RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 DSC3Q14574 896 aa8.03□□□□□ -1.12
CTNNA1-238ENST00000523298 SAMD5Q5TGI4 173 aa8.03□□□□□ -1.12
CTNNA1-238ENST00000523298 ALKBH2Q6NS38 261 aa8.03□□□□□ -1.12
CTNNA1-238ENST00000523298 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
CTNNA1-238ENST00000523298 CEP63Q96MT8 703 aa8.03□□□□□ -1.12
CTNNA1-238ENST00000523298 NUCKS1Q9H1E3 243 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-238ENST00000523298 BRPF3Q9ULD4 1205 aa8.03□□□□□ -1.12
CTNNA1-238ENST00000523298 GPR25O00155 361 aa8.02□□□□□ -1.13
CTNNA1-238ENST00000523298 TNP2Q05952 138 aa8.02□□□□□ -1.13
CTNNA1-238ENST00000523298 PGBD3Q8N328 593 aa8.02□□□□□ -1.13
CTNNA1-238ENST00000523298 GTPBP3Q969Y2 492 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-238ENST00000523298 ABHD17AQ96GS6 310 aa8.02□□□□□ -1.13
CTNNA1-238ENST00000523298 SETDB2Q96T68 719 aa8.02□□□□□ -1.13
CTNNA1-238ENST00000523298 BRD7Q9NPI1 651 aa8.02□□□□□ -1.13
CTNNA1-238ENST00000523298 ANKIB1Q9P2G1 1089 aa8.02□□□□□ -1.13
CTNNA1-238ENST00000523298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-238ENST00000523298 ATXN7O15265 892 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-238ENST00000523298 TREHO43280 583 aa8.01□□□□□ -1.13
CTNNA1-238ENST00000523298 NDUFB5O43674 189 aa8.01□□□□□ -1.13
CTNNA1-238ENST00000523298 P4HBP07237 508 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-238ENST00000523298 ARSDP51689 593 aa8.01□□□□□ -1.13
CTNNA1-238ENST00000523298 FBXO33Q7Z6M2 555 aa8.01□□□□□ -1.13
CTNNA1-238ENST00000523298 RNF19AQ9NV58 838 aa8.01□□□□□ -1.13
CTNNA1-238ENST00000523298 FAM157BP0CG42 384 aa8□□□□□ -1.13
CTNNA1-238ENST00000523298 MAPTP10636 758 aaKnown RBP8□□□□□ -1.13
CTNNA1-238ENST00000523298 EFHC2Q5JST6 749 aa8□□□□□ -1.13
CTNNA1-238ENST00000523298 CMTR1Q8N1G2 835 aaKnown RBP8□□□□□ -1.13
CTNNA1-238ENST00000523298 VWA5B2Q8N398 1253 aa8□□□□□ -1.13
CTNNA1-238ENST00000523298 GPR161Q8N6U8 529 aaKnown RBP8□□□□□ -1.13
CTNNA1-238ENST00000523298 NEUROD4Q9HD90 331 aa8□□□□□ -1.13
CTNNA1-238ENST00000523298 GJA3Q9Y6H8 435 aa8□□□□□ -1.13
CTNNA1-238ENST00000523298 UNCXA6NJT0 531 aa7.99□□□□□ -1.13
CTNNA1-238ENST00000523298 KHNYNO15037 678 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-238ENST00000523298 FMR1Q06787 632 aaKnown RBP eCLIP7.99□□□□□ -1.13
CTNNA1-238ENST00000523298 ORC1Q13415 861 aa7.99□□□□□ -1.13
CTNNA1-238ENST00000523298 HIF1AQ16665 826 aa7.99□□□□□ -1.13
CTNNA1-238ENST00000523298 SLC30A3Q99726 388 aa7.99□□□□□ -1.13
CTNNA1-238ENST00000523298 NIF3L1Q9GZT8 377 aa7.99□□□□□ -1.13
CTNNA1-238ENST00000523298 WWC3Q9ULE0 1092 aa7.99□□□□□ -1.13
CTNNA1-238ENST00000523298 PCDHGC4Q9Y5F7 938 aa7.99□□□□□ -1.13
CTNNA1-238ENST00000523298 CD33P20138 364 aa7.98□□□□□ -1.13
CTNNA1-238ENST00000523298 KCNQ4P56696 695 aa7.98□□□□□ -1.13
CTNNA1-238ENST00000523298 LBRQ14739 615 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-238ENST00000523298 C8orf34Q49A92 452 aa7.98□□□□□ -1.13
CTNNA1-238ENST00000523298 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
CTNNA1-238ENST00000523298 TMEM63CQ9P1W3 806 aa7.98□□□□□ -1.13
CTNNA1-238ENST00000523298 FOXD3Q9UJU5 478 aaPredicted RBP7.98□□□□□ -1.13
CTNNA1-238ENST00000523298 CDC14CA4D256 554 aa7.97□□□□□ -1.13
CTNNA1-238ENST00000523298 CTBSQ01459 385 aa7.97□□□□□ -1.13
CTNNA1-238ENST00000523298 EHHADHQ08426 723 aa7.97□□□□□ -1.13
CTNNA1-238ENST00000523298 GAS6Q14393 721 aa7.97□□□□□ -1.13
CTNNA1-238ENST00000523298 USPL1Q5W0Q7 1092 aa7.97□□□□□ -1.13
CTNNA1-238ENST00000523298 PIK3R5Q8WYR1 880 aa7.97□□□□□ -1.13
CTNNA1-238ENST00000523298 CITED4Q96RK1 184 aa7.97□□□□□ -1.13
CTNNA1-238ENST00000523298 ZFATQ9P243 1243 aa7.97□□□□□ -1.13
CTNNA1-238ENST00000523298 C2CD2LO14523 706 aa7.96□□□□□ -1.14
CTNNA1-238ENST00000523298 RAB44Q7Z6P3 723 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-238ENST00000523298 TMC1Q8TDI8 760 aa7.96□□□□□ -1.14
CTNNA1-238ENST00000523298 CFHR5Q9BXR6 569 aa7.96□□□□□ -1.14
CTNNA1-238ENST00000523298 GSX2Q9BZM3 304 aa7.96□□□□□ -1.14
CTNNA1-238ENST00000523298 CNTN3Q9P232 1028 aa7.96□□□□□ -1.14
CTNNA1-238ENST00000523298 KCNH4Q9UQ05 1017 aa7.96□□□□□ -1.14
CTNNA1-238ENST00000523298 UBAP1LF5GYI3 381 aa7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 H7C1W4 665 aa7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 XYLBO75191 536 aa7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 SASH3O75995 380 aa7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 ZNF16P17020 682 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 TARSP26639 723 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 KRT25Q7Z3Z0 450 aa7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 ZSCAN29Q8IWY8 852 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 NANOS1Q8WY41 292 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 ALKBH8Q96BT7 664 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 CHRDQ9H2X0 955 aa7.95□□□□□ -1.14
CTNNA1-238ENST00000523298 RBM47A0AV96 593 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-238ENST00000523298 TNFRSF21O75509 655 aa7.94□□□□□ -1.14
CTNNA1-238ENST00000523298 EGFRP00533 1210 aa7.94□□□□□ -1.14
CTNNA1-238ENST00000523298 CYP2E1P05181 493 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-238ENST00000523298 FIGNL1Q6PIW4 674 aa7.94□□□□□ -1.14
CTNNA1-238ENST00000523298 GIPC2Q8TF65 315 aa7.94□□□□□ -1.14
CTNNA1-238ENST00000523298 ELP3Q9H9T3 547 aa7.94□□□□□ -1.14
CTNNA1-238ENST00000523298 ERBB4Q15303 1308 aa7.94□□□□□ -1.14
CTNNA1-238ENST00000523298 XKR5Q6UX68 686 aa7.93□□□□□ -1.14
CTNNA1-238ENST00000523298 C1orf127Q8N9H9 656 aa7.93□□□□□ -1.14
CTNNA1-238ENST00000523298 DMRTB1Q96MA1 342 aa7.93□□□□□ -1.14
CTNNA1-238ENST00000523298 BCL2L13Q9BXK5 485 aa7.93□□□□□ -1.14
CTNNA1-238ENST00000523298 NXF1Q9UBU9 619 aaKnown RBP7.93□□□□□ -1.14
CTNNA1-238ENST00000523298 H3BM21 787 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 FGFR3P22607 806 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 USP5P45974 858 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 MAPK8P45983 427 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 PLCB3Q01970 1234 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 RNFT1Q5M7Z0 435 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 ZNF787Q6DD87 383 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 FAM13BQ9NYF5 915 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 MARK1Q9P0L2 795 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 KIAA1522Q9P206 1035 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 KLF15Q9UIH9 416 aa7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 ATXN7L1Q9ULK2 861 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-238ENST00000523298 EIF1AYO14602 144 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-238ENST00000523298 MMP20O60882 483 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms