RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
SPARC-204ENST00000521569 LRP10Q7Z4F1 713 aa11.29□□□□□ -0.6
SPARC-204ENST00000521569 RTFDC1Q9BY42 306 aaPredicted RBP11.29□□□□□ -0.6
SPARC-204ENST00000521569 NTSR2O95665 410 aa11.28□□□□□ -0.6
SPARC-204ENST00000521569 NEFMP07197 916 aa11.28□□□□□ -0.6
SPARC-204ENST00000521569 EIF6P56537 245 aaKnown RBP11.28□□□□□ -0.6
SPARC-204ENST00000521569 NFE2L2Q16236 605 aa11.28□□□□□ -0.6
SPARC-204ENST00000521569 DEFB115Q30KQ5 88 aa11.28□□□□□ -0.6
SPARC-204ENST00000521569 KIF6Q6ZMV9 814 aa11.28□□□□□ -0.6
SPARC-204ENST00000521569 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
SPARC-204ENST00000521569 RBM17Q96I25 401 aaKnown RBP11.28□□□□□ -0.6
SPARC-204ENST00000521569 DDX21Q9NR30 783 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPARC-204ENST00000521569 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
SPARC-204ENST00000521569 UBN2Q6ZU65 1347 aa11.28□□□□□ -0.6
SPARC-204ENST00000521569 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
SPARC-204ENST00000521569 SCNN1DP51172 638 aa11.27□□□□□ -0.61
SPARC-204ENST00000521569 EAPPQ56P03 285 aaPredicted RBP11.27□□□□□ -0.61
SPARC-204ENST00000521569 SUSD4Q5VX71 490 aa11.27□□□□□ -0.61
SPARC-204ENST00000521569 TTLL7Q6ZT98 887 aa11.27□□□□□ -0.61
SPARC-204ENST00000521569 PPP1R42Q7Z4L9 355 aa11.27□□□□□ -0.61
SPARC-204ENST00000521569 RPGRQ92834 1020 aaKnown RBP11.27□□□□□ -0.61
SPARC-204ENST00000521569 HHIPL1Q96JK4 782 aa11.27□□□□□ -0.61
SPARC-204ENST00000521569 MIS18AQ9NYP9 233 aa11.27□□□□□ -0.61
SPARC-204ENST00000521569 WDR33Q9C0J8 1336 aaKnown RBP11.27□□□□□ -0.61
SPARC-204ENST00000521569 CCDC88AQ3V6T2 1871 aa11.27□□□□□ -0.61
SPARC-204ENST00000521569 BBOX1O75936 387 aa11.26□□□□□ -0.61
SPARC-204ENST00000521569 PDIA6Q15084 440 aa11.26□□□□□ -0.61
SPARC-204ENST00000521569 MAP1SQ66K74 1059 aaPredicted RBP11.26□□□□□ -0.61
SPARC-204ENST00000521569 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
SPARC-204ENST00000521569 ATP6V0A2Q9Y487 856 aa11.26□□□□□ -0.61
SPARC-204ENST00000521569 CDHR2Q9BYE9 1310 aa11.26□□□□□ -0.61
SPARC-204ENST00000521569 CAPN15O75808 1086 aa11.25□□□□□ -0.61
SPARC-204ENST00000521569 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
SPARC-204ENST00000521569 LARGE2Q8N3Y3 721 aa11.25□□□□□ -0.61
SPARC-204ENST00000521569 SUPT20HQ8NEM7 779 aa11.25□□□□□ -0.61
SPARC-204ENST00000521569 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
SPARC-204ENST00000521569 NLRP3Q96P20 1036 aa11.25□□□□□ -0.61
SPARC-204ENST00000521569 CLEC11AQ9Y240 323 aa11.25□□□□□ -0.61
SPARC-204ENST00000521569 PPEF1O14829 653 aaPredicted RBP11.24□□□□□ -0.61
SPARC-204ENST00000521569 HSPA8P11142 646 aaKnown RBP11.24□□□□□ -0.61
SPARC-204ENST00000521569 MAP2K2P36507 400 aa11.24□□□□□ -0.61
SPARC-204ENST00000521569 EPS15P42566 896 aa11.24□□□□□ -0.61
SPARC-204ENST00000521569 ECE1P42892 770 aa11.24□□□□□ -0.61
SPARC-204ENST00000521569 CST9Q5W186 159 aa11.24□□□□□ -0.61
SPARC-204ENST00000521569 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
SPARC-204ENST00000521569 UTP14AQ9BVJ6 771 aaKnown RBP11.24□□□□□ -0.61
SPARC-204ENST00000521569 ADARB2Q9NS39 739 aaKnown RBP11.24□□□□□ -0.61
SPARC-204ENST00000521569 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
SPARC-204ENST00000521569 RRP7AQ9Y3A4 280 aaKnown RBP11.24□□□□□ -0.61
SPARC-204ENST00000521569 TLL2Q9Y6L7 1015 aa11.24□□□□□ -0.61
SPARC-204ENST00000521569 COL4A5P29400 1685 aa11.24□□□□□ -0.61
SPARC-204ENST00000521569 FAM177BA6PVY3 158 aa11.23□□□□□ -0.61
SPARC-204ENST00000521569 CA12O43570 354 aa11.23□□□□□ -0.61
SPARC-204ENST00000521569 LBX1P52954 281 aa11.23□□□□□ -0.61
SPARC-204ENST00000521569 HSP90AB3PQ58FF7 597 aa11.23□□□□□ -0.61
SPARC-204ENST00000521569 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
SPARC-204ENST00000521569 NIM1KQ8IY84 436 aa11.23□□□□□ -0.61
SPARC-204ENST00000521569 GPRC5DQ9NZD1 345 aa11.23□□□□□ -0.61
SPARC-204ENST00000521569 GPTP24298 496 aa11.22□□□□□ -0.61
SPARC-204ENST00000521569 CXCL9Q07325 125 aa11.22□□□□□ -0.61
SPARC-204ENST00000521569 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
SPARC-204ENST00000521569 CNGB1Q14028 1251 aaPredicted RBP11.22□□□□□ -0.61
SPARC-204ENST00000521569 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
SPARC-204ENST00000521569 TMX4Q9H1E5 349 aaPredicted RBP11.22□□□□□ -0.61
SPARC-204ENST00000521569 ZBTB3Q9H5J0 574 aa11.22□□□□□ -0.61
SPARC-204ENST00000521569 HOXB7P09629 217 aa11.21□□□□□ -0.61
SPARC-204ENST00000521569 MYL6BP14649 208 aa11.21□□□□□ -0.61
SPARC-204ENST00000521569 RGS19P49795 217 aa11.21□□□□□ -0.61
SPARC-204ENST00000521569 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
SPARC-204ENST00000521569 SAPCD2Q86UD0 394 aa11.21□□□□□ -0.61
SPARC-204ENST00000521569 NGEFQ8N5V2 710 aa11.21□□□□□ -0.61
SPARC-204ENST00000521569 CAPNS2Q96L46 248 aa11.21□□□□□ -0.61
SPARC-204ENST00000521569 GPR101Q96P66 508 aaPredicted RBP11.21□□□□□ -0.61
SPARC-204ENST00000521569 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.61
SPARC-204ENST00000521569 ABT1Q9ULW3 272 aaKnown RBP11.21□□□□□ -0.61
SPARC-204ENST00000521569 GJA3Q9Y6H8 435 aa11.21□□□□□ -0.61
SPARC-204ENST00000521569 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.62
SPARC-204ENST00000521569 ABCC4O15439 1325 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 MAPK8IP3Q9UPT6 1336 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 PPIP5K2O43314 1243 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 TCIRG1Q13488 830 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 TNIP1Q15025 636 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 NLRP10Q86W26 655 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 DPF2Q92785 391 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 ABHD8Q96I13 439 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 THUMPD2Q9BTF0 503 aaKnown RBP11.2□□□□□ -0.62
SPARC-204ENST00000521569 KDM3BQ7LBC6 1761 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
SPARC-204ENST00000521569 LTBP1Q14766 1721 aa11.19□□□□□ -0.62
SPARC-204ENST00000521569 CHL1O00533 1208 aa11.19□□□□□ -0.62
SPARC-204ENST00000521569 BRPF1P55201 1214 aaPredicted RBP11.19□□□□□ -0.62
SPARC-204ENST00000521569 TRIM28Q13263 835 aaKnown RBP11.19□□□□□ -0.62
SPARC-204ENST00000521569 GRAPQ13588 217 aa11.19□□□□□ -0.62
SPARC-204ENST00000521569 RALBP1Q15311 655 aa11.19□□□□□ -0.62
SPARC-204ENST00000521569 AOC3Q16853 763 aa11.19□□□□□ -0.62
SPARC-204ENST00000521569 DPP8Q6V1X1 898 aaPredicted RBP11.19□□□□□ -0.62
SPARC-204ENST00000521569 GRAPLQ8TC17 118 aaPredicted RBP11.19□□□□□ -0.62
SPARC-204ENST00000521569 BEGAINQ9BUH8 593 aa11.19□□□□□ -0.62
SPARC-204ENST00000521569 SH3TC1Q8TE82 1336 aa11.18□□□□□ -0.62
SPARC-204ENST00000521569 RIPK4P57078 832 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms