RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 UBE3BQ7Z3V4 1068 aa12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 RFX5P48382 616 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 RPAP1Q9BWH6 1393 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 LARGE1O95461 756 aa12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 DDX54Q8TDD1 881 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP1-204ENST00000522774 PTPN12Q05209 780 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP1-204ENST00000522774 JAKMIP1Q96N16 626 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP1-204ENST00000522774 TMEM63CQ9P1W3 806 aa12.96□□□□□ -0.33
RAB11FIP1-204ENST00000522774 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.34
RAB11FIP1-204ENST00000522774 A0A0D9SFI3 127 aa12.96□□□□□ -0.34
RAB11FIP1-204ENST00000522774 EDC3Q96F86 508 aaKnown RBP12.96□□□□□ -0.34
RAB11FIP1-204ENST00000522774 COPRSQ9NQ92 184 aa12.96□□□□□ -0.34
RAB11FIP1-204ENST00000522774 PRDM11Q9NQV5 511 aa12.96□□□□□ -0.34
RAB11FIP1-204ENST00000522774 LIMCH1Q9UPQ0 1083 aa12.96□□□□□ -0.34
RAB11FIP1-204ENST00000522774 LAMB4A4D0S4 1761 aa12.96□□□□□ -0.34
RAB11FIP1-204ENST00000522774 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 DTNBO60941 627 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 NECTIN1Q15223 517 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 KCNB2Q92953 911 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 RBM8AQ9Y5S9 174 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 A0A087WZG4 1122 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 NASPP49321 788 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 TOM1L2Q6ZVM7 507 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
RAB11FIP1-204ENST00000522774 CASP7P55210 303 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 TFCP2Q12800 502 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 RABL6Q3YEC7 729 aaPredicted RBP12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 PLBD2Q8NHP8 589 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ZCRB1Q8TBF4 217 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 CREB3L3Q68CJ9 461 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 TTLL7Q6ZT98 887 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 MAP4K1Q92918 833 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 PDRG1Q9NUG6 133 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
RAB11FIP1-204ENST00000522774 HIP1O00291 1037 aa12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 TNNI3KQ59H18 835 aa12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 FPGT-TNNI3KV9GXZ4 949 aa12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 TCHHQ07283 1943 aa12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ZNF589Q86UQ0 364 aaPredicted RBP12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 TM6SF1Q9BZW5 370 aa12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 RBSNQ9H1K0 784 aa12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 SNRKQ9NRH2 765 aa12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 TAF6LQ9Y6J9 622 aa12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 COL5A2P05997 1499 aaPredicted RBP12.93□□□□□ -0.34
RAB11FIP1-204ENST00000522774 KCNJ4P48050 445 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 VPS53Q5VIR6 699 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 CCDC83Q8IWF9 413 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 CYP46A1Q9Y6A2 500 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ERBB4Q15303 1308 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 COL15A1P39059 1388 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 MED23Q9ULK4 1368 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 SLC27A2O14975 620 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 GADD45BO75293 160 aaPredicted RBP12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 A1BGP04217 495 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 LMBR1LQ6UX01 489 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 SYCE3A1L190 88 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 CHGBP05060 677 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 SYT1P21579 422 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ST3GAL1Q11201 340 aa12.92□□□□□ -0.34
RAB11FIP1-204ENST00000522774 UBR2Q8IWV8 1755 aa12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 KCPQ6ZWJ8 1503 aa12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 MBD3O95983 291 aa12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 DBNDD2Q9BQY9 259 aa12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 SOS2Q07890 1332 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ZKSCAN1P17029 563 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ATP5JP18859 108 aa12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 FOXO4P98177 505 aa12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 USP48Q86UV5 1035 aa12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP1-204ENST00000522774 STX6O43752 255 aa12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ZSCAN22P10073 491 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 NUP188Q5SRE5 1749 aa12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 H7C1W4 665 aa12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 ME3Q16798 604 aa12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 STRN4Q9NRL3 753 aa12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 SLAIN2Q9P270 581 aa12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 CHMP3Q9Y3E7 222 aa12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.34
RAB11FIP1-204ENST00000522774 CCDC173Q0VFZ6 552 aa12.9□□□□□ -0.35
RAB11FIP1-204ENST00000522774 LRSAM1Q6UWE0 723 aa12.9□□□□□ -0.35
RAB11FIP1-204ENST00000522774 NECAB1Q8N987 351 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms