RNA–Protein interactions for RNA: ENST00000521009.5

GABRP-208, Transcript of gamma-aminobutyric acid type A receptor pi subunit, humanhuman

TSL 4

Gene GABRP, Length 456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRP-208ENST00000521009 SUSD4Q5VX71 490 aa11.92□□□□□ -0.5
GABRP-208ENST00000521009 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
GABRP-208ENST00000521009 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
GABRP-208ENST00000521009 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
GABRP-208ENST00000521009 CRAMP1Q96RY5 1269 aa11.92□□□□□ -0.5
GABRP-208ENST00000521009 EIF2S2P20042 333 aaKnown RBP11.91□□□□□ -0.5
GABRP-208ENST00000521009 GPTP24298 496 aa11.91□□□□□ -0.5
GABRP-208ENST00000521009 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
GABRP-208ENST00000521009 NEUROD2Q15784 382 aa11.91□□□□□ -0.5
GABRP-208ENST00000521009 DNAJC5GQ8N7S2 189 aa11.91□□□□□ -0.5
GABRP-208ENST00000521009 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
GABRP-208ENST00000521009 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.5
GABRP-208ENST00000521009 FAM177BA6PVY3 158 aa11.9□□□□□ -0.5
GABRP-208ENST00000521009 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
GABRP-208ENST00000521009 COPS6Q7L5N1 327 aa11.9□□□□□ -0.5
GABRP-208ENST00000521009 RPGRQ92834 1020 aaKnown RBP11.9□□□□□ -0.5
GABRP-208ENST00000521009 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
GABRP-208ENST00000521009 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.5
GABRP-208ENST00000521009 ADAMTSL1Q8N6G6 1762 aa11.9□□□□□ -0.51
GABRP-208ENST00000521009 DDX60Q8IY21 1712 aaKnown RBP11.89□□□□□ -0.51
GABRP-208ENST00000521009 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
GABRP-208ENST00000521009 TCIRG1Q13488 830 aa11.89□□□□□ -0.51
GABRP-208ENST00000521009 HDGFL1Q5TGJ6 251 aa11.89□□□□□ -0.51
GABRP-208ENST00000521009 NLRP10Q86W26 655 aa11.89□□□□□ -0.51
GABRP-208ENST00000521009 XAGE3Q8WTP9 111 aa11.89□□□□□ -0.51
GABRP-208ENST00000521009 RBM17Q96I25 401 aaKnown RBP11.89□□□□□ -0.51
GABRP-208ENST00000521009 UTP14AQ9BVJ6 771 aaKnown RBP11.89□□□□□ -0.51
GABRP-208ENST00000521009 CHPF2Q9P2E5 772 aa11.89□□□□□ -0.51
GABRP-208ENST00000521009 FZD9O00144 591 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 APAF1O14727 1248 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 ANXA1P04083 346 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 IARSP41252 1262 aaKnown RBP11.88□□□□□ -0.51
GABRP-208ENST00000521009 GNAI1P63096 354 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 CCDC27Q2M243 656 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 NLRP3Q96P20 1036 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 CHMP4AQ9BY43 222 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 VPS33BQ9H267 617 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 MBIPQ9NS73 344 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 HYPKQ9NX55 129 aa11.88□□□□□ -0.51
GABRP-208ENST00000521009 COL4A5P29400 1685 aa11.87□□□□□ -0.51
GABRP-208ENST00000521009 TRIM28Q13263 835 aaKnown RBP11.87□□□□□ -0.51
GABRP-208ENST00000521009 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
GABRP-208ENST00000521009 ZNF277Q9NRM2 450 aaPredicted RBP11.87□□□□□ -0.51
GABRP-208ENST00000521009 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
GABRP-208ENST00000521009 DDNO94850 711 aaPredicted RBP11.86□□□□□ -0.51
GABRP-208ENST00000521009 OLFM4Q6UX06 510 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 C3orf67Q6ZVT6 689 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 JMYQ8N9B5 988 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 KLRG1Q96E93 195 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 RTFDC1Q9BY42 306 aaPredicted RBP11.86□□□□□ -0.51
GABRP-208ENST00000521009 ATP6V0A2Q9Y487 856 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 ABCC4O15439 1325 aa11.86□□□□□ -0.51
GABRP-208ENST00000521009 BBOX1O75936 387 aa11.85□□□□□ -0.51
GABRP-208ENST00000521009 AIMP1Q12904 312 aaKnown RBP11.85□□□□□ -0.51
GABRP-208ENST00000521009 TMC4Q7Z404 712 aa11.85□□□□□ -0.51
GABRP-208ENST00000521009 GPC2Q8N158 579 aa11.85□□□□□ -0.51
GABRP-208ENST00000521009 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
GABRP-208ENST00000521009 LAS1LQ9Y4W2 734 aaKnown RBP11.85□□□□□ -0.51
GABRP-208ENST00000521009 ZNF541Q9H0D2 1346 aa11.85□□□□□ -0.51
GABRP-208ENST00000521009 DUOX1Q9NRD9 1551 aa11.84□□□□□ -0.51
GABRP-208ENST00000521009 LTBP1Q14766 1721 aa11.84□□□□□ -0.51
GABRP-208ENST00000521009 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
GABRP-208ENST00000521009 LDHDQ86WU2 507 aa11.84□□□□□ -0.51
GABRP-208ENST00000521009 JDP2Q8WYK2 163 aa11.84□□□□□ -0.51
GABRP-208ENST00000521009 TAF1DQ9H5J8 278 aaPredicted RBP11.84□□□□□ -0.51
GABRP-208ENST00000521009 TRMT112Q9UI30 125 aaKnown RBP11.84□□□□□ -0.51
GABRP-208ENST00000521009 IL16Q14005 1332 aa11.84□□□□□ -0.51
GABRP-208ENST00000521009 CACNA1FO60840 1977 aa11.83□□□□□ -0.52
GABRP-208ENST00000521009 GRAPQ13588 217 aa11.83□□□□□ -0.52
GABRP-208ENST00000521009 SF3B3Q15393 1217 aaKnown RBP11.83□□□□□ -0.52
GABRP-208ENST00000521009 SP8Q8IXZ3 490 aa11.83□□□□□ -0.52
GABRP-208ENST00000521009 GRAPLQ8TC17 118 aaPredicted RBP11.83□□□□□ -0.52
GABRP-208ENST00000521009 HACL1Q9UJ83 578 aa11.83□□□□□ -0.52
GABRP-208ENST00000521009 PASKQ96RG2 1323 aa11.83□□□□□ -0.52
GABRP-208ENST00000521009 GOLGA2Q08379 1002 aa11.82□□□□□ -0.52
GABRP-208ENST00000521009 DDX46Q7L014 1031 aaKnown RBP11.82□□□□□ -0.52
GABRP-208ENST00000521009 PNMA8AQ86V59 439 aaPredicted RBP11.82□□□□□ -0.52
GABRP-208ENST00000521009 SUPT20HQ8NEM7 779 aa11.82□□□□□ -0.52
GABRP-208ENST00000521009 TMX4Q9H1E5 349 aaPredicted RBP11.82□□□□□ -0.52
GABRP-208ENST00000521009 CDHR2Q9BYE9 1310 aa11.82□□□□□ -0.52
GABRP-208ENST00000521009 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
GABRP-208ENST00000521009 HSP90B1P14625 803 aaKnown RBP11.81□□□□□ -0.52
GABRP-208ENST00000521009 EIF6P56537 245 aaKnown RBP11.81□□□□□ -0.52
GABRP-208ENST00000521009 LARGE2Q8N3Y3 721 aa11.81□□□□□ -0.52
GABRP-208ENST00000521009 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
GABRP-208ENST00000521009 TAF1P21675 1872 aa11.8□□□□□ -0.52
GABRP-208ENST00000521009 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
GABRP-208ENST00000521009 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
GABRP-208ENST00000521009 POTEJP0CG39 1038 aa11.8□□□□□ -0.52
GABRP-208ENST00000521009 EPHX2P34913 555 aa11.8□□□□□ -0.52
GABRP-208ENST00000521009 HTRA3P83110 453 aa11.8□□□□□ -0.52
GABRP-208ENST00000521009 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
GABRP-208ENST00000521009 CCDC184Q52MB2 194 aa11.8□□□□□ -0.52
GABRP-208ENST00000521009 CCDC30Q5VVM6 783 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms