RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 PRR5LQ6MZQ0 368 aa9.9□□□□□ -0.82
NPAS4-202ENST00000524617 MYD88Q99836 296 aa9.9□□□□□ -0.82
NPAS4-202ENST00000524617 NYXQ9GZU5 481 aa9.9□□□□□ -0.82
NPAS4-202ENST00000524617 AFDNP55196 1824 aaKnown RBP9.9□□□□□ -0.82
NPAS4-202ENST00000524617 LAMB2P55268 1798 aa9.9□□□□□ -0.82
NPAS4-202ENST00000524617 KIAA1551Q9HCM1 1747 aa9.9□□□□□ -0.83
NPAS4-202ENST00000524617 ABCC12Q96J65 1359 aa9.89□□□□□ -0.83
NPAS4-202ENST00000524617 ALDH1L1O75891 902 aa9.89□□□□□ -0.83
NPAS4-202ENST00000524617 GPTP24298 496 aa9.89□□□□□ -0.83
NPAS4-202ENST00000524617 ZKSCAN2Q63HK3 967 aa9.89□□□□□ -0.83
NPAS4-202ENST00000524617 PPP1R42Q7Z4L9 355 aa9.89□□□□□ -0.83
NPAS4-202ENST00000524617 BCL11AQ9H165 835 aa9.89□□□□□ -0.83
NPAS4-202ENST00000524617 TNRC6CQ9HCJ0 1690 aaKnown RBP9.89□□□□□ -0.83
NPAS4-202ENST00000524617 UTYO14607 1347 aa9.88□□□□□ -0.83
NPAS4-202ENST00000524617 CDHR2Q9BYE9 1310 aa9.88□□□□□ -0.83
NPAS4-202ENST00000524617 KLRG2A4D1S0 409 aaPredicted RBP9.88□□□□□ -0.83
NPAS4-202ENST00000524617 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
NPAS4-202ENST00000524617 PCCAP05165 728 aaPredicted RBP9.88□□□□□ -0.83
NPAS4-202ENST00000524617 GCKRQ14397 625 aa9.88□□□□□ -0.83
NPAS4-202ENST00000524617 CWF19L2Q2TBE0 894 aaKnown RBP9.88□□□□□ -0.83
NPAS4-202ENST00000524617 INTS3Q68E01 1043 aaKnown RBP9.88□□□□□ -0.83
NPAS4-202ENST00000524617 TPTE2Q6XPS3 522 aa9.88□□□□□ -0.83
NPAS4-202ENST00000524617 BICDL1Q6ZP65 573 aa9.88□□□□□ -0.83
NPAS4-202ENST00000524617 NBPF5PQ86XG9 351 aaPredicted RBP9.88□□□□□ -0.83
NPAS4-202ENST00000524617 CNBD1Q8NA66 436 aa9.88□□□□□ -0.83
NPAS4-202ENST00000524617 ZBTB38Q8NAP3 1195 aaPredicted RBP9.88□□□□□ -0.83
NPAS4-202ENST00000524617 UTP14AQ9BVJ6 771 aaKnown RBP9.88□□□□□ -0.83
NPAS4-202ENST00000524617 CWC25Q9NXE8 425 aaPredicted RBP9.88□□□□□ -0.83
NPAS4-202ENST00000524617 ANKRD31Q8N7Z5 1873 aa9.87□□□□□ -0.83
NPAS4-202ENST00000524617 SH3TC1Q8TE82 1336 aa9.87□□□□□ -0.83
NPAS4-202ENST00000524617 CCT4P50991 539 aaKnown RBP9.87□□□□□ -0.83
NPAS4-202ENST00000524617 CASP7P55210 303 aa9.87□□□□□ -0.83
NPAS4-202ENST00000524617 SLC10A5Q5PT55 438 aa9.87□□□□□ -0.83
NPAS4-202ENST00000524617 SRCIN1Q9C0H9 1055 aa9.87□□□□□ -0.83
NPAS4-202ENST00000524617 CD2APQ9Y5K6 639 aa9.87□□□□□ -0.83
NPAS4-202ENST00000524617 DDX60Q8IY21 1712 aaKnown RBP9.87□□□□□ -0.83
NPAS4-202ENST00000524617 DLEC1Q9Y238 1755 aa9.86□□□□□ -0.83
NPAS4-202ENST00000524617 H7C1W4 665 aa9.86□□□□□ -0.83
NPAS4-202ENST00000524617 COL11A2P13942 1736 aaPredicted RBP9.86□□□□□ -0.83
NPAS4-202ENST00000524617 RRP1P56182 461 aaKnown RBP9.86□□□□□ -0.83
NPAS4-202ENST00000524617 ST5P78524 1137 aa9.86□□□□□ -0.83
NPAS4-202ENST00000524617 CRY2Q49AN0 593 aa9.86□□□□□ -0.83
NPAS4-202ENST00000524617 FRAT1Q92837 279 aaPredicted RBP9.86□□□□□ -0.83
NPAS4-202ENST00000524617 BRIP1Q9BX63 1249 aa9.86□□□□□ -0.83
NPAS4-202ENST00000524617 PLA2G12BQ9BX93 195 aa9.86□□□□□ -0.83
NPAS4-202ENST00000524617 TRMT112Q9UI30 125 aaKnown RBP9.86□□□□□ -0.83
NPAS4-202ENST00000524617 PDZRN3Q9UPQ7 1066 aa9.86□□□□□ -0.83
NPAS4-202ENST00000524617 TNNQ9UQP3 1299 aa9.86□□□□□ -0.83
NPAS4-202ENST00000524617 MS4A1P11836 297 aa9.85□□□□□ -0.83
NPAS4-202ENST00000524617 RLBP1P12271 317 aa9.85□□□□□ -0.83
NPAS4-202ENST00000524617 TGFB2P61812 414 aa9.85□□□□□ -0.83
NPAS4-202ENST00000524617 PDE3AQ14432 1141 aa9.85□□□□□ -0.83
NPAS4-202ENST00000524617 ERFEQ4G0M1 354 aa9.85□□□□□ -0.83
NPAS4-202ENST00000524617 SLC4A10Q6U841 1118 aa9.85□□□□□ -0.83
NPAS4-202ENST00000524617 NUTM1Q86Y26 1132 aa9.85□□□□□ -0.83
NPAS4-202ENST00000524617 DZIP1LQ8IYY4 767 aaKnown RBP9.85□□□□□ -0.83
NPAS4-202ENST00000524617 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.85□□□□□ -0.83
NPAS4-202ENST00000524617 GRM8O00222 908 aa9.84□□□□□ -0.83
NPAS4-202ENST00000524617 HSP90B1P14625 803 aaKnown RBP9.84□□□□□ -0.83
NPAS4-202ENST00000524617 PDE6BP35913 854 aa9.84□□□□□ -0.83
NPAS4-202ENST00000524617 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
NPAS4-202ENST00000524617 TMEM57Q8N5G2 664 aa9.84□□□□□ -0.83
NPAS4-202ENST00000524617 FAM89AQ96GI7 184 aa9.84□□□□□ -0.83
NPAS4-202ENST00000524617 FHDC1Q9C0D6 1143 aaPredicted RBP9.84□□□□□ -0.83
NPAS4-202ENST00000524617 USP44Q9H0E7 712 aa9.84□□□□□ -0.83
NPAS4-202ENST00000524617 RTL9Q8NET4 1388 aa9.84□□□□□ -0.83
NPAS4-202ENST00000524617 FAM177BA6PVY3 158 aa9.83□□□□□ -0.84
NPAS4-202ENST00000524617 IRS4O14654 1257 aaPredicted RBP9.83□□□□□ -0.84
NPAS4-202ENST00000524617 SF3B3Q15393 1217 aaKnown RBP9.83□□□□□ -0.84
NPAS4-202ENST00000524617 UBE3BQ7Z3V4 1068 aa9.83□□□□□ -0.84
NPAS4-202ENST00000524617 FTSJ3Q8IY81 847 aaKnown RBP9.83□□□□□ -0.84
NPAS4-202ENST00000524617 SYNE4Q8N205 404 aa9.83□□□□□ -0.84
NPAS4-202ENST00000524617 CLUAP1Q96AJ1 413 aa9.83□□□□□ -0.84
NPAS4-202ENST00000524617 BRCA1P38398 1863 aaKnown RBP9.83□□□□□ -0.84
NPAS4-202ENST00000524617 PLIN1O60240 522 aa9.82□□□□□ -0.84
NPAS4-202ENST00000524617 PDE8AO60658 829 aa9.82□□□□□ -0.84
NPAS4-202ENST00000524617 NBPF7P0C2Y1 421 aaPredicted RBP9.82□□□□□ -0.84
NPAS4-202ENST00000524617 SRGNP10124 158 aa9.82□□□□□ -0.84
NPAS4-202ENST00000524617 KCNA3P22001 575 aa9.82□□□□□ -0.84
NPAS4-202ENST00000524617 GTF2E1P29083 439 aaPredicted RBP9.82□□□□□ -0.84
NPAS4-202ENST00000524617 HOXA10P31260 410 aaPredicted RBP9.82□□□□□ -0.84
NPAS4-202ENST00000524617 CTSWP56202 376 aa9.82□□□□□ -0.84
NPAS4-202ENST00000524617 MVPQ14764 893 aaKnown RBP9.82□□□□□ -0.84
NPAS4-202ENST00000524617 RABL6Q3YEC7 729 aaPredicted RBP9.82□□□□□ -0.84
NPAS4-202ENST00000524617 C3orf67Q6ZVT6 689 aa9.82□□□□□ -0.84
NPAS4-202ENST00000524617 NLGN2Q8NFZ4 835 aa9.82□□□□□ -0.84
NPAS4-202ENST00000524617 KAZALD1Q96I82 304 aa9.82□□□□□ -0.84
NPAS4-202ENST00000524617 SYT17Q9BSW7 474 aa9.82□□□□□ -0.84
NPAS4-202ENST00000524617 PPP1R1BQ9UD71 204 aaPredicted RBP9.82□□□□□ -0.84
NPAS4-202ENST00000524617 NPHP1O15259 732 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 CSF1RP07333 972 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 HCLS1P14317 486 aaPredicted RBP9.81□□□□□ -0.84
NPAS4-202ENST00000524617 NPR1P16066 1061 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 C20orf194Q5TEA3 1177 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 STYK1Q6J9G0 422 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 CCDC24Q8N4L8 307 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 PANK1Q8TE04 598 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 MASTLQ96GX5 879 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 SUCLG2Q96I99 432 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 NLRP3Q96P20 1036 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms