RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	NEURL1B	A8MQ27	555 aa		13.12	□□□□□ -0.31
SPIDR-222	ENST00000524006		K7ELQ4	463 aa	Predicted RBP	13.12	□□□□□ -0.31
SPIDR-222	ENST00000524006	NBPF14	Q5TI25	921 aa		13.12	□□□□□ -0.31
SPIDR-222	ENST00000524006	PTF1A	Q7RTS3	328 aa		13.12	□□□□□ -0.31
SPIDR-222	ENST00000524006	TNS2	Q63HR2	1409 aa		13.12	□□□□□ -0.31
SPIDR-222	ENST00000524006	UTY	O14607	1347 aa		13.12	□□□□□ -0.31
SPIDR-222	ENST00000524006	GLRX3	O76003	335 aa	Known RBP	13.11	□□□□□ -0.31
SPIDR-222	ENST00000524006	DEK	P35659	375 aa	Known RBP	13.11	□□□□□ -0.31
SPIDR-222	ENST00000524006	GCKR	Q14397	625 aa		13.11	□□□□□ -0.31
SPIDR-222	ENST00000524006	TSHZ3	Q63HK5	1081 aa		13.11	□□□□□ -0.31
SPIDR-222	ENST00000524006	PLBD2	Q8NHP8	589 aa		13.11	□□□□□ -0.31
SPIDR-222	ENST00000524006	SUCLG2	Q96I99	432 aa		13.11	□□□□□ -0.31
SPIDR-222	ENST00000524006	BICC1	Q9H694	974 aa	Known RBP	13.11	□□□□□ -0.31
SPIDR-222	ENST00000524006	NUP98	P52948	1817 aa		13.11	□□□□□ -0.31
SPIDR-222	ENST00000524006	SALL3	Q9BXA9	1300 aa		13.11	□□□□□ -0.31
SPIDR-222	ENST00000524006	PDIA6	Q15084	440 aa		13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	NKX1-1	Q15270	411 aa	Predicted RBP	13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	KIF6	Q6ZMV9	814 aa		13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	KIAA1211	Q6ZU35	1233 aa		13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	AACS	Q86V21	672 aa		13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	RUFY2	Q8WXA3	655 aa		13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	ESYT1	Q9BSJ8	1104 aa		13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	ANO2	Q9NQ90	1003 aa		13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	DIAPH3	Q9NSV4	1193 aa		13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	USP16	Q9Y5T5	823 aa		13.1	□□□□□ -0.31
SPIDR-222	ENST00000524006	PTCD1	O75127	700 aa	Known RBP	13.09	□□□□□ -0.31
SPIDR-222	ENST00000524006	DDB1	Q16531	1140 aa		13.09	□□□□□ -0.31
SPIDR-222	ENST00000524006	UBE3B	Q7Z3V4	1068 aa		13.09	□□□□□ -0.31
SPIDR-222	ENST00000524006	MARCH10	Q8NA82	808 aa	Predicted RBP	13.09	□□□□□ -0.31
SPIDR-222	ENST00000524006	USP26	Q9BXU7	913 aa		13.09	□□□□□ -0.31
SPIDR-222	ENST00000524006	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.09	□□□□□ -0.31
SPIDR-222	ENST00000524006	CHMP3	Q9Y3E7	222 aa		13.09	□□□□□ -0.31
SPIDR-222	ENST00000524006	MYH7	P12883	1935 aa		13.09	□□□□□ -0.31
SPIDR-222	ENST00000524006	HIP1	O00291	1037 aa		13.08	□□□□□ -0.32
SPIDR-222	ENST00000524006	PLSCR1	O15162	318 aa		13.08	□□□□□ -0.32
SPIDR-222	ENST00000524006	KCNQ2	O43526	872 aa		13.08	□□□□□ -0.32
SPIDR-222	ENST00000524006	PIP4K2A	P48426	406 aa	Predicted RBP	13.08	□□□□□ -0.32
SPIDR-222	ENST00000524006	PROM2	Q8N271	834 aa		13.08	□□□□□ -0.32
SPIDR-222	ENST00000524006	SPON1	Q9HCB6	807 aa		13.08	□□□□□ -0.32
SPIDR-222	ENST00000524006	ECHDC1	Q9NTX5	307 aa		13.08	□□□□□ -0.32
SPIDR-222	ENST00000524006	CWC25	Q9NXE8	425 aa	Predicted RBP	13.08	□□□□□ -0.32
SPIDR-222	ENST00000524006	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.08	□□□□□ -0.32
SPIDR-222	ENST00000524006		A0A087WZG4	1122 aa		13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	IGKV5-2	P06315	115 aa		13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	PTMS	P20962	102 aa		13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	CHML	P26374	656 aa		13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	GBP4	Q96PP9	640 aa		13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	SIL1	Q9H173	461 aa		13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	USP42	Q9H9J4	1324 aa	Known RBP	13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	COL15A1	P39059	1388 aa		13.07	□□□□□ -0.32
SPIDR-222	ENST00000524006	DDX11L8	A8MPP1	907 aa		13.06	□□□□□ -0.32
SPIDR-222	ENST00000524006	FRAT2	O75474	233 aa	Predicted RBP	13.06	□□□□□ -0.32
SPIDR-222	ENST00000524006	STARD3NL	O95772	234 aa		13.06	□□□□□ -0.32
SPIDR-222	ENST00000524006	PA2G4	Q9UQ80	394 aa	Known RBP	13.06	□□□□□ -0.32
SPIDR-222	ENST00000524006	SPEF2	Q9C093	1822 aa		13.06	□□□□□ -0.32
SPIDR-222	ENST00000524006	BCL9	O00512	1426 aa		13.05	□□□□□ -0.32
SPIDR-222	ENST00000524006	ATP5J2-PTCD1	G3V325	749 aa		13.05	□□□□□ -0.32
SPIDR-222	ENST00000524006	EPB41L2	O43491	1005 aa	Known RBP	13.05	□□□□□ -0.32
SPIDR-222	ENST00000524006	MAP4K4	O95819	1239 aa	Predicted RBP	13.05	□□□□□ -0.32
SPIDR-222	ENST00000524006	MCM2	P49736	904 aa		13.05	□□□□□ -0.32
SPIDR-222	ENST00000524006	IL27	Q8NEV9	243 aa		13.05	□□□□□ -0.32
SPIDR-222	ENST00000524006	RBM42	Q9BTD8	480 aa	Known RBP	13.05	□□□□□ -0.32
SPIDR-222	ENST00000524006	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.05	□□□□□ -0.32
SPIDR-222	ENST00000524006	ANTXR1	Q9H6X2	564 aa		13.05	□□□□□ -0.32
SPIDR-222	ENST00000524006	GOLGB1	Q14789	3259 aa	Known RBP	13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	GOLGA6L22	H0YM25	854 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	EXOC5	O00471	708 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	YY1	P25490	414 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	ANAPC15	P60006	121 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	PI4K2B	Q8TCG2	481 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	SYTL4	Q96C24	671 aa	Predicted RBP	13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	ARX	Q96QS3	562 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	ZBTB3	Q9H5J0	574 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	LAMB2	P55268	1798 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	RGPD4	Q7Z3J3	1758 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	SBF2	Q86WG5	1849 aa		13.04	□□□□□ -0.32
SPIDR-222	ENST00000524006	VSIG10	Q8N0Z9	540 aa		13.03	□□□□□ -0.32
SPIDR-222	ENST00000524006	EVI5L	Q96CN4	794 aa		13.03	□□□□□ -0.32
SPIDR-222	ENST00000524006	KIF2C	Q99661	725 aa		13.03	□□□□□ -0.32
SPIDR-222	ENST00000524006	FOXD4L1	Q9NU39	408 aa		13.03	□□□□□ -0.32
SPIDR-222	ENST00000524006	CIC	Q96RK0	1608 aa	Predicted RBP	13.02	□□□□□ -0.32
SPIDR-222	ENST00000524006	A1BG	P04217	495 aa		13.02	□□□□□ -0.33
SPIDR-222	ENST00000524006	KCNJ4	P48050	445 aa		13.02	□□□□□ -0.33
SPIDR-222	ENST00000524006	HSP90AB3P	Q58FF7	597 aa		13.02	□□□□□ -0.33
SPIDR-222	ENST00000524006	CCDC191	Q8NCU4	936 aa		13.02	□□□□□ -0.33
SPIDR-222	ENST00000524006	FSD1	Q9BTV5	496 aa		13.02	□□□□□ -0.33
SPIDR-222	ENST00000524006	NBPF26	B4DH59	902 aa		13.01	□□□□□ -0.33
SPIDR-222	ENST00000524006	GSE1	Q14687	1217 aa		13.01	□□□□□ -0.33
SPIDR-222	ENST00000524006	TAF7L	Q5H9L4	462 aa		13.01	□□□□□ -0.33
SPIDR-222	ENST00000524006	NBPF10	Q6P3W6	841 aa	Known RBP	13.01	□□□□□ -0.33
SPIDR-222	ENST00000524006	NBPF15	Q8N660	670 aa		13.01	□□□□□ -0.33
SPIDR-222	ENST00000524006	COPRS	Q9NQ92	184 aa		13.01	□□□□□ -0.33
SPIDR-222	ENST00000524006	RAD50	Q92878	1312 aa		13.01	□□□□□ -0.33
SPIDR-222	ENST00000524006	CASZ1	Q86V15	1759 aa		13.01	□□□□□ -0.33

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