RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 BCORQ6W2J9 1755 aa8.38□□□□□ -1.07
PVT1-217ENST00000523190 C4BP0C0L5 1744 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 ERVV-1B6SEH8 477 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 GPTP24298 496 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 PDE4AP27815 886 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 CASP7P55210 303 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 NUCB1Q02818 461 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 RTL5Q5HYW3 569 aaPredicted RBP8.37□□□□□ -1.07
PVT1-217ENST00000523190 EPHA10Q5JZY3 1008 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 ANKRD45Q5TZF3 282 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 CHD1LQ86WJ1 897 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 CCDC191Q8NCU4 936 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 KAZALD1Q96I82 304 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 LNPKQ9C0E8 428 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 BICC1Q9H694 974 aaKnown RBP8.37□□□□□ -1.07
PVT1-217ENST00000523190 DCTPP1Q9H773 170 aa8.37□□□□□ -1.07
PVT1-217ENST00000523190 H7C1W4 665 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 APBB1O00213 710 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 GNPATO15228 680 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 SRGAP3O43295 1099 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 RPS6KA4O75676 772 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 ECM2O94769 699 aaPredicted RBP8.36□□□□□ -1.07
PVT1-217ENST00000523190 CAMTA2O94983 1202 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 MTX1Q13505 466 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 HSP90AB3PQ58FF7 597 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 RC3H1Q5TC82 1133 aaKnown RBP8.36□□□□□ -1.07
PVT1-217ENST00000523190 SSH3Q8TE77 659 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 LRRC4BQ9NT99 713 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 HDAC5Q9UQL6 1122 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 EXOC6BQ9Y2D4 811 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 SCN7AQ01118 1682 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 NUP98P52948 1817 aa8.36□□□□□ -1.07
PVT1-217ENST00000523190 UBN2Q6ZU65 1347 aa8.35□□□□□ -1.07
PVT1-217ENST00000523190 TNS1Q9HBL0 1735 aaKnown RBP8.35□□□□□ -1.07
PVT1-217ENST00000523190 SMARCA5O60264 1052 aaPredicted RBP8.35□□□□□ -1.07
PVT1-217ENST00000523190 NLRP10Q86W26 655 aa8.35□□□□□ -1.07
PVT1-217ENST00000523190 AK7Q96M32 723 aa8.35□□□□□ -1.07
PVT1-217ENST00000523190 BCL11AQ9H165 835 aa8.35□□□□□ -1.07
PVT1-217ENST00000523190 ZBTB47Q9UFB7 747 aaPredicted RBP8.35□□□□□ -1.07
PVT1-217ENST00000523190 SURF6O75683 361 aaKnown RBP8.34□□□□□ -1.07
PVT1-217ENST00000523190 APBA3O96018 575 aa8.34□□□□□ -1.07
PVT1-217ENST00000523190 PCCAP05165 728 aaPredicted RBP8.34□□□□□ -1.07
PVT1-217ENST00000523190 TRIM28Q13263 835 aaKnown RBP8.34□□□□□ -1.07
PVT1-217ENST00000523190 TXNRD1Q16881 649 aa8.34□□□□□ -1.07
PVT1-217ENST00000523190 RABL6Q3YEC7 729 aaPredicted RBP8.34□□□□□ -1.07
PVT1-217ENST00000523190 AMIGO3Q86WK7 504 aa8.34□□□□□ -1.07
PVT1-217ENST00000523190 ZNF34Q8IZ26 560 aa8.34□□□□□ -1.07
PVT1-217ENST00000523190 RNF39Q9H2S5 420 aa8.34□□□□□ -1.07
PVT1-217ENST00000523190 TSHZ2Q9NRE2 1034 aa8.34□□□□□ -1.07
PVT1-217ENST00000523190 SRP68Q9UHB9 627 aaKnown RBP8.34□□□□□ -1.07
PVT1-217ENST00000523190 PA2G4Q9UQ80 394 aaKnown RBP8.34□□□□□ -1.07
PVT1-217ENST00000523190 RTCBQ9Y3I0 505 aaKnown RBP8.34□□□□□ -1.07
PVT1-217ENST00000523190 C4AP0C0L4 1744 aa8.34□□□□□ -1.07
PVT1-217ENST00000523190 FAM177BA6PVY3 158 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 PHF14O94880 888 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 FOXO4P98177 505 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 SLC27A3Q5K4L6 730 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 LMBR1LQ6UX01 489 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 SYNE4Q8N205 404 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 ZBTB38Q8NAP3 1195 aaPredicted RBP8.33□□□□□ -1.08
PVT1-217ENST00000523190 FAM89AQ96GI7 184 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
PVT1-217ENST00000523190 ZNF652Q9Y2D9 606 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 CHMP3Q9Y3E7 222 aa8.33□□□□□ -1.08
PVT1-217ENST00000523190 CDHR2Q9BYE9 1310 aa8.32□□□□□ -1.08
PVT1-217ENST00000523190 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
PVT1-217ENST00000523190 RFX5P48382 616 aaPredicted RBP8.32□□□□□ -1.08
PVT1-217ENST00000523190 OS9Q13438 667 aaPredicted RBP8.32□□□□□ -1.08
PVT1-217ENST00000523190 SUSD4Q5VX71 490 aa8.32□□□□□ -1.08
PVT1-217ENST00000523190 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
PVT1-217ENST00000523190 PLCD3Q8N3E9 789 aa8.32□□□□□ -1.08
PVT1-217ENST00000523190 KLHDC4Q8TBB5 520 aa8.32□□□□□ -1.08
PVT1-217ENST00000523190 OTUD7AQ8TE49 926 aaPredicted RBP8.32□□□□□ -1.08
PVT1-217ENST00000523190 ARHGEF1Q92888 912 aaKnown RBP8.32□□□□□ -1.08
PVT1-217ENST00000523190 LRRCC1Q9C099 1032 aa8.32□□□□□ -1.08
PVT1-217ENST00000523190 BCL2L12Q9HB09 334 aa8.32□□□□□ -1.08
PVT1-217ENST00000523190 NARFQ9UHQ1 456 aa8.32□□□□□ -1.08
PVT1-217ENST00000523190 NIP7Q9Y221 180 aaKnown RBP eCLIP8.32□□□□□ -1.08
PVT1-217ENST00000523190 NOP58Q9Y2X3 529 aaKnown RBP8.32□□□□□ -1.08
PVT1-217ENST00000523190 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
PVT1-217ENST00000523190 IRS4O14654 1257 aaPredicted RBP8.31□□□□□ -1.08
PVT1-217ENST00000523190 PLSCR1O15162 318 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 NTSR2O95665 410 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 PARP10Q53GL7 1025 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 HSP90AB4PQ58FF6 505 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 TRAPPC3LQ5T215 181 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 TBC1D9BQ66K14 1250 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 BICDL1Q6ZP65 573 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 RHPN1Q8TCX5 695 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 KIF1BPQ96EK5 621 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 CCDC85AQ96PX6 553 aaPredicted RBP8.31□□□□□ -1.08
PVT1-217ENST00000523190 UTP14AQ9BVJ6 771 aaKnown RBP8.31□□□□□ -1.08
PVT1-217ENST00000523190 PLA2G12BQ9BX93 195 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 SIL1Q9H173 461 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 IL1RAPL2Q9NP60 686 aa8.31□□□□□ -1.08
PVT1-217ENST00000523190 USP42Q9H9J4 1324 aaKnown RBP8.3□□□□□ -1.08
PVT1-217ENST00000523190 RGPD3A6NKT7 1758 aaPredicted RBP8.3□□□□□ -1.08
PVT1-217ENST00000523190 RGPD4Q7Z3J3 1758 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms