RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 ZNF521Q96K83 1311 aa10.75□□□□□ -0.69
CTNNA1-231ENST00000521941 IBTKQ9P2D0 1353 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-231ENST00000521941 SRGNP10124 158 aa10.74□□□□□ -0.69
CTNNA1-231ENST00000521941 RTL5Q5HYW3 569 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-231ENST00000521941 G2E3Q7L622 706 aa10.74□□□□□ -0.69
CTNNA1-231ENST00000521941 MASTLQ96GX5 879 aa10.74□□□□□ -0.69
CTNNA1-231ENST00000521941 CHMP4AQ9BY43 222 aa10.74□□□□□ -0.69
CTNNA1-231ENST00000521941 TRMT112Q9UI30 125 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-231ENST00000521941 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
CTNNA1-231ENST00000521941 DDX60Q8IY21 1712 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 CCDC88AQ3V6T2 1871 aa10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 C21orf2O43822 256 aa10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 DDX58O95786 925 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 SLC4A2P04920 1241 aa10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 HCLS1P14317 486 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 STYK1Q6J9G0 422 aa10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 PRPF40BQ6NWY9 871 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 SYNE4Q8N205 404 aa10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 ZNF526Q8TF50 670 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 RPGRQ92834 1020 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 MAP3K2Q9Y2U5 619 aa10.73□□□□□ -0.69
CTNNA1-231ENST00000521941 CACNA1FO60840 1977 aa10.72□□□□□ -0.69
CTNNA1-231ENST00000521941 VAMP4O75379 141 aa10.72□□□□□ -0.69
CTNNA1-231ENST00000521941 NPR1P16066 1061 aa10.72□□□□□ -0.69
CTNNA1-231ENST00000521941 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-231ENST00000521941 C3orf67Q6ZVT6 689 aa10.72□□□□□ -0.69
CTNNA1-231ENST00000521941 CNKSR1Q969H4 720 aa10.72□□□□□ -0.69
CTNNA1-231ENST00000521941 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
CTNNA1-231ENST00000521941 TIAM2Q8IVF5 1701 aa10.72□□□□□ -0.69
CTNNA1-231ENST00000521941 SBF1O95248 1867 aa10.72□□□□□ -0.69
CTNNA1-231ENST00000521941 PI4KAP2A4QPH2 592 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 E9PSI1 815 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 ADCY9O60503 1353 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 HNRNPUQ00839 825 aaKnown RBP eCLIP10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 FLIIQ13045 1269 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 RIC1Q4ADV7 1423 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 PI4KAP1Q8N8J0 262 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 ZNF784Q8NCA9 323 aaPredicted RBP10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 SH3TC1Q8TE82 1336 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 JARID2Q92833 1246 aaPredicted RBP10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 FAM89AQ96GI7 184 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 ISCA1Q9BUE6 129 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 RNF181Q9P0P0 153 aa10.71□□□□□ -0.69
CTNNA1-231ENST00000521941 TAF1P21675 1872 aa10.7□□□□□ -0.7
CTNNA1-231ENST00000521941 FER1L6Q2WGJ9 1857 aa10.7□□□□□ -0.7
CTNNA1-231ENST00000521941 RNF123Q5XPI4 1314 aa10.7□□□□□ -0.7
CTNNA1-231ENST00000521941 SLFN5Q08AF3 891 aa10.7□□□□□ -0.7
CTNNA1-231ENST00000521941 C9orf131Q5VYM1 1079 aa10.7□□□□□ -0.7
CTNNA1-231ENST00000521941 OLFM4Q6UX06 510 aa10.7□□□□□ -0.7
CTNNA1-231ENST00000521941 KSR2Q6VAB6 950 aa10.7□□□□□ -0.7
CTNNA1-231ENST00000521941 NLRP3Q96P20 1036 aa10.7□□□□□ -0.7
CTNNA1-231ENST00000521941 METTL22Q9BUU2 404 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-231ENST00000521941 KLRG2A4D1S0 409 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-231ENST00000521941 NFKBIEO00221 500 aa10.69□□□□□ -0.7
CTNNA1-231ENST00000521941 NEXNQ0ZGT2 675 aa10.69□□□□□ -0.7
CTNNA1-231ENST00000521941 CWF19L2Q2TBE0 894 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-231ENST00000521941 SLC51AQ86UW1 340 aa10.69□□□□□ -0.7
CTNNA1-231ENST00000521941 RBM17Q96I25 401 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-231ENST00000521941 BCL2L13Q9BXK5 485 aa10.69□□□□□ -0.7
CTNNA1-231ENST00000521941 CWC25Q9NXE8 425 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-231ENST00000521941 F6X3S4 739 aa10.68□□□□□ -0.7
CTNNA1-231ENST00000521941 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-231ENST00000521941 PPEF1O14829 653 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-231ENST00000521941 ALDH1B1P30837 517 aa10.68□□□□□ -0.7
CTNNA1-231ENST00000521941 CRY2Q49AN0 593 aa10.68□□□□□ -0.7
CTNNA1-231ENST00000521941 CCDC93Q567U6 631 aa10.68□□□□□ -0.7
CTNNA1-231ENST00000521941 ABCC4O15439 1325 aa10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 MYH3P11055 1940 aa10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 IGKV5-2P06315 115 aa10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 SLC10A5Q5PT55 438 aa10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 DDX46Q7L014 1031 aaKnown RBP10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 CCDC191Q8NCU4 936 aa10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 DNAAF4Q8WXU2 420 aa10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 TAOK3Q9H2K8 898 aa10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 SPEF2Q9C093 1822 aa10.67□□□□□ -0.7
CTNNA1-231ENST00000521941 DICER1Q9UPY3 1922 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 NEURL1BA8MQ27 555 aa10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 PCCAP05165 728 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 LMNB1P20700 586 aa10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 PRELPP51888 382 aa10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 TRIM28Q13263 835 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 SOGA3Q5TF21 947 aa10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 SLC4A10Q6U841 1118 aa10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 ZBTB38Q8NAP3 1195 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 GPBP1L1Q9HC44 474 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 COL4A1P02462 1669 aa10.66□□□□□ -0.7
CTNNA1-231ENST00000521941 UBE3BQ7Z3V4 1068 aa10.65□□□□□ -0.7
CTNNA1-231ENST00000521941 CRAMP1Q96RY5 1269 aa10.65□□□□□ -0.7
CTNNA1-231ENST00000521941 SMC4Q9NTJ3 1288 aa10.65□□□□□ -0.7
CTNNA1-231ENST00000521941 PDE8AO60658 829 aa10.64□□□□□ -0.71
CTNNA1-231ENST00000521941 HOXA10P31260 410 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-231ENST00000521941 FKBP4Q02790 459 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTNNA1-231ENST00000521941 GRAPQ13588 217 aa10.64□□□□□ -0.71
CTNNA1-231ENST00000521941 MRPL50Q8N5N7 158 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-231ENST00000521941 GRAPLQ8TC17 118 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-231ENST00000521941 C7orf43Q8WVR3 580 aa10.64□□□□□ -0.71
CTNNA1-231ENST00000521941 SSH1Q8WYL5 1049 aa10.64□□□□□ -0.71
CTNNA1-231ENST00000521941 TMX4Q9H1E5 349 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-231ENST00000521941 ZNF277Q9NRM2 450 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms