RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
SHPRH-209ENST00000521977 LY75O60449 1722 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 IGKV5-2P06315 115 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 RXRBP28702 533 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 ATP6V1AP38606 617 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 TTLL7Q6ZT98 887 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 RIC3Q7Z5B4 369 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
SHPRH-209ENST00000521977 C1orf115Q9H7X2 142 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 PCDHB8Q9UN66 801 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 ZBTB1Q9Y2K1 713 aa11.97□□□□□ -0.49
SHPRH-209ENST00000521977 UTYO14607 1347 aa11.96□□□□□ -0.49
SHPRH-209ENST00000521977 IL6STP40189 918 aaPredicted RBP11.96□□□□□ -0.49
SHPRH-209ENST00000521977 CEP85Q6P2H3 762 aa11.96□□□□□ -0.49
SHPRH-209ENST00000521977 INTS5Q6P9B9 1019 aaKnown RBP11.96□□□□□ -0.49
SHPRH-209ENST00000521977 RPAP2Q8IXW5 612 aaPredicted RBP11.96□□□□□ -0.49
SHPRH-209ENST00000521977 ANKRD44Q8N8A2 993 aa11.96□□□□□ -0.49
SHPRH-209ENST00000521977 MYH14Q7Z406 1995 aaKnown RBP11.96□□□□□ -0.5
SHPRH-209ENST00000521977 NEURL1BA8MQ27 555 aa11.95□□□□□ -0.5
SHPRH-209ENST00000521977 GNAI2P04899 355 aa11.95□□□□□ -0.5
SHPRH-209ENST00000521977 CRKLP46109 303 aaKnown RBP11.95□□□□□ -0.5
SHPRH-209ENST00000521977 EIF5P55010 431 aaKnown RBP11.95□□□□□ -0.5
SHPRH-209ENST00000521977 POTEAQ6S8J7 498 aa11.95□□□□□ -0.5
SHPRH-209ENST00000521977 CCDC87Q9NVE4 849 aa11.95□□□□□ -0.5
SHPRH-209ENST00000521977 CNTNAP4Q9C0A0 1308 aa11.94□□□□□ -0.5
SHPRH-209ENST00000521977 UBTFL1P0CB47 393 aaPredicted RBP11.94□□□□□ -0.5
SHPRH-209ENST00000521977 NEXNQ0ZGT2 675 aa11.94□□□□□ -0.5
SHPRH-209ENST00000521977 CWF19L2Q2TBE0 894 aaKnown RBP11.94□□□□□ -0.5
SHPRH-209ENST00000521977 SMC5Q8IY18 1101 aa11.94□□□□□ -0.5
SHPRH-209ENST00000521977 MYD88Q99836 296 aa11.94□□□□□ -0.5
SHPRH-209ENST00000521977 MAP3K15Q6ZN16 1313 aa11.93□□□□□ -0.5
SHPRH-209ENST00000521977 NBPF7P0C2Y1 421 aaPredicted RBP11.93□□□□□ -0.5
SHPRH-209ENST00000521977 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
SHPRH-209ENST00000521977 GCKRQ14397 625 aa11.93□□□□□ -0.5
SHPRH-209ENST00000521977 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
SHPRH-209ENST00000521977 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
SHPRH-209ENST00000521977 TAF1LQ8IZX4 1826 aa11.93□□□□□ -0.5
SHPRH-209ENST00000521977 COL15A1P39059 1388 aa11.92□□□□□ -0.5
SHPRH-209ENST00000521977 ERVV-1B6SEH8 477 aa11.92□□□□□ -0.5
SHPRH-209ENST00000521977 GRM8O00222 908 aa11.92□□□□□ -0.5
SHPRH-209ENST00000521977 PLCG2P16885 1265 aa11.92□□□□□ -0.5
SHPRH-209ENST00000521977 ATP8B2P98198 1209 aa11.92□□□□□ -0.5
SHPRH-209ENST00000521977 TRIM28Q13263 835 aaKnown RBP11.92□□□□□ -0.5
SHPRH-209ENST00000521977 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
SHPRH-209ENST00000521977 KIF6Q6ZMV9 814 aa11.92□□□□□ -0.5
SHPRH-209ENST00000521977 GCC1Q96CN9 775 aa11.92□□□□□ -0.5
SHPRH-209ENST00000521977 ISCA1Q9BUE6 129 aa11.92□□□□□ -0.5
SHPRH-209ENST00000521977 ZBTB3Q9H5J0 574 aa11.92□□□□□ -0.5
SHPRH-209ENST00000521977 LRRFIP2Q9Y608 721 aaKnown RBP11.92□□□□□ -0.5
SHPRH-209ENST00000521977 AFDNP55196 1824 aaKnown RBP11.92□□□□□ -0.5
SHPRH-209ENST00000521977 CASP7P55210 303 aa11.91□□□□□ -0.5
SHPRH-209ENST00000521977 TCIRG1Q13488 830 aa11.91□□□□□ -0.5
SHPRH-209ENST00000521977 CCDC191Q8NCU4 936 aa11.91□□□□□ -0.5
SHPRH-209ENST00000521977 OCEL1Q9H607 264 aa11.91□□□□□ -0.5
SHPRH-209ENST00000521977 DCTPP1Q9H773 170 aa11.91□□□□□ -0.5
SHPRH-209ENST00000521977 C9orf78Q9NZ63 289 aaPredicted RBP11.91□□□□□ -0.5
SHPRH-209ENST00000521977 HDAC5Q9UQL6 1122 aa11.91□□□□□ -0.5
SHPRH-209ENST00000521977 TRIM37O94972 964 aa11.9□□□□□ -0.5
SHPRH-209ENST00000521977 MTX1Q13505 466 aa11.9□□□□□ -0.5
SHPRH-209ENST00000521977 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
SHPRH-209ENST00000521977 KAZALD1Q96I82 304 aa11.9□□□□□ -0.5
SHPRH-209ENST00000521977 CCNL1Q9UK58 526 aaPredicted RBP11.9□□□□□ -0.5
SHPRH-209ENST00000521977 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
SHPRH-209ENST00000521977 EP400Q96L91 3159 aa11.9□□□□□ -0.5
SHPRH-209ENST00000521977 NUP98P52948 1817 aa11.9□□□□□ -0.5
SHPRH-209ENST00000521977 ANKRD36CQ5JPF3 1778 aa11.9□□□□□ -0.51
SHPRH-209ENST00000521977 PNMA6EA0A0J9YXQ4 647 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 ATP5J2-PTCD1G3V325 749 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 H7C1W4 665 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 RGL2O15211 777 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 HMMRO75330 724 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 NUCB1Q02818 461 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 HLFQ16534 295 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 HSP90AB3PQ58FF7 597 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 SLC27A3Q5K4L6 730 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 SSH3Q8TE77 659 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 SUCLG2Q96I99 432 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 CWC25Q9NXE8 425 aaPredicted RBP11.89□□□□□ -0.51
SHPRH-209ENST00000521977 ZNF330Q9Y3S2 320 aaPredicted RBP11.89□□□□□ -0.51
SHPRH-209ENST00000521977 BCORQ6W2J9 1755 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 C4BP0C0L5 1744 aa11.89□□□□□ -0.51
SHPRH-209ENST00000521977 PLSCR1O15162 318 aa11.88□□□□□ -0.51
SHPRH-209ENST00000521977 RPS6KA4O75676 772 aa11.88□□□□□ -0.51
SHPRH-209ENST00000521977 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
SHPRH-209ENST00000521977 KCNQ4P56696 695 aa11.88□□□□□ -0.51
SHPRH-209ENST00000521977 SKAP1Q86WV1 359 aa11.88□□□□□ -0.51
SHPRH-209ENST00000521977 LRRC4BQ9NT99 713 aa11.88□□□□□ -0.51
SHPRH-209ENST00000521977 TNS1Q9HBL0 1735 aaKnown RBP11.87□□□□□ -0.51
SHPRH-209ENST00000521977 A0A087WZG4 1122 aa11.87□□□□□ -0.51
SHPRH-209ENST00000521977 PPP1R42Q7Z4L9 355 aa11.87□□□□□ -0.51
SHPRH-209ENST00000521977 NPM2Q86SE8 214 aaKnown RBP11.87□□□□□ -0.51
SHPRH-209ENST00000521977 ZNF34Q8IZ26 560 aa11.87□□□□□ -0.51
SHPRH-209ENST00000521977 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
SHPRH-209ENST00000521977 TBC1D2BQ9UPU7 963 aa11.87□□□□□ -0.51
SHPRH-209ENST00000521977 RABL6Q3YEC7 729 aaPredicted RBP11.86□□□□□ -0.51
SHPRH-209ENST00000521977 NLRP10Q86W26 655 aa11.86□□□□□ -0.51
SHPRH-209ENST00000521977 BICC1Q9H694 974 aaKnown RBP11.86□□□□□ -0.51
SHPRH-209ENST00000521977 SCN7AQ01118 1682 aa11.86□□□□□ -0.51
SHPRH-209ENST00000521977 RGPD3A6NKT7 1758 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms