RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 UTP14AQ9BVJ6 771 aaKnown RBP14.49□□□□□ -0.09
TRAPPC4-204ENST00000524797 DDX60Q8IY21 1712 aaKnown RBP14.48□□□□□ -0.09
TRAPPC4-204ENST00000524797 KDM2BQ8NHM5 1336 aa14.48□□□□□ -0.09
TRAPPC4-204ENST00000524797 TCIRG1Q13488 830 aa14.48□□□□□ -0.09
TRAPPC4-204ENST00000524797 C8orf58Q8NAV2 365 aa14.48□□□□□ -0.09
TRAPPC4-204ENST00000524797 TAOK3Q9H2K8 898 aa14.48□□□□□ -0.09
TRAPPC4-204ENST00000524797 HYPKQ9NX55 129 aa14.48□□□□□ -0.09
TRAPPC4-204ENST00000524797 ALDH1B1P30837 517 aa14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 CCDC93Q567U6 631 aa14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 NLRP10Q86W26 655 aa14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 PLBD2Q8NHP8 589 aa14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 RNF123Q5XPI4 1314 aa14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 HOXA10P31260 410 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 SLC10A5Q5PT55 438 aa14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 C3orf67Q6ZVT6 689 aa14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 WWC1Q8IX03 1113 aa14.47□□□□□ -0.09
TRAPPC4-204ENST00000524797 WDR90Q96KV7 1748 aa14.46□□□□□ -0.09
TRAPPC4-204ENST00000524797 ELL2O00472 640 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC4-204ENST00000524797 RPGRQ92834 1020 aaKnown RBP14.46□□□□□ -0.09
TRAPPC4-204ENST00000524797 OLFM4Q6UX06 510 aa14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 ANKRD13DQ6ZTN6 518 aa14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 TSR2Q969E8 191 aaKnown RBP14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 IL16Q14005 1332 aa14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 TAF1P21675 1872 aa14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 SNED1Q8TER0 1413 aa14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 FKBP4Q02790 459 aaKnown RBP eCLIP14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 RBM17Q96I25 401 aaKnown RBP14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 CRAMP1Q96RY5 1269 aa14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 ISCA1Q9BUE6 129 aa14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 RRAGCQ9HB90 399 aa14.45□□□□□ -0.1
TRAPPC4-204ENST00000524797 GLTPD2A6NH11 291 aa14.44□□□□□ -0.1
TRAPPC4-204ENST00000524797 TSPYL6Q8N831 410 aa14.44□□□□□ -0.1
TRAPPC4-204ENST00000524797 NLRP3Q96P20 1036 aa14.44□□□□□ -0.1
TRAPPC4-204ENST00000524797 CACNA1FO60840 1977 aa14.44□□□□□ -0.1
TRAPPC4-204ENST00000524797 RTKN2Q8IZC4 609 aa14.43□□□□□ -0.1
TRAPPC4-204ENST00000524797 SYNE4Q8N205 404 aa14.43□□□□□ -0.1
TRAPPC4-204ENST00000524797 PHAXQ9H814 394 aaKnown RBP14.43□□□□□ -0.1
TRAPPC4-204ENST00000524797 TRMT112Q9UI30 125 aaKnown RBP14.43□□□□□ -0.1
TRAPPC4-204ENST00000524797 TOMM70O94826 608 aa14.43□□□□□ -0.1
TRAPPC4-204ENST00000524797 SH3TC1Q8TE82 1336 aa14.42□□□□□ -0.1
TRAPPC4-204ENST00000524797 HCLS1P14317 486 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC4-204ENST00000524797 GOLGA2Q08379 1002 aa14.42□□□□□ -0.1
TRAPPC4-204ENST00000524797 CCDC30Q5VVM6 783 aa14.42□□□□□ -0.1
TRAPPC4-204ENST00000524797 C16orf71Q8IYS4 520 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC4-204ENST00000524797 CHMP4AQ9BY43 222 aa14.42□□□□□ -0.1
TRAPPC4-204ENST00000524797 ATP5J2-PTCD1G3V325 749 aa14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 PPEF1O14829 653 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 HSPA6P17066 643 aa14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 CC2D2BQ6DHV5 1058 aa14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 RIC3Q7Z5B4 369 aa14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 FAM9BQ8IZU0 186 aa14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 RBM46Q8TBY0 533 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 ZNF428Q96B54 188 aa14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 WDR63Q8IWG1 891 aa14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 ZNF277Q9NRM2 450 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 SALL2Q9Y467 1007 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-204ENST00000524797 ABCC4O15439 1325 aa14.4□□□□□ -0.1
TRAPPC4-204ENST00000524797 TRIM28Q13263 835 aaKnown RBP14.4□□□□□ -0.1
TRAPPC4-204ENST00000524797 SLC51AQ86UW1 340 aa14.4□□□□□ -0.1
TRAPPC4-204ENST00000524797 PSMD1Q99460 953 aa14.4□□□□□ -0.1
TRAPPC4-204ENST00000524797 LRRC37AA6NMS7 1700 aa14.4□□□□□ -0.1
TRAPPC4-204ENST00000524797 FANCIQ9NVI1 1328 aa14.4□□□□□ -0.1
TRAPPC4-204ENST00000524797 IARSP41252 1262 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-204ENST00000524797 TWISTNBQ3B726 338 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-204ENST00000524797 DPY19L2Q6NUT2 758 aa14.39□□□□□ -0.11
TRAPPC4-204ENST00000524797 SCN4AP35499 1836 aa14.39□□□□□ -0.11
TRAPPC4-204ENST00000524797 POTECB2RU33 542 aa14.39□□□□□ -0.11
TRAPPC4-204ENST00000524797 VEGFAP15692 232 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-204ENST00000524797 GRIPAP1Q4V328 841 aa14.39□□□□□ -0.11
TRAPPC4-204ENST00000524797 MYD88Q99836 296 aa14.39□□□□□ -0.11
TRAPPC4-204ENST00000524797 COL4A5P29400 1685 aa14.38□□□□□ -0.11
TRAPPC4-204ENST00000524797 TCERG1O14776 1098 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-204ENST00000524797 FAM89AQ96GI7 184 aa14.38□□□□□ -0.11
TRAPPC4-204ENST00000524797 DDX58O95786 925 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 STK31Q9BXU1 1019 aa14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 ATP6V0A2Q9Y487 856 aa14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 COL4A1P02462 1669 aa14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 MYH3P11055 1940 aa14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 DDNO94850 711 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 FSTL1Q12841 308 aa14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 DDX46Q7L014 1031 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 METTL22Q9BUU2 404 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 ZNF541Q9H0D2 1346 aa14.37□□□□□ -0.11
TRAPPC4-204ENST00000524797 BBOX1O75936 387 aa14.36□□□□□ -0.11
TRAPPC4-204ENST00000524797 GRAPQ13588 217 aa14.36□□□□□ -0.11
TRAPPC4-204ENST00000524797 SF3B3Q15393 1217 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-204ENST00000524797 GRAPLQ8TC17 118 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC4-204ENST00000524797 IRS4O14654 1257 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 KSR2Q6VAB6 950 aa14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 G2E3Q7L622 706 aa14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 SP8Q8IXZ3 490 aa14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 ZBTB38Q8NAP3 1195 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 CCDC191Q8NCU4 936 aa14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 MAP3K2Q9Y2U5 619 aa14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 EXOSC9Q06265 439 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 SMC1BQ8NDV3 1235 aa14.35□□□□□ -0.11
TRAPPC4-204ENST00000524797 TMX4Q9H1E5 349 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms