RNA–Protein interactions for RNA: ENST00000521163.5

HDAC2-210, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-210ENST00000521163 MYH3P11055 1940 aa12.63□□□□□ -0.39
HDAC2-210ENST00000521163 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
HDAC2-210ENST00000521163 DNAAF4Q8WXU2 420 aa12.63□□□□□ -0.39
HDAC2-210ENST00000521163 UTP14AQ9BVJ6 771 aaKnown RBP12.63□□□□□ -0.39
HDAC2-210ENST00000521163 PDZRN3Q9UPQ7 1066 aa12.63□□□□□ -0.39
HDAC2-210ENST00000521163 CACNA1SQ13698 1873 aa12.63□□□□□ -0.39
HDAC2-210ENST00000521163 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
HDAC2-210ENST00000521163 ATP5J2-PTCD1G3V325 749 aa12.62□□□□□ -0.39
HDAC2-210ENST00000521163 PDE6BP35913 854 aa12.62□□□□□ -0.39
HDAC2-210ENST00000521163 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
HDAC2-210ENST00000521163 NEXNQ0ZGT2 675 aa12.62□□□□□ -0.39
HDAC2-210ENST00000521163 CCDC191Q8NCU4 936 aa12.62□□□□□ -0.39
HDAC2-210ENST00000521163 MYD88Q99836 296 aa12.62□□□□□ -0.39
HDAC2-210ENST00000521163 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
HDAC2-210ENST00000521163 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
HDAC2-210ENST00000521163 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
HDAC2-210ENST00000521163 KLRG2A4D1S0 409 aaPredicted RBP12.61□□□□□ -0.39
HDAC2-210ENST00000521163 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
HDAC2-210ENST00000521163 DPEP1P16444 411 aa12.61□□□□□ -0.39
HDAC2-210ENST00000521163 GTF2E1P29083 439 aaPredicted RBP12.61□□□□□ -0.39
HDAC2-210ENST00000521163 ERFEQ4G0M1 354 aa12.61□□□□□ -0.39
HDAC2-210ENST00000521163 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
HDAC2-210ENST00000521163 CCDC24Q8N4L8 307 aa12.61□□□□□ -0.39
HDAC2-210ENST00000521163 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
HDAC2-210ENST00000521163 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
HDAC2-210ENST00000521163 NEURL1BA8MQ27 555 aa12.6□□□□□ -0.39
HDAC2-210ENST00000521163 CHRNA5P30532 468 aa12.6□□□□□ -0.39
HDAC2-210ENST00000521163 CRY2Q49AN0 593 aa12.6□□□□□ -0.39
HDAC2-210ENST00000521163 C2CD5Q86YS7 1000 aa12.6□□□□□ -0.39
HDAC2-210ENST00000521163 LINS1Q8NG48 757 aa12.6□□□□□ -0.39
HDAC2-210ENST00000521163 TRMT112Q9UI30 125 aaKnown RBP12.6□□□□□ -0.39
HDAC2-210ENST00000521163 F6X3S4 739 aa12.59□□□□□ -0.39
HDAC2-210ENST00000521163 H0YIN7 160 aa12.59□□□□□ -0.39
HDAC2-210ENST00000521163 KCNA3P22001 575 aa12.59□□□□□ -0.39
HDAC2-210ENST00000521163 SLC10A5Q5PT55 438 aa12.59□□□□□ -0.39
HDAC2-210ENST00000521163 ZBTB38Q8NAP3 1195 aaPredicted RBP12.59□□□□□ -0.39
HDAC2-210ENST00000521163 CHD4Q14839 1912 aa12.58□□□□□ -0.39
HDAC2-210ENST00000521163 SLX4Q8IY92 1834 aa12.58□□□□□ -0.4
HDAC2-210ENST00000521163 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
HDAC2-210ENST00000521163 PCCAP05165 728 aaPredicted RBP12.58□□□□□ -0.4
HDAC2-210ENST00000521163 SRGNP10124 158 aa12.58□□□□□ -0.4
HDAC2-210ENST00000521163 YY1P25490 414 aa12.58□□□□□ -0.4
HDAC2-210ENST00000521163 CWF19L2Q2TBE0 894 aaKnown RBP12.58□□□□□ -0.4
HDAC2-210ENST00000521163 BEND3Q5T5X7 828 aa12.58□□□□□ -0.4
HDAC2-210ENST00000521163 STYK1Q6J9G0 422 aa12.58□□□□□ -0.4
HDAC2-210ENST00000521163 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
HDAC2-210ENST00000521163 CDHR2Q9BYE9 1310 aa12.58□□□□□ -0.4
HDAC2-210ENST00000521163 NPR1P16066 1061 aa12.57□□□□□ -0.4
HDAC2-210ENST00000521163 YBX3P16989 372 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC2-210ENST00000521163 GCKRQ14397 625 aa12.57□□□□□ -0.4
HDAC2-210ENST00000521163 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
HDAC2-210ENST00000521163 FAM89AQ96GI7 184 aa12.57□□□□□ -0.4
HDAC2-210ENST00000521163 MASTLQ96GX5 879 aa12.57□□□□□ -0.4
HDAC2-210ENST00000521163 ALDH1L1O75891 902 aa12.56□□□□□ -0.4
HDAC2-210ENST00000521163 HCLS1P14317 486 aaPredicted RBP12.56□□□□□ -0.4
HDAC2-210ENST00000521163 HSP90B1P14625 803 aaKnown RBP12.56□□□□□ -0.4
HDAC2-210ENST00000521163 DALRD3Q5D0E6 543 aaKnown RBP12.56□□□□□ -0.4
HDAC2-210ENST00000521163 C3orf67Q6ZVT6 689 aa12.56□□□□□ -0.4
HDAC2-210ENST00000521163 SYNE4Q8N205 404 aa12.56□□□□□ -0.4
HDAC2-210ENST00000521163 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
HDAC2-210ENST00000521163 YTHDC1Q96MU7 727 aaKnown RBP12.56□□□□□ -0.4
HDAC2-210ENST00000521163 NLRP3Q96P20 1036 aa12.56□□□□□ -0.4
HDAC2-210ENST00000521163 API5Q9BZZ5 524 aaKnown RBP12.56□□□□□ -0.4
HDAC2-210ENST00000521163 NOB1Q9ULX3 412 aaKnown RBP12.56□□□□□ -0.4
HDAC2-210ENST00000521163 FER1L6Q2WGJ9 1857 aa12.56□□□□□ -0.4
HDAC2-210ENST00000521163 LRRC37AA6NMS7 1700 aa12.55□□□□□ -0.4
HDAC2-210ENST00000521163 IRS4O14654 1257 aaPredicted RBP12.55□□□□□ -0.4
HDAC2-210ENST00000521163 BCAR3O75815 825 aa12.55□□□□□ -0.4
HDAC2-210ENST00000521163 HOXA10P31260 410 aaPredicted RBP12.55□□□□□ -0.4
HDAC2-210ENST00000521163 GPR162Q16538 588 aa12.55□□□□□ -0.4
HDAC2-210ENST00000521163 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
HDAC2-210ENST00000521163 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
HDAC2-210ENST00000521163 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
HDAC2-210ENST00000521163 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
HDAC2-210ENST00000521163 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
HDAC2-210ENST00000521163 ABCC4O15439 1325 aa12.55□□□□□ -0.4
HDAC2-210ENST00000521163 TAF1P21675 1872 aa12.55□□□□□ -0.4
HDAC2-210ENST00000521163 H7C1W4 665 aa12.54□□□□□ -0.4
HDAC2-210ENST00000521163 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
HDAC2-210ENST00000521163 GRIN3BO60391 1043 aa12.54□□□□□ -0.4
HDAC2-210ENST00000521163 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
HDAC2-210ENST00000521163 PRPF40BQ6NWY9 871 aaKnown RBP12.54□□□□□ -0.4
HDAC2-210ENST00000521163 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
HDAC2-210ENST00000521163 RPGRQ92834 1020 aaKnown RBP12.54□□□□□ -0.4
HDAC2-210ENST00000521163 ZNF622Q969S3 477 aaKnown RBP eCLIP12.54□□□□□ -0.4
HDAC2-210ENST00000521163 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
HDAC2-210ENST00000521163 GRM8O00222 908 aa12.53□□□□□ -0.4
HDAC2-210ENST00000521163 PDE8AO60658 829 aa12.53□□□□□ -0.4
HDAC2-210ENST00000521163 TRIM27P14373 513 aa12.53□□□□□ -0.4
HDAC2-210ENST00000521163 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
HDAC2-210ENST00000521163 CASP7P55210 303 aa12.53□□□□□ -0.4
HDAC2-210ENST00000521163 SF3B3Q15393 1217 aaKnown RBP12.53□□□□□ -0.4
HDAC2-210ENST00000521163 ATF7IPQ6VMQ6 1270 aa12.53□□□□□ -0.4
HDAC2-210ENST00000521163 CRAMP1Q96RY5 1269 aa12.53□□□□□ -0.4
HDAC2-210ENST00000521163 PLA2G12BQ9BX93 195 aa12.53□□□□□ -0.4
HDAC2-210ENST00000521163 RTL9Q8NET4 1388 aa12.53□□□□□ -0.4
HDAC2-210ENST00000521163 COL4A1P02462 1669 aa12.52□□□□□ -0.4
HDAC2-210ENST00000521163 ALDH1B1P30837 517 aa12.52□□□□□ -0.41
HDAC2-210ENST00000521163 CTSWP56202 376 aa12.52□□□□□ -0.41
HDAC2-210ENST00000521163 ZKSCAN2Q63HK3 967 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms