RNA–Protein interactions for RNA: ENST00000522416.1

AP003550.1-201, humanhuman

TSL 3 BASIC

Gene AP003550.1, Length 414 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003550.1-201ENST00000522416 HCLS1P14317 486 aaPredicted RBP13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 NPR1P16066 1061 aa13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 TCIRG1Q13488 830 aa13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 RTL5Q5HYW3 569 aaPredicted RBP13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 NLRP10Q86W26 655 aa13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 UTP14AQ9BVJ6 771 aaKnown RBP13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 HYPKQ9NX55 129 aa13.62□□□□□ -0.23
AP003550.1-201ENST00000522416 PLBD2Q8NHP8 589 aa13.61□□□□□ -0.23
AP003550.1-201ENST00000522416 PDZRN3Q9UPQ7 1066 aa13.61□□□□□ -0.23
AP003550.1-201ENST00000522416 KLRG2A4D1S0 409 aaPredicted RBP13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 TWISTNBQ3B726 338 aaPredicted RBP13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 PARP10Q53GL7 1025 aa13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 CCDC30Q5VVM6 783 aa13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 RIC3Q7Z5B4 369 aa13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 RPGRQ92834 1020 aaKnown RBP13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 IL16Q14005 1332 aa13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
AP003550.1-201ENST00000522416 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
AP003550.1-201ENST00000522416 EXOSC9Q06265 439 aaKnown RBP13.59□□□□□ -0.23
AP003550.1-201ENST00000522416 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
AP003550.1-201ENST00000522416 HSP90AB3PQ58FF7 597 aa13.59□□□□□ -0.23
AP003550.1-201ENST00000522416 G2E3Q7L622 706 aa13.59□□□□□ -0.23
AP003550.1-201ENST00000522416 MYD88Q99836 296 aa13.59□□□□□ -0.23
AP003550.1-201ENST00000522416 WDR63Q8IWG1 891 aa13.58□□□□□ -0.24
AP003550.1-201ENST00000522416 FAM89AQ96GI7 184 aa13.58□□□□□ -0.24
AP003550.1-201ENST00000522416 NMRK2Q9NPI5 230 aa13.58□□□□□ -0.24
AP003550.1-201ENST00000522416 LMNB1P20700 586 aa13.57□□□□□ -0.24
AP003550.1-201ENST00000522416 CRY2Q49AN0 593 aa13.57□□□□□ -0.24
AP003550.1-201ENST00000522416 C7orf43Q8WVR3 580 aa13.57□□□□□ -0.24
AP003550.1-201ENST00000522416 ISCA1Q9BUE6 129 aa13.57□□□□□ -0.24
AP003550.1-201ENST00000522416 STK31Q9BXU1 1019 aa13.57□□□□□ -0.24
AP003550.1-201ENST00000522416 COL4A1P02462 1669 aa13.56□□□□□ -0.24
AP003550.1-201ENST00000522416 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
AP003550.1-201ENST00000522416 RBM17Q96I25 401 aaKnown RBP13.56□□□□□ -0.24
AP003550.1-201ENST00000522416 NLRP3Q96P20 1036 aa13.56□□□□□ -0.24
AP003550.1-201ENST00000522416 TAOK3Q9H2K8 898 aa13.56□□□□□ -0.24
AP003550.1-201ENST00000522416 ZNF277Q9NRM2 450 aaPredicted RBP13.56□□□□□ -0.24
AP003550.1-201ENST00000522416 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
AP003550.1-201ENST00000522416 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
AP003550.1-201ENST00000522416 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
AP003550.1-201ENST00000522416 SPEF2Q9C093 1822 aa13.55□□□□□ -0.24
AP003550.1-201ENST00000522416 VAMP4O75379 141 aa13.55□□□□□ -0.24
AP003550.1-201ENST00000522416 ALDH1B1P30837 517 aa13.55□□□□□ -0.24
AP003550.1-201ENST00000522416 C1QTNF8P60827 252 aa13.55□□□□□ -0.24
AP003550.1-201ENST00000522416 CCDC93Q567U6 631 aa13.55□□□□□ -0.24
AP003550.1-201ENST00000522416 SLC10A5Q5PT55 438 aa13.55□□□□□ -0.24
AP003550.1-201ENST00000522416 CEP350Q5VT06 3117 aa13.55□□□□□ -0.24
AP003550.1-201ENST00000522416 PI4KAP2A4QPH2 592 aa13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 KIF3CO14782 793 aa13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 HOXA10P31260 410 aaPredicted RBP13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 DIEXFQ68CQ4 756 aaKnown RBP13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 MIER1Q8N108 512 aa13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 PI4KAP1Q8N8J0 262 aa13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 RRAGCQ9HB90 399 aa13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 ABCC4O15439 1325 aa13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 MYH3P11055 1940 aa13.54□□□□□ -0.24
AP003550.1-201ENST00000522416 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
AP003550.1-201ENST00000522416 METTL22Q9BUU2 404 aaPredicted RBP13.53□□□□□ -0.24
AP003550.1-201ENST00000522416 MYH16Q9H6N6 1097 aa13.53□□□□□ -0.24
AP003550.1-201ENST00000522416 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
AP003550.1-201ENST00000522416 CCER2I3L3R5 266 aa13.52□□□□□ -0.25
AP003550.1-201ENST00000522416 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
AP003550.1-201ENST00000522416 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.25
AP003550.1-201ENST00000522416 CWF19L2Q2TBE0 894 aaKnown RBP13.52□□□□□ -0.25
AP003550.1-201ENST00000522416 SOGA3Q5TF21 947 aa13.52□□□□□ -0.25
AP003550.1-201ENST00000522416 KSR2Q6VAB6 950 aa13.52□□□□□ -0.25
AP003550.1-201ENST00000522416 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
AP003550.1-201ENST00000522416 CCDC85AQ96PX6 553 aaPredicted RBP13.52□□□□□ -0.25
AP003550.1-201ENST00000522416 CRAMP1Q96RY5 1269 aa13.52□□□□□ -0.25
AP003550.1-201ENST00000522416 COL4A5P29400 1685 aa13.51□□□□□ -0.25
AP003550.1-201ENST00000522416 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
AP003550.1-201ENST00000522416 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
AP003550.1-201ENST00000522416 LTBP3Q9NS15 1303 aa13.51□□□□□ -0.25
AP003550.1-201ENST00000522416 IGKV5-2P06315 115 aa13.51□□□□□ -0.25
AP003550.1-201ENST00000522416 FLIIQ13045 1269 aa13.51□□□□□ -0.25
AP003550.1-201ENST00000522416 FKBP5Q13451 457 aaPredicted RBP13.51□□□□□ -0.25
AP003550.1-201ENST00000522416 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
AP003550.1-201ENST00000522416 CWC25Q9NXE8 425 aaPredicted RBP13.51□□□□□ -0.25
AP003550.1-201ENST00000522416 SNED1Q8TER0 1413 aa13.5□□□□□ -0.25
AP003550.1-201ENST00000522416 F6X3S4 739 aa13.5□□□□□ -0.25
AP003550.1-201ENST00000522416 TRIM28Q13263 835 aaKnown RBP13.5□□□□□ -0.25
AP003550.1-201ENST00000522416 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
AP003550.1-201ENST00000522416 ZBTB38Q8NAP3 1195 aaPredicted RBP13.5□□□□□ -0.25
AP003550.1-201ENST00000522416 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
AP003550.1-201ENST00000522416 ZNF541Q9H0D2 1346 aa13.49□□□□□ -0.25
AP003550.1-201ENST00000522416 GLTPD2A6NH11 291 aa13.49□□□□□ -0.25
AP003550.1-201ENST00000522416 DDNO94850 711 aaPredicted RBP13.49□□□□□ -0.25
AP003550.1-201ENST00000522416 IARSP41252 1262 aaKnown RBP13.49□□□□□ -0.25
AP003550.1-201ENST00000522416 CCDC191Q8NCU4 936 aa13.49□□□□□ -0.25
AP003550.1-201ENST00000522416 CELF1Q92879 486 aaKnown RBP13.49□□□□□ -0.25
AP003550.1-201ENST00000522416 LRRC37AA6NMS7 1700 aa13.48□□□□□ -0.25
AP003550.1-201ENST00000522416 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms