q8IY21 1712 aaKnown RBP16.5■□□□□ 0.23
TRAPPC4-205ENST00000525079 ZC3H4Q9UPT8 1303 aaKnown RBP16.49■□□□□ 0.23
TRAPPC4-205ENST00000525079 DICER1Q9UPY3 1922 aaKnown RBP16.49■□□□□ 0.23
TRAPPC4-205ENST00000525079 GLTPD2A6NH11 291 aa16.49■□□□□ 0.23
TRAPPC4-205ENST00000525079 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
TRAPPC4-205ENST00000525079 MYH16Q9H6N6 1097 aa16.49■□□□□ 0.23
TRAPPC4-205ENST00000525079 TAF1P21675 1872 aa16.48■□□□□ 0.23
TRAPPC4-205ENST00000525079 IRS4O14654 1257 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC4-205ENST00000525079 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
TRAPPC4-205ENST00000525079 ZNF521Q96K83 1311 aa16.47■□□□□ 0.23
TRAPPC4-205ENST00000525079 CCER2I3L3R5 266 aa16.47■□□□□ 0.23
TRAPPC4-205ENST00000525079 CC2D2BQ6DHV5 1058 aa16.47■□□□□ 0.23
TRAPPC4-205ENST00000525079 DPY19L2Q6NUT2 758 aa16.47■□□□□ 0.23
TRAPPC4-205ENST00000525079 ZBTB38Q8NAP3 1195 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC4-205ENST00000525079 CCDC191Q8NCU4 936 aa16.47■□□□□ 0.23
TRAPPC4-205ENST00000525079 CWC25Q9NXE8 425 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC4-205ENST00000525079 SNED1Q8TER0 1413 aa16.46■□□□□ 0.23
TRAPPC4-205ENST00000525079 DDNO94850 711 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC4-205ENST00000525079 IGKV5-2P06315 115 aa16.46■□□□□ 0.23
TRAPPC4-205ENST00000525079 IARSP41252 1262 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-205ENST00000525079 FLIIQ13045 1269 aa16.46■□□□□ 0.23
TRAPPC4-205ENST00000525079 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC4-205ENST00000525079 ATP6V0A2Q9Y487 856 aa16.46■□□□□ 0.23
TRAPPC4-205ENST00000525079 BBOX1O75936 387 aa16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 TOMM70O94826 608 aa16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 PCCAP05165 728 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 FKBP5Q13451 457 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 GRAPQ13588 217 aa16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 CWF19L2Q2TBE0 894 aaKnown RBP16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 GRAPLQ8TC17 118 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 PSMD1Q99460 953 aa16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-205ENST00000525079 NEXNQ0ZGT2 675 aa16.44■□□□□ 0.22
TRAPPC4-205ENST00000525079 CELF1Q92879 486 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms