RNA–Protein interactions for RNA: ENST00000523155.1

IGKV3-25-201, Transcript of immunoglobulin kappa variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGKV3-25, Length 253 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-25-201ENST00000523155 SENP3-EIF4A1A0A087X0R7 540 aa11.55□□□□□ -0.56
IGKV3-25-201ENST00000523155 PRELPP51888 382 aa11.55□□□□□ -0.56
IGKV3-25-201ENST00000523155 CRY2Q49AN0 593 aa11.55□□□□□ -0.56
IGKV3-25-201ENST00000523155 CCDC93Q567U6 631 aa11.55□□□□□ -0.56
IGKV3-25-201ENST00000523155 DBF4Q9UBU7 674 aaPredicted RBP11.55□□□□□ -0.56
IGKV3-25-201ENST00000523155 TAF1P21675 1872 aa11.55□□□□□ -0.56
IGKV3-25-201ENST00000523155 CCDC27Q2M243 656 aa11.54□□□□□ -0.56
IGKV3-25-201ENST00000523155 RPGRQ92834 1020 aaKnown RBP11.54□□□□□ -0.56
IGKV3-25-201ENST00000523155 NMRK2Q9NPI5 230 aa11.54□□□□□ -0.56
IGKV3-25-201ENST00000523155 LRRC37AA6NMS7 1700 aa11.54□□□□□ -0.56
IGKV3-25-201ENST00000523155 PLBD2Q8NHP8 589 aa11.53□□□□□ -0.56
IGKV3-25-201ENST00000523155 C7orf43Q8WVR3 580 aa11.53□□□□□ -0.56
IGKV3-25-201ENST00000523155 UTP14AQ9BVJ6 771 aaKnown RBP11.53□□□□□ -0.56
IGKV3-25-201ENST00000523155 HYPKQ9NX55 129 aa11.53□□□□□ -0.56
IGKV3-25-201ENST00000523155 SCN4AP35499 1836 aa11.53□□□□□ -0.56
IGKV3-25-201ENST00000523155 SNED1Q8TER0 1413 aa11.52□□□□□ -0.56
IGKV3-25-201ENST00000523155 ALDH1B1P30837 517 aa11.52□□□□□ -0.57
IGKV3-25-201ENST00000523155 TCIRG1Q13488 830 aa11.52□□□□□ -0.57
IGKV3-25-201ENST00000523155 NLRP10Q86W26 655 aa11.52□□□□□ -0.57
IGKV3-25-201ENST00000523155 HOXA10P31260 410 aaPredicted RBP11.51□□□□□ -0.57
IGKV3-25-201ENST00000523155 FKBP4Q02790 459 aaKnown RBP eCLIP11.51□□□□□ -0.57
IGKV3-25-201ENST00000523155 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
IGKV3-25-201ENST00000523155 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
IGKV3-25-201ENST00000523155 WWC1Q8IX03 1113 aa11.51□□□□□ -0.57
IGKV3-25-201ENST00000523155 C16orf71Q8IYS4 520 aaPredicted RBP11.51□□□□□ -0.57
IGKV3-25-201ENST00000523155 CHMP4AQ9BY43 222 aa11.51□□□□□ -0.57
IGKV3-25-201ENST00000523155 IL16Q14005 1332 aa11.51□□□□□ -0.57
IGKV3-25-201ENST00000523155 SH3TC1Q8TE82 1336 aa11.51□□□□□ -0.57
IGKV3-25-201ENST00000523155 GLTPD2A6NH11 291 aa11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 ELL2O00472 640 aaPredicted RBP11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 TOMM70O94826 608 aa11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 C3orf67Q6ZVT6 689 aa11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 RTKN2Q8IZC4 609 aa11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 C8orf58Q8NAV2 365 aa11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 TSR2Q969E8 191 aaKnown RBP11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 RBM17Q96I25 401 aaKnown RBP11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 NLRP3Q96P20 1036 aa11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 CRAMP1Q96RY5 1269 aa11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 SPEF2Q9C093 1822 aa11.5□□□□□ -0.57
IGKV3-25-201ENST00000523155 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
IGKV3-25-201ENST00000523155 HSPA6P17066 643 aa11.49□□□□□ -0.57
IGKV3-25-201ENST00000523155 SLC10A5Q5PT55 438 aa11.49□□□□□ -0.57
IGKV3-25-201ENST00000523155 CCDC30Q5VVM6 783 aa11.49□□□□□ -0.57
IGKV3-25-201ENST00000523155 CC2D2BQ6DHV5 1058 aa11.49□□□□□ -0.57
IGKV3-25-201ENST00000523155 OLFM4Q6UX06 510 aa11.49□□□□□ -0.57
IGKV3-25-201ENST00000523155 RBM46Q8TBY0 533 aaKnown RBP11.49□□□□□ -0.57
IGKV3-25-201ENST00000523155 ISCA1Q9BUE6 129 aa11.49□□□□□ -0.57
IGKV3-25-201ENST00000523155 TRMT112Q9UI30 125 aaKnown RBP11.49□□□□□ -0.57
IGKV3-25-201ENST00000523155 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
IGKV3-25-201ENST00000523155 RIC3Q7Z5B4 369 aa11.48□□□□□ -0.57
IGKV3-25-201ENST00000523155 TSPYL6Q8N831 410 aa11.48□□□□□ -0.57
IGKV3-25-201ENST00000523155 PSMD1Q99460 953 aa11.48□□□□□ -0.57
IGKV3-25-201ENST00000523155 PHAXQ9H814 394 aaKnown RBP11.48□□□□□ -0.57
IGKV3-25-201ENST00000523155 RRAGCQ9HB90 399 aa11.48□□□□□ -0.57
IGKV3-25-201ENST00000523155 ZNF277Q9NRM2 450 aaPredicted RBP11.48□□□□□ -0.57
IGKV3-25-201ENST00000523155 ABCC4O15439 1325 aa11.48□□□□□ -0.57
IGKV3-25-201ENST00000523155 FANCIQ9NVI1 1328 aa11.48□□□□□ -0.57
IGKV3-25-201ENST00000523155 LTBP1Q14766 1721 aa11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 COL4A5P29400 1685 aa11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 ATP5J2-PTCD1G3V325 749 aa11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 HCLS1P14317 486 aaPredicted RBP11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 IARSP41252 1262 aaKnown RBP11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 TWISTNBQ3B726 338 aaPredicted RBP11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 GRIPAP1Q4V328 841 aa11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 FAM9BQ8IZU0 186 aa11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 STK31Q9BXU1 1019 aa11.47□□□□□ -0.57
IGKV3-25-201ENST00000523155 COL4A1P02462 1669 aa11.46□□□□□ -0.57
IGKV3-25-201ENST00000523155 DUOX1Q9NRD9 1551 aa11.46□□□□□ -0.57
IGKV3-25-201ENST00000523155 VEGFAP15692 232 aaPredicted RBP11.46□□□□□ -0.57
IGKV3-25-201ENST00000523155 WDR63Q8IWG1 891 aa11.46□□□□□ -0.57
IGKV3-25-201ENST00000523155 SYNE4Q8N205 404 aa11.46□□□□□ -0.57
IGKV3-25-201ENST00000523155 ZNF428Q96B54 188 aa11.46□□□□□ -0.57
IGKV3-25-201ENST00000523155 ZNF541Q9H0D2 1346 aa11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 FSTL1Q12841 308 aa11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 TRIM28Q13263 835 aaKnown RBP11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 GRAPQ13588 217 aa11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 DDX46Q7L014 1031 aaKnown RBP11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 SLC51AQ86UW1 340 aa11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 GRAPLQ8TC17 118 aaPredicted RBP11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 FAM89AQ96GI7 184 aa11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 MYD88Q99836 296 aa11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 TMX4Q9H1E5 349 aaPredicted RBP11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 ADAMTSL1Q8N6G6 1762 aa11.45□□□□□ -0.58
IGKV3-25-201ENST00000523155 TCERG1O14776 1098 aaKnown RBP11.44□□□□□ -0.58
IGKV3-25-201ENST00000523155 DDNO94850 711 aaPredicted RBP11.44□□□□□ -0.58
IGKV3-25-201ENST00000523155 SMC1BQ8NDV3 1235 aa11.44□□□□□ -0.58
IGKV3-25-201ENST00000523155 ATP6V0A2Q9Y487 856 aa11.44□□□□□ -0.58
IGKV3-25-201ENST00000523155 POTECB2RU33 542 aa11.43□□□□□ -0.58
IGKV3-25-201ENST00000523155 IRS4O14654 1257 aaPredicted RBP11.43□□□□□ -0.58
IGKV3-25-201ENST00000523155 HSP90B1P14625 803 aaKnown RBP11.43□□□□□ -0.58
IGKV3-25-201ENST00000523155 APLP1P51693 650 aa11.43□□□□□ -0.58
IGKV3-25-201ENST00000523155 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
IGKV3-25-201ENST00000523155 TMC4Q7Z404 712 aa11.43□□□□□ -0.58
IGKV3-25-201ENST00000523155 ZBTB38Q8NAP3 1195 aaPredicted RBP11.43□□□□□ -0.58
IGKV3-25-201ENST00000523155 CCDC191Q8NCU4 936 aa11.43□□□□□ -0.58
IGKV3-25-201ENST00000523155 JDP2Q8WYK2 163 aa11.43□□□□□ -0.58
IGKV3-25-201ENST00000523155 L3MBTL3Q96JM7 780 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms