RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 USP16Q9Y5T5 823 aa8.12□□□□□ -1.11
SHPRH-210ENST00000523276 GLRX3O76003 335 aaKnown RBP8.11□□□□□ -1.11
SHPRH-210ENST00000523276 GCKRQ14397 625 aa8.11□□□□□ -1.11
SHPRH-210ENST00000523276 ANKRD13DQ6ZTN6 518 aa8.11□□□□□ -1.11
SHPRH-210ENST00000523276 CNTROBQ8N137 903 aa8.11□□□□□ -1.11
SHPRH-210ENST00000523276 CLASRPQ8N2M8 674 aaKnown RBP8.11□□□□□ -1.11
SHPRH-210ENST00000523276 GBP4Q96PP9 640 aa8.11□□□□□ -1.11
SHPRH-210ENST00000523276 MYD88Q99836 296 aa8.11□□□□□ -1.11
SHPRH-210ENST00000523276 TSPYL2Q9H2G4 693 aaPredicted RBP8.11□□□□□ -1.11
SHPRH-210ENST00000523276 PA2G4Q9UQ80 394 aaKnown RBP8.11□□□□□ -1.11
SHPRH-210ENST00000523276 ERVV-2B6SEH9 535 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 MAP4K4O95819 1239 aaPredicted RBP8.1□□□□□ -1.11
SHPRH-210ENST00000523276 GPATCH3Q96I76 525 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 CARD10Q9BWT7 1032 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 ECHDC1Q9NTX5 307 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 PALD1Q9ULE6 856 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 ERBB4Q15303 1308 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 SGSM2O43147 1006 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 TRAK2O60296 914 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 IL2RBP14784 551 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 IL25Q9H293 177 aa8.1□□□□□ -1.11
SHPRH-210ENST00000523276 CWC22Q9HCG8 908 aaKnown RBP8.1□□□□□ -1.11
SHPRH-210ENST00000523276 COL15A1P39059 1388 aa8.09□□□□□ -1.11
SHPRH-210ENST00000523276 SASH1O94885 1247 aa8.09□□□□□ -1.11
SHPRH-210ENST00000523276 IFIT2P09913 472 aaKnown RBP8.09□□□□□ -1.11
SHPRH-210ENST00000523276 PTMSP20962 102 aa8.09□□□□□ -1.11
SHPRH-210ENST00000523276 SSFA2P28290 1259 aa8.09□□□□□ -1.11
SHPRH-210ENST00000523276 MCM2P49736 904 aa8.09□□□□□ -1.11
SHPRH-210ENST00000523276 NEK4P51957 841 aa8.09□□□□□ -1.11
SHPRH-210ENST00000523276 G3BP1Q13283 466 aaKnown RBP eCLIP8.09□□□□□ -1.11
SHPRH-210ENST00000523276 CLEC17AQ6ZS10 378 aa8.09□□□□□ -1.11
SHPRH-210ENST00000523276 RAD50Q92878 1312 aa8.09□□□□□ -1.11
SHPRH-210ENST00000523276 ABCA3Q99758 1704 aa8.09□□□□□ -1.11
SHPRH-210ENST00000523276 GALR2O43603 387 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-210ENST00000523276 HSPA4P34932 840 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 PIP4K2AP48426 406 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-210ENST00000523276 NUCB2P80303 420 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 EPHA10Q5JZY3 1008 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 AACSQ86V21 672 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 IL27Q8NEV9 243 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 PLBD2Q8NHP8 589 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 WDR70Q9NW82 654 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 STK24Q9Y6E0 443 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 LAMB4A4D0S4 1761 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 KCPQ6ZWJ8 1503 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 TNS2Q63HR2 1409 aa8.08□□□□□ -1.12
SHPRH-210ENST00000523276 CYP2E1P05181 493 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-210ENST00000523276 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-210ENST00000523276 LSG1Q9H089 658 aaKnown RBP8.08□□□□□ -1.12
SHPRH-210ENST00000523276 PAPPAQ13219 1627 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 NHSL1Q5SYE7 1610 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 NBPF26B4DH59 902 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 POTEIP0CG38 1075 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 CASP7P55210 303 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 RABL6Q3YEC7 729 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-210ENST00000523276 NBPF14Q5TI25 921 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 NBPF10Q6P3W6 841 aaKnown RBP8.07□□□□□ -1.12
SHPRH-210ENST00000523276 NBPF15Q8N660 670 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 EAF2Q96CJ1 260 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-210ENST00000523276 TMX3Q96JJ7 454 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 COPRSQ9NQ92 184 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 STRN4Q9NRL3 753 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 PLSCR2Q9NRY7 297 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-210ENST00000523276 BAG4O95429 457 aaKnown RBP8.07□□□□□ -1.12
SHPRH-210ENST00000523276 RFX5P48382 616 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-210ENST00000523276 CLCN6P51797 869 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 EVA1CP58658 441 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 CUL4AQ13619 759 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 SKOR2Q2VWA4 1001 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-210ENST00000523276 CWC27Q6UX04 472 aaKnown RBP8.07□□□□□ -1.12
SHPRH-210ENST00000523276 ZGPATQ8N5A5 531 aaKnown RBP8.07□□□□□ -1.12
SHPRH-210ENST00000523276 RUFY2Q8WXA3 655 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 EVI5LQ96CN4 794 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 SIL1Q9H173 461 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 DIAPH3Q9NSV4 1193 aa8.07□□□□□ -1.12
SHPRH-210ENST00000523276 UBR2Q8IWV8 1755 aa8.06□□□□□ -1.12
SHPRH-210ENST00000523276 A0A087WZG4 1122 aa8.06□□□□□ -1.12
SHPRH-210ENST00000523276 ATP5J2-PTCD1G3V325 749 aa8.06□□□□□ -1.12
SHPRH-210ENST00000523276 PTCD1O75127 700 aaKnown RBP8.06□□□□□ -1.12
SHPRH-210ENST00000523276 L1TD1Q5T7N2 865 aaKnown RBP8.06□□□□□ -1.12
SHPRH-210ENST00000523276 UBE3BQ7Z3V4 1068 aa8.06□□□□□ -1.12
SHPRH-210ENST00000523276 KLHDC4Q8TBB5 520 aa8.06□□□□□ -1.12
SHPRH-210ENST00000523276 DDX54Q8TDD1 881 aaKnown RBP8.06□□□□□ -1.12
SHPRH-210ENST00000523276 CCDC8Q9H0W5 538 aaPredicted RBP8.06□□□□□ -1.12
SHPRH-210ENST00000523276 TLR7Q9NYK1 1049 aaKnown RBP8.06□□□□□ -1.12
SHPRH-210ENST00000523276 FSD2A1L4K1 749 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 GOLGA6L22H0YM25 854 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 PTPN12Q05209 780 aaKnown RBP8.05□□□□□ -1.12
SHPRH-210ENST00000523276 TTLL7Q6ZT98 887 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 KIAA1211Q6ZU35 1233 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 JARID2Q92833 1246 aaPredicted RBP8.05□□□□□ -1.12
SHPRH-210ENST00000523276 KIF12Q96FN5 646 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 GZF1Q9H116 711 aaPredicted RBP8.05□□□□□ -1.12
SHPRH-210ENST00000523276 SNX14Q9Y5W7 946 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 SHANK3Q9BYB0 1731 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 ARFGEF2Q9Y6D5 1785 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 H7C1W4 665 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 HIP1O00291 1037 aa8.05□□□□□ -1.12
SHPRH-210ENST00000523276 PKP1Q13835 747 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms