RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 BEGAINQ9BUH8 593 aa12.42□□□□□ -0.42
TRAPPC9-212ENST00000521944 MFRPQ9BY79 579 aa12.42□□□□□ -0.42
TRAPPC9-212ENST00000521944 RNF123Q5XPI4 1314 aa12.41□□□□□ -0.42
TRAPPC9-212ENST00000521944 GRM1Q13255 1194 aa12.41□□□□□ -0.42
TRAPPC9-212ENST00000521944 DGKZQ13574 1117 aa12.41□□□□□ -0.42
TRAPPC9-212ENST00000521944 TBC1D9BQ66K14 1250 aa12.41□□□□□ -0.42
TRAPPC9-212ENST00000521944 PRR5LQ6MZQ0 368 aa12.41□□□□□ -0.42
TRAPPC9-212ENST00000521944 PRPF40BQ6NWY9 871 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-212ENST00000521944 SCUBE2Q9NQ36 999 aa12.41□□□□□ -0.42
TRAPPC9-212ENST00000521944 COL15A1P39059 1388 aa12.41□□□□□ -0.42
TRAPPC9-212ENST00000521944 MAP2K2P36507 400 aa12.4□□□□□ -0.42
TRAPPC9-212ENST00000521944 MTHFSP49914 203 aa12.4□□□□□ -0.42
TRAPPC9-212ENST00000521944 SOX10P56693 466 aa12.4□□□□□ -0.42
TRAPPC9-212ENST00000521944 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-212ENST00000521944 OLFM4Q6UX06 510 aa12.4□□□□□ -0.42
TRAPPC9-212ENST00000521944 PNMA8AQ86V59 439 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-212ENST00000521944 KIF20BQ96Q89 1820 aa12.39□□□□□ -0.43
TRAPPC9-212ENST00000521944 TRAF5O00463 557 aa12.39□□□□□ -0.43
TRAPPC9-212ENST00000521944 SRGNP10124 158 aa12.39□□□□□ -0.43
TRAPPC9-212ENST00000521944 PDE6BP35913 854 aa12.39□□□□□ -0.43
TRAPPC9-212ENST00000521944 ECE1P42892 770 aa12.39□□□□□ -0.43
TRAPPC9-212ENST00000521944 FBXO22Q8NEZ5 403 aa12.39□□□□□ -0.43
TRAPPC9-212ENST00000521944 ZNF277Q9NRM2 450 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-212ENST00000521944 TLL2Q9Y6L7 1015 aa12.39□□□□□ -0.43
TRAPPC9-212ENST00000521944 CACNA1SQ13698 1873 aa12.39□□□□□ -0.43
TRAPPC9-212ENST00000521944 MKI67P46013 3256 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-212ENST00000521944 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
TRAPPC9-212ENST00000521944 FZD9O00144 591 aa12.38□□□□□ -0.43
TRAPPC9-212ENST00000521944 PLEKHO1Q53GL0 409 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-212ENST00000521944 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-212ENST00000521944 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-212ENST00000521944 ZIC5Q96T25 663 aa12.38□□□□□ -0.43
TRAPPC9-212ENST00000521944 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
TRAPPC9-212ENST00000521944 EIF5P55010 431 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-212ENST00000521944 SLC39A6Q13433 755 aa12.37□□□□□ -0.43
TRAPPC9-212ENST00000521944 STYK1Q6J9G0 422 aa12.37□□□□□ -0.43
TRAPPC9-212ENST00000521944 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
TRAPPC9-212ENST00000521944 CA12O43570 354 aa12.36□□□□□ -0.43
TRAPPC9-212ENST00000521944 SAPCD2Q86UD0 394 aa12.36□□□□□ -0.43
TRAPPC9-212ENST00000521944 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
TRAPPC9-212ENST00000521944 BOLA1Q9Y3E2 137 aa12.36□□□□□ -0.43
TRAPPC9-212ENST00000521944 CANXP27824 592 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-212ENST00000521944 EPS15P42566 896 aa12.35□□□□□ -0.43
TRAPPC9-212ENST00000521944 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
TRAPPC9-212ENST00000521944 MASTLQ96GX5 879 aa12.35□□□□□ -0.43
TRAPPC9-212ENST00000521944 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
TRAPPC9-212ENST00000521944 LGR6Q9HBX8 967 aa12.35□□□□□ -0.43
TRAPPC9-212ENST00000521944 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC9-212ENST00000521944 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-212ENST00000521944 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRAPPC9-212ENST00000521944 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
TRAPPC9-212ENST00000521944 CIAPIN1Q6FI81 312 aa12.34□□□□□ -0.43
TRAPPC9-212ENST00000521944 C3orf67Q6ZVT6 689 aa12.34□□□□□ -0.43
TRAPPC9-212ENST00000521944 GPC2Q8N158 579 aa12.34□□□□□ -0.43
TRAPPC9-212ENST00000521944 COL4A5P29400 1685 aa12.34□□□□□ -0.43
TRAPPC9-212ENST00000521944 SZT2Q5T011 3432 aa12.34□□□□□ -0.43
TRAPPC9-212ENST00000521944 SCNN1DP51172 638 aa12.33□□□□□ -0.44
TRAPPC9-212ENST00000521944 CCDC93Q567U6 631 aa12.33□□□□□ -0.44
TRAPPC9-212ENST00000521944 SLC52A2Q9HAB3 445 aa12.33□□□□□ -0.44
TRAPPC9-212ENST00000521944 TRPM7Q96QT4 1865 aa12.33□□□□□ -0.44
TRAPPC9-212ENST00000521944 A0A0C4DFX4 3053 aa12.33□□□□□ -0.44
TRAPPC9-212ENST00000521944 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
TRAPPC9-212ENST00000521944 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
TRAPPC9-212ENST00000521944 TBC1D2BQ9UPU7 963 aa12.32□□□□□ -0.44
TRAPPC9-212ENST00000521944 SCN11AQ9UI33 1791 aa12.31□□□□□ -0.44
TRAPPC9-212ENST00000521944 KLRG2A4D1S0 409 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC9-212ENST00000521944 IARSP41252 1262 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-212ENST00000521944 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
TRAPPC9-212ENST00000521944 SYNE4Q8N205 404 aa12.31□□□□□ -0.44
TRAPPC9-212ENST00000521944 HHIPL1Q96JK4 782 aa12.31□□□□□ -0.44
TRAPPC9-212ENST00000521944 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-212ENST00000521944 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC9-212ENST00000521944 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
TRAPPC9-212ENST00000521944 CNBD1Q8NA66 436 aa12.3□□□□□ -0.44
TRAPPC9-212ENST00000521944 CUL9Q8IWT3 2517 aa12.3□□□□□ -0.44
TRAPPC9-212ENST00000521944 SLC24A1O60721 1099 aa12.29□□□□□ -0.44
TRAPPC9-212ENST00000521944 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
TRAPPC9-212ENST00000521944 CELF2O95319 508 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-212ENST00000521944 HABP4Q5JVS0 413 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-212ENST00000521944 GJA3Q9Y6H8 435 aa12.29□□□□□ -0.44
TRAPPC9-212ENST00000521944 SLC51AQ86UW1 340 aa12.28□□□□□ -0.44
TRAPPC9-212ENST00000521944 RTKN2Q8IZC4 609 aa12.28□□□□□ -0.44
TRAPPC9-212ENST00000521944 SETDB2Q96T68 719 aa12.28□□□□□ -0.44
TRAPPC9-212ENST00000521944 TMEM121BQ9BXQ6 578 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-212ENST00000521944 MRC1P22897 1456 aa12.27□□□□□ -0.44
TRAPPC9-212ENST00000521944 SCN7AQ01118 1682 aa12.27□□□□□ -0.45
TRAPPC9-212ENST00000521944 A0A087WZG4 1122 aa12.27□□□□□ -0.45
TRAPPC9-212ENST00000521944 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
TRAPPC9-212ENST00000521944 NPR1P16066 1061 aa12.27□□□□□ -0.45
TRAPPC9-212ENST00000521944 USP50Q70EL3 339 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC9-212ENST00000521944 MICALL2Q8IY33 904 aa12.27□□□□□ -0.45
TRAPPC9-212ENST00000521944 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
TRAPPC9-212ENST00000521944 GLIS2Q9BZE0 524 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC9-212ENST00000521944 ST5P78524 1137 aa12.26□□□□□ -0.45
TRAPPC9-212ENST00000521944 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
TRAPPC9-212ENST00000521944 SULT6B1Q6IMI4 303 aa12.26□□□□□ -0.45
TRAPPC9-212ENST00000521944 DLK2Q6UY11 383 aa12.26□□□□□ -0.45
TRAPPC9-212ENST00000521944 PGAP2Q9UHJ9 254 aa12.26□□□□□ -0.45
TRAPPC9-212ENST00000521944 FAM155AB1AL88 458 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-212ENST00000521944 STARD3NLO95772 234 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms