RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 SETDB2Q96T68 719 aa15.44■□□□□ 0.06
SPIDR-219ENST00000522321 ISCA1Q9BUE6 129 aa15.44■□□□□ 0.06
SPIDR-219ENST00000522321 PDGFDQ9GZP0 370 aaPredicted RBP15.44■□□□□ 0.06
SPIDR-219ENST00000522321 BCORQ6W2J9 1755 aa15.44■□□□□ 0.06
SPIDR-219ENST00000522321 FAM177BA6PVY3 158 aa15.43■□□□□ 0.06
SPIDR-219ENST00000522321 ZBTB7BO15156 539 aaPredicted RBP15.43■□□□□ 0.06
SPIDR-219ENST00000522321 GNAI2P04899 355 aa15.43■□□□□ 0.06
SPIDR-219ENST00000522321 NLRP10Q86W26 655 aa15.43■□□□□ 0.06
SPIDR-219ENST00000522321 COL23A1Q86Y22 540 aaPredicted RBP15.43■□□□□ 0.06
SPIDR-219ENST00000522321 C4AP0C0L4 1744 aa15.43■□□□□ 0.06
SPIDR-219ENST00000522321 UBR3Q6ZT12 1888 aa15.42■□□□□ 0.06
SPIDR-219ENST00000522321 N4BP2Q86UW6 1770 aaPredicted RBP15.42■□□□□ 0.06
SPIDR-219ENST00000522321 CARMIL3Q8ND23 1372 aa15.42■□□□□ 0.06
SPIDR-219ENST00000522321 IBTKQ9P2D0 1353 aaPredicted RBP15.42■□□□□ 0.06
SPIDR-219ENST00000522321 GTF2E1P29083 439 aaPredicted RBP15.42■□□□□ 0.06
SPIDR-219ENST00000522321 TRIM28Q13263 835 aaKnown RBP15.42■□□□□ 0.06
SPIDR-219ENST00000522321 TBC1D9BQ66K14 1250 aa15.42■□□□□ 0.06
SPIDR-219ENST00000522321 UBE3BQ7Z3V4 1068 aa15.42■□□□□ 0.06
SPIDR-219ENST00000522321 ZNF34Q8IZ26 560 aa15.42■□□□□ 0.06
SPIDR-219ENST00000522321 UTP14AQ9BVJ6 771 aaKnown RBP15.42■□□□□ 0.06
SPIDR-219ENST00000522321 C1orf115Q9H7X2 142 aa15.42■□□□□ 0.06
SPIDR-219ENST00000522321 TRMT112Q9UI30 125 aaKnown RBP15.42■□□□□ 0.06
SPIDR-219ENST00000522321 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
SPIDR-219ENST00000522321 GYS1P13807 737 aa15.41■□□□□ 0.06
SPIDR-219ENST00000522321 HSP90B1P14625 803 aaKnown RBP15.41■□□□□ 0.06
SPIDR-219ENST00000522321 NBPF5PQ86XG9 351 aaPredicted RBP15.41■□□□□ 0.06
SPIDR-219ENST00000522321 NYXQ9GZU5 481 aa15.41■□□□□ 0.06
SPIDR-219ENST00000522321 BCL2L12Q9HB09 334 aa15.41■□□□□ 0.06
SPIDR-219ENST00000522321 ZBTB40Q9NUA8 1239 aa15.41■□□□□ 0.06
SPIDR-219ENST00000522321 NBPF7P0C2Y1 421 aaPredicted RBP15.4■□□□□ 0.06
SPIDR-219ENST00000522321 RTL5Q5HYW3 569 aaPredicted RBP15.4■□□□□ 0.06
SPIDR-219ENST00000522321 NLGN1Q8N2Q7 840 aa15.4■□□□□ 0.06
SPIDR-219ENST00000522321 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
SPIDR-219ENST00000522321 CCDC136Q96JN2 1154 aa15.4■□□□□ 0.06
SPIDR-219ENST00000522321 USP44Q9H0E7 712 aa15.4■□□□□ 0.06
SPIDR-219ENST00000522321 PPP4R2Q9NY27 417 aa15.4■□□□□ 0.06
SPIDR-219ENST00000522321 LRRFIP2Q9Y608 721 aaKnown RBP15.4■□□□□ 0.06
SPIDR-219ENST00000522321 SH3TC1Q8TE82 1336 aa15.4■□□□□ 0.06
SPIDR-219ENST00000522321 PCCAP05165 728 aaPredicted RBP15.39■□□□□ 0.05
SPIDR-219ENST00000522321 MSL1Q68DK7 614 aa15.39■□□□□ 0.05
SPIDR-219ENST00000522321 FHDC1Q9C0D6 1143 aaPredicted RBP15.39■□□□□ 0.05
SPIDR-219ENST00000522321 HMMRO75330 724 aa15.38■□□□□ 0.05
SPIDR-219ENST00000522321 PTGER2P43116 358 aa15.38■□□□□ 0.05
SPIDR-219ENST00000522321 NFIXQ14938 502 aa15.38■□□□□ 0.05
SPIDR-219ENST00000522321 SUSD4Q5VX71 490 aa15.38■□□□□ 0.05
SPIDR-219ENST00000522321 JARID2Q92833 1246 aaPredicted RBP15.38■□□□□ 0.05
SPIDR-219ENST00000522321 FAM89AQ96GI7 184 aa15.38■□□□□ 0.05
SPIDR-219ENST00000522321 MTFR1LQ9H019 292 aa15.38■□□□□ 0.05
SPIDR-219ENST00000522321 CHMP3Q9Y3E7 222 aa15.38■□□□□ 0.05
SPIDR-219ENST00000522321 ANKRD36CQ5JPF3 1778 aa15.38■□□□□ 0.05
SPIDR-219ENST00000522321 UTYO14607 1347 aa15.38■□□□□ 0.05
SPIDR-219ENST00000522321 IRS4O14654 1257 aaPredicted RBP15.37■□□□□ 0.05
SPIDR-219ENST00000522321 NTSR2O95665 410 aa15.37■□□□□ 0.05
SPIDR-219ENST00000522321 ST5P78524 1137 aa15.37■□□□□ 0.05
SPIDR-219ENST00000522321 TPTE2Q6XPS3 522 aa15.37■□□□□ 0.05
SPIDR-219ENST00000522321 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
SPIDR-219ENST00000522321 CNBD1Q8NA66 436 aa15.37■□□□□ 0.05
SPIDR-219ENST00000522321 SUCLG2Q96I99 432 aa15.37■□□□□ 0.05
SPIDR-219ENST00000522321 SYT17Q9BSW7 474 aa15.37■□□□□ 0.05
SPIDR-219ENST00000522321 PARP3Q9Y6F1 533 aa15.37■□□□□ 0.05
SPIDR-219ENST00000522321 AFDNP55196 1824 aaKnown RBP15.37■□□□□ 0.05
SPIDR-219ENST00000522321 CDHR2Q9BYE9 1310 aa15.37■□□□□ 0.05
SPIDR-219ENST00000522321 TUBGCP6Q96RT7 1819 aa15.36■□□□□ 0.05
SPIDR-219ENST00000522321 H7C1W4 665 aa15.36■□□□□ 0.05
SPIDR-219ENST00000522321 SLC16A10Q8TF71 515 aa15.36■□□□□ 0.05
SPIDR-219ENST00000522321 QSER1Q2KHR3 1735 aa15.35■□□□□ 0.05
SPIDR-219ENST00000522321 MMP10P09238 476 aa15.35■□□□□ 0.05
SPIDR-219ENST00000522321 NUTM1Q86Y26 1132 aa15.35■□□□□ 0.05
SPIDR-219ENST00000522321 RPAP2Q8IXW5 612 aaPredicted RBP15.35■□□□□ 0.05
SPIDR-219ENST00000522321 ZNF784Q8NCA9 323 aaPredicted RBP15.35■□□□□ 0.05
SPIDR-219ENST00000522321 BICC1Q9H694 974 aaKnown RBP15.35■□□□□ 0.05
SPIDR-219ENST00000522321 SERPINB2P05120 415 aa15.34■□□□□ 0.05
SPIDR-219ENST00000522321 CEP85Q6P2H3 762 aa15.34■□□□□ 0.05
SPIDR-219ENST00000522321 RWDD1Q9H446 243 aaPredicted RBP15.34■□□□□ 0.05
SPIDR-219ENST00000522321 NUP98P52948 1817 aa15.33■□□□□ 0.05
SPIDR-219ENST00000522321 SRGAP3O43295 1099 aa15.33■□□□□ 0.04
SPIDR-219ENST00000522321 PDE8AO60658 829 aa15.33■□□□□ 0.04
SPIDR-219ENST00000522321 CASP7P55210 303 aa15.33■□□□□ 0.04
SPIDR-219ENST00000522321 GPR162Q16538 588 aa15.33■□□□□ 0.04
SPIDR-219ENST00000522321 ERFEQ4G0M1 354 aa15.33■□□□□ 0.04
SPIDR-219ENST00000522321 B4GALNT3Q6L9W6 998 aa15.33■□□□□ 0.04
SPIDR-219ENST00000522321 PELP1Q8IZL8 1130 aaKnown RBP15.33■□□□□ 0.04
SPIDR-219ENST00000522321 ANKRD44Q8N8A2 993 aa15.33■□□□□ 0.04
SPIDR-219ENST00000522321 PCDHB15Q9Y5E8 787 aa15.33■□□□□ 0.04
SPIDR-219ENST00000522321 CASZ1Q86V15 1759 aa15.33■□□□□ 0.04
SPIDR-219ENST00000522321 COL24A1Q17RW2 1714 aa15.32■□□□□ 0.04
SPIDR-219ENST00000522321 POLRMTO00411 1230 aaKnown RBP15.32■□□□□ 0.04
SPIDR-219ENST00000522321 HCLS1P14317 486 aaPredicted RBP15.32■□□□□ 0.04
SPIDR-219ENST00000522321 POLD1P28340 1107 aa15.32■□□□□ 0.04
SPIDR-219ENST00000522321 TM4SF1P30408 202 aa15.32■□□□□ 0.04
SPIDR-219ENST00000522321 CTSWP56202 376 aa15.32■□□□□ 0.04
SPIDR-219ENST00000522321 DDR1Q08345 913 aa15.32■□□□□ 0.04
SPIDR-219ENST00000522321 TAF7LQ5H9L4 462 aa15.32■□□□□ 0.04
SPIDR-219ENST00000522321 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
SPIDR-219ENST00000522321 PRR5LQ6MZQ0 368 aa15.31■□□□□ 0.04
SPIDR-219ENST00000522321 LMBR1LQ6UX01 489 aa15.31■□□□□ 0.04
SPIDR-219ENST00000522321 PLA2G12BQ9BX93 195 aa15.31■□□□□ 0.04
SPIDR-219ENST00000522321 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-219ENST00000522321 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
SPIDR-219ENST00000522321 ATP8B2P98198 1209 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms