RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ISCA1Q9BUE6 129 aa26.57■■□□□ 1.84
TRIM35-203ENST00000521253 RIC1Q4ADV7 1423 aa26.56■■□□□ 1.84
TRIM35-203ENST00000521253 VAMP4O75379 141 aa26.56■■□□□ 1.84
TRIM35-203ENST00000521253 CRY2Q49AN0 593 aa26.56■■□□□ 1.84
TRIM35-203ENST00000521253 PRPF40BQ6NWY9 871 aaKnown RBP26.56■■□□□ 1.84
TRIM35-203ENST00000521253 TNRC6CQ9HCJ0 1690 aaKnown RBP26.56■■□□□ 1.84
TRIM35-203ENST00000521253 ADCY9O60503 1353 aa26.56■■□□□ 1.84
TRIM35-203ENST00000521253 ATP5J2-PTCD1G3V325 749 aa26.55■■□□□ 1.84
TRIM35-203ENST00000521253 C21orf2O43822 256 aa26.55■■□□□ 1.84
TRIM35-203ENST00000521253 ZNF428Q96B54 188 aa26.55■■□□□ 1.84
TRIM35-203ENST00000521253 ZNF219Q9P2Y4 722 aaPredicted RBP26.55■■□□□ 1.84
TRIM35-203ENST00000521253 RNF123Q5XPI4 1314 aa26.55■■□□□ 1.84
TRIM35-203ENST00000521253 ANKRD36CQ5JPF3 1778 aa26.55■■□□□ 1.84
TRIM35-203ENST00000521253 SLC10A5Q5PT55 438 aa26.54■■□□□ 1.84
TRIM35-203ENST00000521253 TRMT112Q9UI30 125 aaKnown RBP26.54■■□□□ 1.84
TRIM35-203ENST00000521253 DDX58O95786 925 aaKnown RBP26.53■■□□□ 1.84
TRIM35-203ENST00000521253 SLC4A2P04920 1241 aa26.53■■□□□ 1.84
TRIM35-203ENST00000521253 C3orf67Q6ZVT6 689 aa26.53■■□□□ 1.84
TRIM35-203ENST00000521253 SYNE4Q8N205 404 aa26.53■■□□□ 1.84
TRIM35-203ENST00000521253 RASSF7Q02833 373 aa26.52■■□□□ 1.84
TRIM35-203ENST00000521253 G2E3Q7L622 706 aa26.52■■□□□ 1.84
TRIM35-203ENST00000521253 SH3TC1Q8TE82 1336 aa26.51■■□□□ 1.83
TRIM35-203ENST00000521253 TRIM28Q13263 835 aaKnown RBP26.51■■□□□ 1.83
TRIM35-203ENST00000521253 C9orf131Q5VYM1 1079 aa26.51■■□□□ 1.83
TRIM35-203ENST00000521253 MYD88Q99836 296 aa26.51■■□□□ 1.83
TRIM35-203ENST00000521253 ARFGEF2Q9Y6D5 1785 aa26.51■■□□□ 1.83
TRIM35-203ENST00000521253 NFKBIEO00221 500 aa26.5■■□□□ 1.83
TRIM35-203ENST00000521253 HCLS1P14317 486 aaPredicted RBP26.5■■□□□ 1.83
TRIM35-203ENST00000521253 RPGRQ92834 1020 aaKnown RBP26.5■■□□□ 1.83
TRIM35-203ENST00000521253 NLRP3Q96P20 1036 aa26.5■■□□□ 1.83
TRIM35-203ENST00000521253 SLX4Q8IY92 1834 aa26.5■■□□□ 1.83
TRIM35-203ENST00000521253 PI4KAP2A4QPH2 592 aa26.49■■□□□ 1.83
TRIM35-203ENST00000521253 ALDH1B1P30837 517 aa26.49■■□□□ 1.83
TRIM35-203ENST00000521253 HOXA10P31260 410 aaPredicted RBP26.49■■□□□ 1.83
TRIM35-203ENST00000521253 KSR2Q6VAB6 950 aa26.49■■□□□ 1.83
TRIM35-203ENST00000521253 PI4KAP1Q8N8J0 262 aa26.49■■□□□ 1.83
TRIM35-203ENST00000521253 C7orf43Q8WVR3 580 aa26.49■■□□□ 1.83
TRIM35-203ENST00000521253 MAP3K2Q9Y2U5 619 aa26.49■■□□□ 1.83
TRIM35-203ENST00000521253 E9PSI1 815 aa26.48■■□□□ 1.83
TRIM35-203ENST00000521253 METTL22Q9BUU2 404 aaPredicted RBP26.48■■□□□ 1.83
TRIM35-203ENST00000521253 PRELPP51888 382 aa26.47■■□□□ 1.83
TRIM35-203ENST00000521253 FLIIQ13045 1269 aa26.47■■□□□ 1.83
TRIM35-203ENST00000521253 FAM89AQ96GI7 184 aa26.47■■□□□ 1.83
TRIM35-203ENST00000521253 RNF181Q9P0P0 153 aa26.47■■□□□ 1.83
TRIM35-203ENST00000521253 SLFN5Q08AF3 891 aa26.46■■□□□ 1.83
TRIM35-203ENST00000521253 SOGA3Q5TF21 947 aa26.46■■□□□ 1.83
TRIM35-203ENST00000521253 RBM17Q96I25 401 aaKnown RBP26.46■■□□□ 1.83
TRIM35-203ENST00000521253 LMNB1P20700 586 aa26.45■■□□□ 1.82
TRIM35-203ENST00000521253 CDCA7LQ96GN5 454 aa26.45■■□□□ 1.82
TRIM35-203ENST00000521253 RTL5Q5HYW3 569 aaPredicted RBP26.44■■□□□ 1.82
TRIM35-203ENST00000521253 OLFM4Q6UX06 510 aa26.44■■□□□ 1.82
TRIM35-203ENST00000521253 CCDC191Q8NCU4 936 aa26.44■■□□□ 1.82
TRIM35-203ENST00000521253 ZNF526Q8TF50 670 aaPredicted RBP26.44■■□□□ 1.82
TRIM35-203ENST00000521253 CRAMP1Q96RY5 1269 aa26.44■■□□□ 1.82
TRIM35-203ENST00000521253 CACNA1SQ13698 1873 aa26.43■■□□□ 1.82
TRIM35-203ENST00000521253 CCDC93Q567U6 631 aa26.43■■□□□ 1.82
TRIM35-203ENST00000521253 TAOK3Q9H2K8 898 aa26.43■■□□□ 1.82
TRIM35-203ENST00000521253 CWC25Q9NXE8 425 aaPredicted RBP26.43■■□□□ 1.82
TRIM35-203ENST00000521253 FKBP5Q13451 457 aaPredicted RBP26.42■■□□□ 1.82
TRIM35-203ENST00000521253 ZBTB38Q8NAP3 1195 aaPredicted RBP26.42■■□□□ 1.82
TRIM35-203ENST00000521253 LTBP3Q9NS15 1303 aa26.41■■□□□ 1.82
TRIM35-203ENST00000521253 IGKV5-2P06315 115 aa26.41■■□□□ 1.82
TRIM35-203ENST00000521253 ABCC4O15439 1325 aa26.4■■□□□ 1.82
TRIM35-203ENST00000521253 IRS4O14654 1257 aaPredicted RBP26.4■■□□□ 1.82
TRIM35-203ENST00000521253 NEXNQ0ZGT2 675 aa26.4■■□□□ 1.82
TRIM35-203ENST00000521253 GPBP1L1Q9HC44 474 aaPredicted RBP26.4■■□□□ 1.82
TRIM35-203ENST00000521253 SBF1O95248 1867 aa26.39■■□□□ 1.82
TRIM35-203ENST00000521253 FER1L6Q2WGJ9 1857 aa26.39■■□□□ 1.82
TRIM35-203ENST00000521253 PPEF1O14829 653 aaPredicted RBP26.38■■□□□ 1.81
TRIM35-203ENST00000521253 PCCAP05165 728 aaPredicted RBP26.38■■□□□ 1.81
TRIM35-203ENST00000521253 CWF19L2Q2TBE0 894 aaKnown RBP26.38■■□□□ 1.81
TRIM35-203ENST00000521253 SLC51AQ86UW1 340 aa26.38■■□□□ 1.81
TRIM35-203ENST00000521253 TRMT2AQ8IZ69 625 aaKnown RBP26.38■■□□□ 1.81
TRIM35-203ENST00000521253 RTKN2Q8IZC4 609 aa26.38■■□□□ 1.81
TRIM35-203ENST00000521253 NEURL1BA8MQ27 555 aa26.37■■□□□ 1.81
TRIM35-203ENST00000521253 SF3B3Q15393 1217 aaKnown RBP26.37■■□□□ 1.81
TRIM35-203ENST00000521253 DDX46Q7L014 1031 aaKnown RBP26.37■■□□□ 1.81
TRIM35-203ENST00000521253 DNAAF4Q8WXU2 420 aa26.37■■□□□ 1.81
TRIM35-203ENST00000521253 JARID2Q92833 1246 aaPredicted RBP26.37■■□□□ 1.81
TRIM35-203ENST00000521253 DDX60Q8IY21 1712 aaKnown RBP26.36■■□□□ 1.81
TRIM35-203ENST00000521253 FKBP4Q02790 459 aaKnown RBP eCLIP26.36■■□□□ 1.81
TRIM35-203ENST00000521253 SNED1Q8TER0 1413 aa26.36■■□□□ 1.81
TRIM35-203ENST00000521253 ZC3H4Q9UPT8 1303 aaKnown RBP26.36■■□□□ 1.81
TRIM35-203ENST00000521253 LAMB2P55268 1798 aa26.35■■□□□ 1.81
TRIM35-203ENST00000521253 CC2D2BQ6DHV5 1058 aa26.35■■□□□ 1.81
TRIM35-203ENST00000521253 HSP90B1P14625 803 aaKnown RBP26.34■■□□□ 1.81
TRIM35-203ENST00000521253 GRAPQ13588 217 aa26.34■■□□□ 1.81
TRIM35-203ENST00000521253 GRAPLQ8TC17 118 aaPredicted RBP26.34■■□□□ 1.81
TRIM35-203ENST00000521253 CACNA1FO60840 1977 aa26.34■■□□□ 1.81
TRIM35-203ENST00000521253 F6X3S4 739 aa26.33■■□□□ 1.81
TRIM35-203ENST00000521253 BBOX1O75936 387 aa26.33■■□□□ 1.81
TRIM35-203ENST00000521253 ZNF277Q9NRM2 450 aaPredicted RBP26.33■■□□□ 1.81
TRIM35-203ENST00000521253 ATP6V0A2Q9Y487 856 aa26.33■■□□□ 1.81
TRIM35-203ENST00000521253 LINS1Q8NG48 757 aa26.32■■□□□ 1.8
TRIM35-203ENST00000521253 CDHR2Q9BYE9 1310 aa26.32■■□□□ 1.8
TRIM35-203ENST00000521253 PDE8AO60658 829 aa26.31■■□□□ 1.8
TRIM35-203ENST00000521253 GCKRQ14397 625 aa26.31■■□□□ 1.8
TRIM35-203ENST00000521253 MRPL50Q8N5N7 158 aaKnown RBP26.31■■□□□ 1.8
TRIM35-203ENST00000521253 PSMD1Q99460 953 aa26.31■■□□□ 1.8
TRIM35-203ENST00000521253 GRIPAP1Q4V328 841 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 238.4 ms