RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
PVT1-210ENST00000521122 PRUNE2Q8WUY3 3088 aa12.46□□□□□ -0.41
PVT1-210ENST00000521122 TBC1D9BQ66K14 1250 aa12.46□□□□□ -0.41
PVT1-210ENST00000521122 DLK2Q6UY11 383 aa12.46□□□□□ -0.41
PVT1-210ENST00000521122 RASAL3Q86YV0 1011 aa12.46□□□□□ -0.41
PVT1-210ENST00000521122 SNED1Q8TER0 1413 aa12.45□□□□□ -0.42
PVT1-210ENST00000521122 OTOP1Q7RTM1 612 aa12.45□□□□□ -0.42
PVT1-210ENST00000521122 CNBD1Q8NA66 436 aa12.45□□□□□ -0.42
PVT1-210ENST00000521122 TMC1Q8TDI8 760 aa12.45□□□□□ -0.42
PVT1-210ENST00000521122 MTMR10Q9NXD2 777 aa12.45□□□□□ -0.42
PVT1-210ENST00000521122 TERF2IPQ9NYB0 399 aa12.45□□□□□ -0.42
PVT1-210ENST00000521122 TRIM17Q9Y577 477 aa12.45□□□□□ -0.42
PVT1-210ENST00000521122 ANKRD26Q9UPS8 1709 aa12.45□□□□□ -0.42
PVT1-210ENST00000521122 FLT4P35916 1363 aa12.44□□□□□ -0.42
PVT1-210ENST00000521122 NPR1P16066 1061 aa12.44□□□□□ -0.42
PVT1-210ENST00000521122 CABP4P57796 275 aa12.44□□□□□ -0.42
PVT1-210ENST00000521122 ST5P78524 1137 aa12.44□□□□□ -0.42
PVT1-210ENST00000521122 Q7L0L9 218 aa12.44□□□□□ -0.42
PVT1-210ENST00000521122 DNAJC10Q8IXB1 793 aa12.44□□□□□ -0.42
PVT1-210ENST00000521122 CFHR5Q9BXR6 569 aa12.44□□□□□ -0.42
PVT1-210ENST00000521122 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
PVT1-210ENST00000521122 LARGE2Q8N3Y3 721 aa12.43□□□□□ -0.42
PVT1-210ENST00000521122 DPF3Q92784 378 aa12.43□□□□□ -0.42
PVT1-210ENST00000521122 ZBTB1Q9Y2K1 713 aa12.43□□□□□ -0.42
PVT1-210ENST00000521122 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
PVT1-210ENST00000521122 NPHP1O15259 732 aa12.42□□□□□ -0.42
PVT1-210ENST00000521122 HSP90AB1P08238 724 aaKnown RBP12.42□□□□□ -0.42
PVT1-210ENST00000521122 CYP19A1P11511 503 aaPredicted RBP12.42□□□□□ -0.42
PVT1-210ENST00000521122 PPARGC1BQ86YN6 1023 aaKnown RBP12.42□□□□□ -0.42
PVT1-210ENST00000521122 TRPM4Q8TD43 1214 aa12.42□□□□□ -0.42
PVT1-210ENST00000521122 PTPN22Q9Y2R2 807 aa12.42□□□□□ -0.42
PVT1-210ENST00000521122 KIF24Q5T7B8 1368 aa12.42□□□□□ -0.42
PVT1-210ENST00000521122 MRC1P22897 1456 aa12.41□□□□□ -0.42
PVT1-210ENST00000521122 TM4SF4P48230 202 aa12.41□□□□□ -0.42
PVT1-210ENST00000521122 GMPSP49915 693 aaPredicted RBP12.4□□□□□ -0.42
PVT1-210ENST00000521122 KRT26Q7Z3Y9 468 aa12.4□□□□□ -0.42
PVT1-210ENST00000521122 ZNF333Q96JL9 665 aa12.4□□□□□ -0.42
PVT1-210ENST00000521122 R3HDMLQ9H3Y0 253 aa12.4□□□□□ -0.42
PVT1-210ENST00000521122 SYNGAP1Q96PV0 1343 aa12.39□□□□□ -0.43
PVT1-210ENST00000521122 KLRG2A4D1S0 409 aaPredicted RBP12.39□□□□□ -0.43
PVT1-210ENST00000521122 NIM1KQ8IY84 436 aa12.39□□□□□ -0.43
PVT1-210ENST00000521122 NPC1L1Q9UHC9 1359 aa12.39□□□□□ -0.43
PVT1-210ENST00000521122 SCN7AQ01118 1682 aa12.38□□□□□ -0.43
PVT1-210ENST00000521122 WASHC2AQ641Q2 1341 aa12.38□□□□□ -0.43
PVT1-210ENST00000521122 POLR2AP24928 1970 aaKnown RBP12.38□□□□□ -0.43
PVT1-210ENST00000521122 A0A087WZG4 1122 aa12.37□□□□□ -0.43
PVT1-210ENST00000521122 ALDH1B1P30837 517 aa12.37□□□□□ -0.43
PVT1-210ENST00000521122 CXCL9Q07325 125 aa12.37□□□□□ -0.43
PVT1-210ENST00000521122 CC2D2BQ6DHV5 1058 aa12.37□□□□□ -0.43
PVT1-210ENST00000521122 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
PVT1-210ENST00000521122 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
PVT1-210ENST00000521122 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
PVT1-210ENST00000521122 NR2E3Q9Y5X4 410 aa12.37□□□□□ -0.43
PVT1-210ENST00000521122 ADM5C9JUS6 153 aa12.36□□□□□ -0.43
PVT1-210ENST00000521122 ZBTB7BO15156 539 aaPredicted RBP12.36□□□□□ -0.43
PVT1-210ENST00000521122 SLC4A8Q2Y0W8 1093 aa12.36□□□□□ -0.43
PVT1-210ENST00000521122 RPTORQ8N122 1335 aa12.36□□□□□ -0.43
PVT1-210ENST00000521122 WTIPA6NIX2 430 aaPredicted RBP12.35□□□□□ -0.43
PVT1-210ENST00000521122 EIF5P55010 431 aaKnown RBP12.35□□□□□ -0.43
PVT1-210ENST00000521122 EYA1Q99502 592 aa12.35□□□□□ -0.43
PVT1-210ENST00000521122 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
PVT1-210ENST00000521122 TMEM265A0A087WTH1 108 aa12.34□□□□□ -0.43
PVT1-210ENST00000521122 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
PVT1-210ENST00000521122 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
PVT1-210ENST00000521122 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
PVT1-210ENST00000521122 ZNF609O15014 1411 aa12.34□□□□□ -0.43
PVT1-210ENST00000521122 TNFRSF10AO00220 468 aa12.33□□□□□ -0.44
PVT1-210ENST00000521122 FKBP1BP68106 108 aa12.33□□□□□ -0.44
PVT1-210ENST00000521122 SREBF2Q12772 1141 aa12.33□□□□□ -0.44
PVT1-210ENST00000521122 GRIPAP1Q4V328 841 aa12.33□□□□□ -0.44
PVT1-210ENST00000521122 NBPF11Q86T75 865 aa12.33□□□□□ -0.44
PVT1-210ENST00000521122 ERO1AQ96HE7 468 aa12.33□□□□□ -0.44
PVT1-210ENST00000521122 HTATIP2Q9BUP3 242 aa12.33□□□□□ -0.44
PVT1-210ENST00000521122 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
PVT1-210ENST00000521122 NCOR1O75376 2440 aa12.32□□□□□ -0.44
PVT1-210ENST00000521122 SHTN1A0MZ66 631 aa12.32□□□□□ -0.44
PVT1-210ENST00000521122 H7C1D1 291 aa12.32□□□□□ -0.44
PVT1-210ENST00000521122 PPIP5K2O43314 1243 aa12.32□□□□□ -0.44
PVT1-210ENST00000521122 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
PVT1-210ENST00000521122 EFCC1Q9HA90 598 aa12.32□□□□□ -0.44
PVT1-210ENST00000521122 ST20-MTHFSA0A0A6YYL1 179 aa12.31□□□□□ -0.44
PVT1-210ENST00000521122 ALDH1A1P00352 501 aa12.31□□□□□ -0.44
PVT1-210ENST00000521122 MTHFSP49914 203 aa12.31□□□□□ -0.44
PVT1-210ENST00000521122 LRIT3Q3SXY7 679 aa12.31□□□□□ -0.44
PVT1-210ENST00000521122 STAP2Q9UGK3 403 aa12.31□□□□□ -0.44
PVT1-210ENST00000521122 TBC1D2BQ9UPU7 963 aa12.31□□□□□ -0.44
PVT1-210ENST00000521122 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
PVT1-210ENST00000521122 SLC9C1Q4G0N8 1177 aa12.3□□□□□ -0.44
PVT1-210ENST00000521122 NBPF5PQ86XG9 351 aaPredicted RBP12.3□□□□□ -0.44
PVT1-210ENST00000521122 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
PVT1-210ENST00000521122 CD99L2Q8TCZ2 262 aa12.3□□□□□ -0.44
PVT1-210ENST00000521122 CDCA5Q96FF9 252 aa12.3□□□□□ -0.44
PVT1-210ENST00000521122 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
PVT1-210ENST00000521122 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
PVT1-210ENST00000521122 ARIH1Q9Y4X5 557 aaPredicted RBP12.3□□□□□ -0.44
PVT1-210ENST00000521122 BDP1A6H8Y1 2624 aa12.29□□□□□ -0.44
PVT1-210ENST00000521122 FYB1O15117 783 aa12.29□□□□□ -0.44
PVT1-210ENST00000521122 TNIP1Q15025 636 aa12.29□□□□□ -0.44
PVT1-210ENST00000521122 AOC3Q16853 763 aa12.29□□□□□ -0.44
PVT1-210ENST00000521122 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms