RNA–Protein interactions for RNA: ENST00000521990.1

TSPAN18-210, Transcript of tetraspanin 18, humanhuman

TSL 2

Gene TSPAN18, Length 700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-210ENST00000521990 UBN2Q6ZU65 1347 aa18.5■□□□□ 0.55
TSPAN18-210ENST00000521990 LTBP3Q9NS15 1303 aa18.5■□□□□ 0.55
TSPAN18-210ENST00000521990 KRT24Q2M2I5 525 aa18.5■□□□□ 0.55
TSPAN18-210ENST00000521990 SOGA3Q5TF21 947 aa18.5■□□□□ 0.55
TSPAN18-210ENST00000521990 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
TSPAN18-210ENST00000521990 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
TSPAN18-210ENST00000521990 NYXQ9GZU5 481 aa18.5■□□□□ 0.55
TSPAN18-210ENST00000521990 VEGFAP15692 232 aaPredicted RBP18.49■□□□□ 0.55
TSPAN18-210ENST00000521990 HTRA3P83110 453 aa18.49■□□□□ 0.55
TSPAN18-210ENST00000521990 CCDC93Q567U6 631 aa18.49■□□□□ 0.55
TSPAN18-210ENST00000521990 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
TSPAN18-210ENST00000521990 CDCA7LQ96GN5 454 aa18.49■□□□□ 0.55
TSPAN18-210ENST00000521990 FSTL1Q12841 308 aa18.48■□□□□ 0.55
TSPAN18-210ENST00000521990 DPY19L2Q6NUT2 758 aa18.48■□□□□ 0.55
TSPAN18-210ENST00000521990 GIGYF2Q6Y7W6 1299 aaKnown RBP18.48■□□□□ 0.55
TSPAN18-210ENST00000521990 ZNF34Q8IZ26 560 aa18.48■□□□□ 0.55
TSPAN18-210ENST00000521990 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
TSPAN18-210ENST00000521990 MBIPQ9NS73 344 aa18.48■□□□□ 0.55
TSPAN18-210ENST00000521990 POTECB2RU33 542 aa18.47■□□□□ 0.55
TSPAN18-210ENST00000521990 AIMP1Q12904 312 aaKnown RBP18.47■□□□□ 0.55
TSPAN18-210ENST00000521990 ALDH1B1P30837 517 aa18.46■□□□□ 0.55
TSPAN18-210ENST00000521990 SMC1BQ8NDV3 1235 aa18.46■□□□□ 0.55
TSPAN18-210ENST00000521990 ZNF277Q9NRM2 450 aaPredicted RBP18.46■□□□□ 0.55
TSPAN18-210ENST00000521990 WDR90Q96KV7 1748 aa18.46■□□□□ 0.55
TSPAN18-210ENST00000521990 DDNO94850 711 aaPredicted RBP18.45■□□□□ 0.54
TSPAN18-210ENST00000521990 NTSR2O95665 410 aa18.45■□□□□ 0.54
TSPAN18-210ENST00000521990 FKBP4Q02790 459 aaKnown RBP eCLIP18.45■□□□□ 0.54
TSPAN18-210ENST00000521990 CRY2Q49AN0 593 aa18.45■□□□□ 0.54
TSPAN18-210ENST00000521990 DUSP27Q5VZP5 1158 aa18.45■□□□□ 0.54
TSPAN18-210ENST00000521990 COPS6Q7L5N1 327 aa18.45■□□□□ 0.54
TSPAN18-210ENST00000521990 XAGE3Q8WTP9 111 aa18.45■□□□□ 0.54
TSPAN18-210ENST00000521990 FANCIQ9NVI1 1328 aa18.45■□□□□ 0.54
TSPAN18-210ENST00000521990 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
TSPAN18-210ENST00000521990 C3orf67Q6ZVT6 689 aa18.44■□□□□ 0.54
TSPAN18-210ENST00000521990 DNAJC5GQ8N7S2 189 aa18.44■□□□□ 0.54
TSPAN18-210ENST00000521990 RPGRQ92834 1020 aaKnown RBP18.44■□□□□ 0.54
TSPAN18-210ENST00000521990 PARP10Q53GL7 1025 aa18.43■□□□□ 0.54
TSPAN18-210ENST00000521990 PPP1R42Q7Z4L9 355 aa18.43■□□□□ 0.54
TSPAN18-210ENST00000521990 SLC51AQ86UW1 340 aa18.43■□□□□ 0.54
TSPAN18-210ENST00000521990 RTKN2Q8IZC4 609 aa18.43■□□□□ 0.54
TSPAN18-210ENST00000521990 TSR2Q969E8 191 aaKnown RBP18.43■□□□□ 0.54
TSPAN18-210ENST00000521990 TCERG1O14776 1098 aaKnown RBP18.42■□□□□ 0.54
TSPAN18-210ENST00000521990 SYNE4Q8N205 404 aa18.42■□□□□ 0.54
TSPAN18-210ENST00000521990 ZNF428Q96B54 188 aa18.42■□□□□ 0.54
TSPAN18-210ENST00000521990 UTP14AQ9BVJ6 771 aaKnown RBP18.42■□□□□ 0.54
TSPAN18-210ENST00000521990 DDX21Q9NR30 783 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSPAN18-210ENST00000521990 CHPF2Q9P2E5 772 aa18.42■□□□□ 0.54
TSPAN18-210ENST00000521990 ANKRD36CQ5JPF3 1778 aa18.41■□□□□ 0.54
TSPAN18-210ENST00000521990 HOXA10P31260 410 aaPredicted RBP18.41■□□□□ 0.54
TSPAN18-210ENST00000521990 HDGFL1Q5TGJ6 251 aa18.41■□□□□ 0.54
TSPAN18-210ENST00000521990 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
TSPAN18-210ENST00000521990 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
TSPAN18-210ENST00000521990 CT47B1P0C2W7 299 aaPredicted RBP18.4■□□□□ 0.54
TSPAN18-210ENST00000521990 IARSP41252 1262 aaKnown RBP18.4■□□□□ 0.54
TSPAN18-210ENST00000521990 RBM17Q96I25 401 aaKnown RBP18.4■□□□□ 0.54
TSPAN18-210ENST00000521990 ZNF541Q9H0D2 1346 aa18.4■□□□□ 0.54
TSPAN18-210ENST00000521990 HOXB7P09629 217 aa18.39■□□□□ 0.53
TSPAN18-210ENST00000521990 EXOSC9Q06265 439 aaKnown RBP18.39■□□□□ 0.53
TSPAN18-210ENST00000521990 NLRP10Q86W26 655 aa18.39■□□□□ 0.53
TSPAN18-210ENST00000521990 NLRP3Q96P20 1036 aa18.39■□□□□ 0.53
TSPAN18-210ENST00000521990 SNED1Q8TER0 1413 aa18.39■□□□□ 0.53
TSPAN18-210ENST00000521990 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
TSPAN18-210ENST00000521990 POTEJP0CG39 1038 aa18.38■□□□□ 0.53
TSPAN18-210ENST00000521990 TCIRG1Q13488 830 aa18.38■□□□□ 0.53
TSPAN18-210ENST00000521990 HSP90AB3PQ58FF7 597 aa18.38■□□□□ 0.53
TSPAN18-210ENST00000521990 CRAMP1Q96RY5 1269 aa18.38■□□□□ 0.53
TSPAN18-210ENST00000521990 PPEF1O14829 653 aaPredicted RBP18.37■□□□□ 0.53
TSPAN18-210ENST00000521990 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
TSPAN18-210ENST00000521990 SLC10A5Q5PT55 438 aa18.37■□□□□ 0.53
TSPAN18-210ENST00000521990 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
TSPAN18-210ENST00000521990 PSMD1Q99460 953 aa18.37■□□□□ 0.53
TSPAN18-210ENST00000521990 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
TSPAN18-210ENST00000521990 LAMB2P55268 1798 aa18.36■□□□□ 0.53
TSPAN18-210ENST00000521990 CC2D2BQ6DHV5 1058 aa18.36■□□□□ 0.53
TSPAN18-210ENST00000521990 KLRG1Q96E93 195 aa18.36■□□□□ 0.53
TSPAN18-210ENST00000521990 TRMT112Q9UI30 125 aaKnown RBP18.36■□□□□ 0.53
TSPAN18-210ENST00000521990 ELL2O00472 640 aaPredicted RBP18.35■□□□□ 0.53
TSPAN18-210ENST00000521990 TWISTNBQ3B726 338 aaPredicted RBP18.35■□□□□ 0.53
TSPAN18-210ENST00000521990 CHADLQ6NUI6 762 aa18.35■□□□□ 0.53
TSPAN18-210ENST00000521990 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
TSPAN18-210ENST00000521990 L3MBTL3Q96JM7 780 aaPredicted RBP18.35■□□□□ 0.53
TSPAN18-210ENST00000521990 DBF4Q9UBU7 674 aaPredicted RBP18.35■□□□□ 0.53
TSPAN18-210ENST00000521990 COL4A5P29400 1685 aa18.34■□□□□ 0.53
TSPAN18-210ENST00000521990 ABCC4O15439 1325 aa18.34■□□□□ 0.53
TSPAN18-210ENST00000521990 IQCA1LA6NCM1 817 aa18.34■□□□□ 0.53
TSPAN18-210ENST00000521990 FZD9O00144 591 aa18.34■□□□□ 0.53
TSPAN18-210ENST00000521990 ANKRD13DQ6ZTN6 518 aa18.34■□□□□ 0.53
TSPAN18-210ENST00000521990 PLBD2Q8NHP8 589 aa18.34■□□□□ 0.53
TSPAN18-210ENST00000521990 JDP2Q8WYK2 163 aa18.34■□□□□ 0.53
TSPAN18-210ENST00000521990 TAF1DQ9H5J8 278 aaPredicted RBP18.34■□□□□ 0.53
TSPAN18-210ENST00000521990 SCN4AP35499 1836 aa18.34■□□□□ 0.53
TSPAN18-210ENST00000521990 RNF123Q5XPI4 1314 aa18.33■□□□□ 0.53
TSPAN18-210ENST00000521990 SH3TC1Q8TE82 1336 aa18.33■□□□□ 0.53
TSPAN18-210ENST00000521990 ATP5J2-PTCD1G3V325 749 aa18.33■□□□□ 0.52
TSPAN18-210ENST00000521990 VAMP4O75379 141 aa18.33■□□□□ 0.52
TSPAN18-210ENST00000521990 LARGE2Q8N3Y3 721 aa18.33■□□□□ 0.52
TSPAN18-210ENST00000521990 EAPPQ56P03 285 aaPredicted RBP18.32■□□□□ 0.52
TSPAN18-210ENST00000521990 HYPKQ9NX55 129 aa18.32■□□□□ 0.52
TSPAN18-210ENST00000521990 ATP6V0A2Q9Y487 856 aa18.32■□□□□ 0.52
TSPAN18-210ENST00000521990 TAF1P21675 1872 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms