RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 FOXO3O43524 673 aa10.3□□□□□ -0.76
SDCBP-210ENST00000522843 YY1P25490 414 aa10.3□□□□□ -0.76
SDCBP-210ENST00000522843 CTSOP43234 321 aaPredicted RBP10.3□□□□□ -0.76
SDCBP-210ENST00000522843 R3HDM1Q15032 1099 aaKnown RBP10.3□□□□□ -0.76
SDCBP-210ENST00000522843 ZBTB33Q86T24 672 aa10.3□□□□□ -0.76
SDCBP-210ENST00000522843 WHAMMQ8TF30 809 aa10.3□□□□□ -0.76
SDCBP-210ENST00000522843 AGBL1Q96MI9 1066 aa10.3□□□□□ -0.76
SDCBP-210ENST00000522843 FKBPLQ9UIM3 349 aa10.3□□□□□ -0.76
SDCBP-210ENST00000522843 NPHP3Q7Z494 1330 aa10.3□□□□□ -0.76
SDCBP-210ENST00000522843 USP32Q8NFA0 1604 aa10.29□□□□□ -0.76
SDCBP-210ENST00000522843 CDC14CA4D256 554 aa10.29□□□□□ -0.76
SDCBP-210ENST00000522843 ARHGEF15O94989 841 aa10.29□□□□□ -0.76
SDCBP-210ENST00000522843 RELBQ01201 579 aa10.29□□□□□ -0.76
SDCBP-210ENST00000522843 VPS72Q15906 364 aa10.29□□□□□ -0.76
SDCBP-210ENST00000522843 ESCO1Q5FWF5 840 aa10.29□□□□□ -0.76
SDCBP-210ENST00000522843 KRT27Q7Z3Y8 459 aa10.29□□□□□ -0.76
SDCBP-210ENST00000522843 POLR3EQ9NVU0 708 aa10.29□□□□□ -0.76
SDCBP-210ENST00000522843 ZNF326Q5BKZ1 582 aaKnown RBP10.28□□□□□ -0.76
SDCBP-210ENST00000522843 INSM2Q96T92 566 aaPredicted RBP10.28□□□□□ -0.76
SDCBP-210ENST00000522843 CDC42BPGQ6DT37 1551 aa10.27□□□□□ -0.76
SDCBP-210ENST00000522843 BAG6P46379 1132 aa10.27□□□□□ -0.77
SDCBP-210ENST00000522843 INTS6LQ5JSJ4 861 aaKnown RBP10.27□□□□□ -0.77
SDCBP-210ENST00000522843 POLMQ9NP87 494 aaPredicted RBP10.27□□□□□ -0.77
SDCBP-210ENST00000522843 PLCH1Q4KWH8 1693 aa10.27□□□□□ -0.77
SDCBP-210ENST00000522843 SPATA31A3Q5VYP0 1347 aa10.27□□□□□ -0.77
SDCBP-210ENST00000522843 NUP155O75694 1391 aa10.26□□□□□ -0.77
SDCBP-210ENST00000522843 CLTCL1P53675 1640 aa10.26□□□□□ -0.77
SDCBP-210ENST00000522843 LOC105371045A0A1W2PR82 267 aa10.26□□□□□ -0.77
SDCBP-210ENST00000522843 IRS1P35568 1242 aa10.26□□□□□ -0.77
SDCBP-210ENST00000522843 MARSP56192 900 aaKnown RBP10.26□□□□□ -0.77
SDCBP-210ENST00000522843 LRRN4Q8WUT4 740 aa10.26□□□□□ -0.77
SDCBP-210ENST00000522843 DNMT3AQ9Y6K1 912 aaPredicted RBP10.26□□□□□ -0.77
SDCBP-210ENST00000522843 ZC3H4Q9UPT8 1303 aaKnown RBP10.26□□□□□ -0.77
SDCBP-210ENST00000522843 HFM1A2PYH4 1435 aa10.25□□□□□ -0.77
SDCBP-210ENST00000522843 TNS1Q9HBL0 1735 aaKnown RBP10.25□□□□□ -0.77
SDCBP-210ENST00000522843 NWD2Q9ULI1 1742 aa10.25□□□□□ -0.77
SDCBP-210ENST00000522843 FAM50AQ14320 339 aaKnown RBP10.25□□□□□ -0.77
SDCBP-210ENST00000522843 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
SDCBP-210ENST00000522843 RNF217Q8TC41 542 aa10.25□□□□□ -0.77
SDCBP-210ENST00000522843 ZNF395Q9H8N7 513 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-210ENST00000522843 UTRNP46939 3433 aa10.25□□□□□ -0.77
SDCBP-210ENST00000522843 DISP2A7MBM2 1401 aa10.24□□□□□ -0.77
SDCBP-210ENST00000522843 RGPD1P0DJD0 1748 aa10.24□□□□□ -0.77
SDCBP-210ENST00000522843 IGHA1P01876 353 aa10.24□□□□□ -0.77
SDCBP-210ENST00000522843 PTK2Q05397 1052 aa10.24□□□□□ -0.77
SDCBP-210ENST00000522843 EZH2Q15910 746 aaKnown RBP10.24□□□□□ -0.77
SDCBP-210ENST00000522843 KANK3Q6NY19 840 aa10.24□□□□□ -0.77
SDCBP-210ENST00000522843 SENP3-EIF4A1A0A087X0R7 540 aa10.23□□□□□ -0.77
SDCBP-210ENST00000522843 NR6A1Q15406 480 aa10.23□□□□□ -0.77
SDCBP-210ENST00000522843 GPAT2Q6NUI2 795 aa10.23□□□□□ -0.77
SDCBP-210ENST00000522843 SCARF2Q96GP6 870 aaPredicted RBP10.23□□□□□ -0.77
SDCBP-210ENST00000522843 GPSM3Q9Y4H4 160 aa10.23□□□□□ -0.77
SDCBP-210ENST00000522843 ABCA3Q99758 1704 aa10.23□□□□□ -0.77
SDCBP-210ENST00000522843 NAIPQ13075 1403 aa10.23□□□□□ -0.77
SDCBP-210ENST00000522843 NRAPQ86VF7 1730 aa10.22□□□□□ -0.77
SDCBP-210ENST00000522843 FAM83GA6ND36 823 aa10.22□□□□□ -0.77
SDCBP-210ENST00000522843 CAMKK2Q96RR4 588 aa10.22□□□□□ -0.77
SDCBP-210ENST00000522843 OCSTAMPQ9BR26 566 aa10.22□□□□□ -0.77
SDCBP-210ENST00000522843 ROCK1Q13464 1354 aa10.22□□□□□ -0.77
SDCBP-210ENST00000522843 FOXK2Q01167 660 aa10.21□□□□□ -0.77
SDCBP-210ENST00000522843 ADAM32Q8TC27 787 aa10.21□□□□□ -0.77
SDCBP-210ENST00000522843 GPBP1L1Q9HC44 474 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-210ENST00000522843 TMPRSS4Q9NRS4 437 aa10.21□□□□□ -0.77
SDCBP-210ENST00000522843 CCDC9Q9Y3X0 531 aaKnown RBP10.21□□□□□ -0.77
SDCBP-210ENST00000522843 LRPPRCP42704 1394 aaKnown RBP10.21□□□□□ -0.78
SDCBP-210ENST00000522843 SRSF11Q05519 484 aaKnown RBP10.2□□□□□ -0.78
SDCBP-210ENST00000522843 NBPF20Q3BBV1 942 aa10.2□□□□□ -0.78
SDCBP-210ENST00000522843 TNS3Q68CZ2 1445 aa10.2□□□□□ -0.78
SDCBP-210ENST00000522843 LYPD4Q6UWN0 246 aa10.2□□□□□ -0.78
SDCBP-210ENST00000522843 KRT28Q7Z3Y7 464 aa10.2□□□□□ -0.78
SDCBP-210ENST00000522843 WAPLQ7Z5K2 1190 aa10.2□□□□□ -0.78
SDCBP-210ENST00000522843 PLEKHH1Q9ULM0 1364 aa10.2□□□□□ -0.78
SDCBP-210ENST00000522843 FMN2Q9NZ56 1722 aa10.19□□□□□ -0.78
SDCBP-210ENST00000522843 THSD7AQ9UPZ6 1657 aa10.19□□□□□ -0.78
SDCBP-210ENST00000522843 CCDC144AA2RUR9 1427 aa10.19□□□□□ -0.78
SDCBP-210ENST00000522843 ZNF784Q8NCA9 323 aaPredicted RBP10.19□□□□□ -0.78
SDCBP-210ENST00000522843 KIF1AQ12756 1690 aa10.18□□□□□ -0.78
SDCBP-210ENST00000522843 CAMTA1Q9Y6Y1 1673 aa10.18□□□□□ -0.78
SDCBP-210ENST00000522843 ADH1AP07327 375 aa10.18□□□□□ -0.78
SDCBP-210ENST00000522843 PTGIRP43119 386 aa10.18□□□□□ -0.78
SDCBP-210ENST00000522843 MAP3K10Q02779 954 aa10.18□□□□□ -0.78
SDCBP-210ENST00000522843 KIF1BO60333 1816 aa10.18□□□□□ -0.78
SDCBP-210ENST00000522843 RREB1Q92766 1687 aa10.18□□□□□ -0.78
SDCBP-210ENST00000522843 TECPR2O15040 1411 aa10.17□□□□□ -0.78
SDCBP-210ENST00000522843 NUP188Q5SRE5 1749 aa10.17□□□□□ -0.78
SDCBP-210ENST00000522843 ADD1P35611 737 aaKnown RBP10.17□□□□□ -0.78
SDCBP-210ENST00000522843 SKIV2LQ15477 1246 aaKnown RBP10.17□□□□□ -0.78
SDCBP-210ENST00000522843 FOXD4L5Q5VV16 416 aaPredicted RBP10.17□□□□□ -0.78
SDCBP-210ENST00000522843 LYSMD3Q7Z3D4 306 aa10.17□□□□□ -0.78
SDCBP-210ENST00000522843 RGPD8O14715 1765 aaPredicted RBP10.16□□□□□ -0.78
SDCBP-210ENST00000522843 PPLO60437 1756 aa10.16□□□□□ -0.78
SDCBP-210ENST00000522843 SPATA31A5Q5VU36 1347 aa10.16□□□□□ -0.78
SDCBP-210ENST00000522843 SPATA31A7Q8IWB4 1347 aa10.16□□□□□ -0.78
SDCBP-210ENST00000522843 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
SDCBP-210ENST00000522843 LILRA1O75019 489 aa10.16□□□□□ -0.78
SDCBP-210ENST00000522843 CELA2BP08218 269 aaPredicted RBP10.16□□□□□ -0.78
SDCBP-210ENST00000522843 RAB15P59190 212 aa10.16□□□□□ -0.78
SDCBP-210ENST00000522843 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
SDCBP-210ENST00000522843 TRIM37O94972 964 aa10.15□□□□□ -0.78
SDCBP-210ENST00000522843 PPP2R2DQ66LE6 453 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms