RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 MKRN1Q9UHC7 482 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-239ENST00000523685 MYOM2P54296 1465 aa7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 LRPPRCP42704 1394 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 PLEKHH1Q9ULM0 1364 aa7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 ERVH48-1M5A8F1 160 aa7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 FSHRP23945 695 aa7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 DHX9Q08211 1270 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 USP4Q13107 963 aa7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 OXLD1Q5BKU9 147 aa7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 SNIP1Q8TAD8 396 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 SIRT1Q96EB6 747 aa7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 CDCA7Q9BWT1 371 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 NOD1Q9Y239 953 aa7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 CCDC9Q9Y3X0 531 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 CCDC144AA2RUR9 1427 aa7.77□□□□□ -1.17
CTNNA1-239ENST00000523685 BCL9LQ86UU0 1499 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 PXDNQ92626 1479 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 ATP5J2-PTCD1G3V325 749 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 GDF9O60383 454 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 ATG7O95352 703 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 ALDH1A1P00352 501 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 SAFB2Q14151 953 aaKnown RBP eCLIP7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 KRT28Q7Z3Y7 464 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 UNC5CLQ8IV45 518 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 LAMC1P11047 1609 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 CDC42BPGQ6DT37 1551 aa7.76□□□□□ -1.17
CTNNA1-239ENST00000523685 RGS20O76081 388 aa7.75□□□□□ -1.17
CTNNA1-239ENST00000523685 MYT1Q01538 1121 aa7.75□□□□□ -1.17
CTNNA1-239ENST00000523685 TRIM50Q86XT4 487 aa7.75□□□□□ -1.17
CTNNA1-239ENST00000523685 CCDC116Q8IYX3 515 aa7.75□□□□□ -1.17
CTNNA1-239ENST00000523685 MPHOSPH9Q99550 1183 aa7.75□□□□□ -1.17
CTNNA1-239ENST00000523685 WASF2Q9Y6W5 498 aa7.75□□□□□ -1.17
CTNNA1-239ENST00000523685 PRAG1Q86YV5 1406 aa7.75□□□□□ -1.17
CTNNA1-239ENST00000523685 SPATA31A3Q5VYP0 1347 aa7.75□□□□□ -1.17
CTNNA1-239ENST00000523685 COL22A1Q8NFW1 1626 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 PPLO60437 1756 aa7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 ANKRD30BQ9BXX2 1392 aa7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 TTC24A2A3L6 582 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 RASA1P20936 1047 aa7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 SF3B2Q13435 895 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 LARP1Q6PKG0 1096 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 DEFB132Q7Z7B7 95 aa7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 CYP4X1Q8N118 509 aa7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 RALGAPBQ86X10 1494 aa7.74□□□□□ -1.17
CTNNA1-239ENST00000523685 ABCC11Q96J66 1382 aa7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 SRCAPQ6ZRS2 3230 aa7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 YTHDC2Q9H6S0 1430 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 TNFRSF10AO00220 468 aa7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 MYCP01106 439 aaPredicted RBP7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 NR3C2P08235 984 aa7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 ATP1A2P50993 1020 aa7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 PSME1Q06323 249 aa7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 PPP1R26Q5T8A7 1209 aaPredicted RBP7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 TMPRSS4Q9NRS4 437 aa7.73□□□□□ -1.17
CTNNA1-239ENST00000523685 TECPR2O15040 1411 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 SPATA31E1Q6ZUB1 1445 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 FAM196BA6NMK8 535 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 CSB-PGBD3P0DP91 1061 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 PRR20EP86478 221 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 PRR20CP86479 221 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 PRR20DP86480 221 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 PRR20BP86481 221 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 PRR20AP86496 221 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 NNTQ13423 1086 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 CC2D2BQ6DHV5 1058 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 OGFOD1Q8N543 542 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 RETREG2Q8NC44 543 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 PMFBP1Q8TBY8 1022 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 PRAM1Q96QH2 718 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 TOR4AQ9NXH8 423 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 PGPEP1Q9NXJ5 209 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 POGKQ9P215 609 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 EMILIN1Q9Y6C2 1016 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 SLIT2O94813 1529 aa7.72□□□□□ -1.17
CTNNA1-239ENST00000523685 PIK3C2GO75747 1445 aa7.71□□□□□ -1.17
CTNNA1-239ENST00000523685 BLMP54132 1417 aaPredicted RBP7.71□□□□□ -1.17
CTNNA1-239ENST00000523685 J3QL48 77 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 SCTRP47872 440 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 ERVK-9P63128 1117 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 GTF2IP78347 998 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 PDE4CQ08493 712 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 PTK7Q13308 1070 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 ELOAQ14241 798 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 VPS72Q15906 364 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 TRIM67Q6ZTA4 783 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 LARGE2Q8N3Y3 721 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 HIRIP3Q9BW71 556 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 C14orf93Q9H972 538 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 CYLDQ9NQC7 956 aa7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 DNAAF2Q9NVR5 837 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 DHX57Q6P158 1386 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-239ENST00000523685 TNS3Q68CZ2 1445 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L10C9JJH3 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L12C9JPN9 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L21D6R901 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms