RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 RTN1Q16799 776 aa6.1□□□□□ -1.43
CSDE1-208ENST00000524652 BTLAQ7Z6A9 289 aa6.1□□□□□ -1.43
CSDE1-208ENST00000524652 CHMP7Q8WUX9 453 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-208ENST00000524652 TRIM11Q96F44 468 aa6.1□□□□□ -1.43
CSDE1-208ENST00000524652 HINFPQ9BQA5 517 aa6.1□□□□□ -1.43
CSDE1-208ENST00000524652 PRDM6Q9NQX0 595 aa6.1□□□□□ -1.43
CSDE1-208ENST00000524652 SPDYE3A6NKU9 549 aa6.09□□□□□ -1.43
CSDE1-208ENST00000524652 TGFBR3LH3BV60 316 aa6.09□□□□□ -1.43
CSDE1-208ENST00000524652 SPATA31C1P0DKV0 1188 aa6.09□□□□□ -1.43
CSDE1-208ENST00000524652 ADH7P40394 386 aa6.09□□□□□ -1.43
CSDE1-208ENST00000524652 BAG6P46379 1132 aa6.09□□□□□ -1.43
CSDE1-208ENST00000524652 ARXQ96QS3 562 aa6.09□□□□□ -1.43
CSDE1-208ENST00000524652 PLVAPQ9BX97 442 aa6.09□□□□□ -1.43
CSDE1-208ENST00000524652 C1QTNF9BB2RNN3 333 aa6.08□□□□□ -1.44
CSDE1-208ENST00000524652 M0R082 166 aa6.08□□□□□ -1.44
CSDE1-208ENST00000524652 CHRNA4P43681 627 aa6.08□□□□□ -1.44
CSDE1-208ENST00000524652 CFAP70Q5T0N1 1121 aa6.08□□□□□ -1.44
CSDE1-208ENST00000524652 RAB44Q7Z6P3 723 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-208ENST00000524652 CD163Q86VB7 1156 aa6.08□□□□□ -1.44
CSDE1-208ENST00000524652 ZNF417Q8TAU3 575 aa6.08□□□□□ -1.44
CSDE1-208ENST00000524652 NGLY1Q96IV0 654 aa6.08□□□□□ -1.44
CSDE1-208ENST00000524652 ZNF587Q96SQ5 575 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-208ENST00000524652 FOXO3O43524 673 aa6.07□□□□□ -1.44
CSDE1-208ENST00000524652 STARD13Q9Y3M8 1113 aa6.07□□□□□ -1.44
CSDE1-208ENST00000524652 K7ELQ4 463 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-208ENST00000524652 ALBP02768 609 aa6.06□□□□□ -1.44
CSDE1-208ENST00000524652 EPB42P16452 691 aa6.06□□□□□ -1.44
CSDE1-208ENST00000524652 WEE1P30291 646 aa6.06□□□□□ -1.44
CSDE1-208ENST00000524652 COL9A3Q14050 684 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-208ENST00000524652 MICALL1Q8N3F8 863 aa6.06□□□□□ -1.44
CSDE1-208ENST00000524652 BHMTQ93088 406 aa6.06□□□□□ -1.44
CSDE1-208ENST00000524652 DMGDHQ9UI17 866 aaKnown RBP6.06□□□□□ -1.44
CSDE1-208ENST00000524652 PRRT3Q5FWE3 981 aa6.05□□□□□ -1.44
CSDE1-208ENST00000524652 C20orf204Q6ZNR8 217 aa6.05□□□□□ -1.44
CSDE1-208ENST00000524652 FAM200AQ8TCP9 573 aa6.05□□□□□ -1.44
CSDE1-208ENST00000524652 MYO19Q96H55 970 aa6.05□□□□□ -1.44
CSDE1-208ENST00000524652 BCS1LQ9Y276 419 aa6.05□□□□□ -1.44
CSDE1-208ENST00000524652 NID1P14543 1247 aa6.04□□□□□ -1.44
CSDE1-208ENST00000524652 GSX2Q9BZM3 304 aa6.04□□□□□ -1.44
CSDE1-208ENST00000524652 UBE2OQ9C0C9 1292 aaKnown RBP6.04□□□□□ -1.44
CSDE1-208ENST00000524652 QTRT2Q9H974 415 aaKnown RBP6.04□□□□□ -1.44
CSDE1-208ENST00000524652 C11orf16Q9NQ32 467 aa6.04□□□□□ -1.44
CSDE1-208ENST00000524652 ZNF777Q9ULD5 760 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-208ENST00000524652 LILRB5O75023 590 aa6.03□□□□□ -1.44
CSDE1-208ENST00000524652 LGR5O75473 907 aa6.03□□□□□ -1.44
CSDE1-208ENST00000524652 INPP5BP32019 993 aa6.03□□□□□ -1.44
CSDE1-208ENST00000524652 CCINQ13939 588 aa6.03□□□□□ -1.44
CSDE1-208ENST00000524652 SWI5Q1ZZU3 235 aa6.03□□□□□ -1.44
CSDE1-208ENST00000524652 VTI1AQ96AJ9 217 aa6.03□□□□□ -1.44
CSDE1-208ENST00000524652 PNMA5Q96PV4 448 aa6.03□□□□□ -1.44
CSDE1-208ENST00000524652 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.03□□□□□ -1.44
CSDE1-208ENST00000524652 SLC6A14Q9UN76 642 aa6.03□□□□□ -1.44
CSDE1-208ENST00000524652 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-208ENST00000524652 FURINP09958 794 aa6.02□□□□□ -1.45
CSDE1-208ENST00000524652 RFX1P22670 979 aa6.02□□□□□ -1.45
CSDE1-208ENST00000524652 IDH3AP50213 366 aa6.02□□□□□ -1.45
CSDE1-208ENST00000524652 ARSDP51689 593 aa6.02□□□□□ -1.45
CSDE1-208ENST00000524652 DGKZQ13574 1117 aa6.02□□□□□ -1.45
CSDE1-208ENST00000524652 ELOAQ14241 798 aaKnown RBP6.02□□□□□ -1.45
CSDE1-208ENST00000524652 PCSK7Q16549 785 aa6.02□□□□□ -1.45
CSDE1-208ENST00000524652 C8orf86Q6ZUL3 223 aa6.02□□□□□ -1.45
CSDE1-208ENST00000524652 NACC1Q96RE7 527 aa6.02□□□□□ -1.45
CSDE1-208ENST00000524652 KLK14Q9P0G3 267 aa6.02□□□□□ -1.45
CSDE1-208ENST00000524652 NOVA2Q9UNW9 492 aaKnown RBP6.02□□□□□ -1.45
CSDE1-208ENST00000524652 ACIN1Q9UKV3 1341 aaKnown RBP6.01□□□□□ -1.45
CSDE1-208ENST00000524652 APBA3O96018 575 aa6.01□□□□□ -1.45
CSDE1-208ENST00000524652 NFKB1P19838 968 aa6.01□□□□□ -1.45
CSDE1-208ENST00000524652 GRNP28799 593 aaKnown RBP6.01□□□□□ -1.45
CSDE1-208ENST00000524652 GATA4P43694 442 aa6.01□□□□□ -1.45
CSDE1-208ENST00000524652 TRIM28Q13263 835 aaKnown RBP6.01□□□□□ -1.45
CSDE1-208ENST00000524652 C11orf91Q3C1V1 193 aa6.01□□□□□ -1.45
CSDE1-208ENST00000524652 DNAJB12Q9NXW2 375 aaKnown RBP6.01□□□□□ -1.45
CSDE1-208ENST00000524652 MAP3K6O95382 1288 aa6□□□□□ -1.45
CSDE1-208ENST00000524652 TBC1D8BQ0IIM8 1120 aa6□□□□□ -1.45
CSDE1-208ENST00000524652 JPH1Q9HDC5 661 aaPredicted RBP6□□□□□ -1.45
CSDE1-208ENST00000524652 NAGPAQ9UK23 515 aa6□□□□□ -1.45
CSDE1-208ENST00000524652 FAM229AH3BQW9 127 aa5.99□□□□□ -1.45
CSDE1-208ENST00000524652 MICAL2O94851 1124 aa5.99□□□□□ -1.45
CSDE1-208ENST00000524652 PSAPL1Q6NUJ1 521 aa5.99□□□□□ -1.45
CSDE1-208ENST00000524652 IGFLR1Q9H665 355 aa5.99□□□□□ -1.45
CSDE1-208ENST00000524652 ZMIZ1Q9ULJ6 1067 aa5.99□□□□□ -1.45
CSDE1-208ENST00000524652 ELNP15502 786 aa5.98□□□□□ -1.45
CSDE1-208ENST00000524652 AFF1P51825 1210 aaKnown RBP5.98□□□□□ -1.45
CSDE1-208ENST00000524652 FKBP5Q13451 457 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-208ENST00000524652 CDCA8Q53HL2 280 aa5.98□□□□□ -1.45
CSDE1-208ENST00000524652 TRAPPC3LQ5T215 181 aa5.98□□□□□ -1.45
CSDE1-208ENST00000524652 TRPM4Q8TD43 1214 aa5.98□□□□□ -1.45
CSDE1-208ENST00000524652 FRRS1LQ9P0K9 344 aa5.98□□□□□ -1.45
CSDE1-208ENST00000524652 LRFN2Q9ULH4 789 aa5.98□□□□□ -1.45
CSDE1-208ENST00000524652 A0A0A0MRY4 1105 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 RGS9O75916 674 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-208ENST00000524652 EGFRP00533 1210 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 RAC1P63000 192 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 FAM69CQ0P6D2 419 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 DOC2BQ14184 412 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 GRIK4Q16099 956 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 OCLNQ16625 522 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 DHX32Q7L7V1 743 aaKnown RBP5.97□□□□□ -1.45
CSDE1-208ENST00000524652 FAM35AQ86V20 835 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 NUDT8Q8WV74 236 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms