RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 K7ELQ4 463 aaPredicted RBP12.15□□□□□ -0.46
SPARC-202ENST00000520687 MCM2P49736 904 aa12.15□□□□□ -0.46
SPARC-202ENST00000520687 EVA1CP58658 441 aa12.15□□□□□ -0.46
SPARC-202ENST00000520687 PROSER3Q2NL68 480 aa12.15□□□□□ -0.46
SPARC-202ENST00000520687 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
SPARC-202ENST00000520687 CLASRPQ8N2M8 674 aaKnown RBP12.15□□□□□ -0.46
SPARC-202ENST00000520687 IL17RAQ96F46 866 aa12.15□□□□□ -0.46
SPARC-202ENST00000520687 ST18O60284 1047 aa12.14□□□□□ -0.47
SPARC-202ENST00000520687 GLRX3O76003 335 aaKnown RBP12.14□□□□□ -0.47
SPARC-202ENST00000520687 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
SPARC-202ENST00000520687 SLKQ9H2G2 1235 aaPredicted RBP12.14□□□□□ -0.47
SPARC-202ENST00000520687 WWC3Q9ULE0 1092 aa12.14□□□□□ -0.47
SPARC-202ENST00000520687 WNK3Q9BYP7 1800 aa12.14□□□□□ -0.47
SPARC-202ENST00000520687 ANXA1P04083 346 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 CHMLP26374 656 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 DDIT3P35638 169 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 SLC39A6Q13433 755 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 OS9Q13438 667 aaPredicted RBP12.13□□□□□ -0.47
SPARC-202ENST00000520687 GCKRQ14397 625 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 JMYQ8N9B5 988 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 PLBD2Q8NHP8 589 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 TEX13AQ9BXU3 409 aaPredicted RBP12.13□□□□□ -0.47
SPARC-202ENST00000520687 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 NEURL1BA8MQ27 555 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 COPS6Q7L5N1 327 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 CNTROBQ8N137 903 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
SPARC-202ENST00000520687 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
SPARC-202ENST00000520687 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
SPARC-202ENST00000520687 FRAT2O75474 233 aaPredicted RBP12.12□□□□□ -0.47
SPARC-202ENST00000520687 HSP90AA1P07900 732 aaKnown RBP12.12□□□□□ -0.47
SPARC-202ENST00000520687 G3BP1Q13283 466 aaKnown RBP eCLIP12.12□□□□□ -0.47
SPARC-202ENST00000520687 GSE1Q14687 1217 aa12.12□□□□□ -0.47
SPARC-202ENST00000520687 LRP10Q7Z4F1 713 aa12.12□□□□□ -0.47
SPARC-202ENST00000520687 RUFY2Q8WXA3 655 aa12.12□□□□□ -0.47
SPARC-202ENST00000520687 PRAMEF22A3QJZ6 481 aa12.11□□□□□ -0.47
SPARC-202ENST00000520687 HIP1O00291 1037 aa12.11□□□□□ -0.47
SPARC-202ENST00000520687 IGKV5-2P06315 115 aa12.11□□□□□ -0.47
SPARC-202ENST00000520687 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
SPARC-202ENST00000520687 TICAM2Q86XR7 235 aa12.11□□□□□ -0.47
SPARC-202ENST00000520687 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
SPARC-202ENST00000520687 ZNF526Q8TF50 670 aaPredicted RBP12.11□□□□□ -0.47
SPARC-202ENST00000520687 KLRG1Q96E93 195 aa12.11□□□□□ -0.47
SPARC-202ENST00000520687 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
SPARC-202ENST00000520687 LAMB4A4D0S4 1761 aa12.11□□□□□ -0.47
SPARC-202ENST00000520687 DDX11L8A8MPP1 907 aa12.1□□□□□ -0.47
SPARC-202ENST00000520687 IFIT2P09913 472 aaKnown RBP12.1□□□□□ -0.47
SPARC-202ENST00000520687 POLD1P28340 1107 aa12.1□□□□□ -0.47
SPARC-202ENST00000520687 CWF19L2Q2TBE0 894 aaKnown RBP12.1□□□□□ -0.47
SPARC-202ENST00000520687 PROM2Q8N271 834 aa12.1□□□□□ -0.47
SPARC-202ENST00000520687 PI4K2BQ8TCG2 481 aa12.1□□□□□ -0.47
SPARC-202ENST00000520687 RILPL2Q969X0 211 aa12.1□□□□□ -0.47
SPARC-202ENST00000520687 THRAP3Q9Y2W1 955 aaKnown RBP12.1□□□□□ -0.47
SPARC-202ENST00000520687 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
SPARC-202ENST00000520687 MYL6BP14649 208 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 SUCLG2Q96I99 432 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 GBP4Q96PP9 640 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 IL1RAPL2Q9NP60 686 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 COPRSQ9NQ92 184 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 WDR90Q96KV7 1748 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 TNS2Q63HR2 1409 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 PAPPAQ13219 1627 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 MCM4P33991 863 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 RABL6Q3YEC7 729 aaPredicted RBP12.09□□□□□ -0.47
SPARC-202ENST00000520687 MYD88Q99836 296 aa12.09□□□□□ -0.47
SPARC-202ENST00000520687 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
SPARC-202ENST00000520687 BICC1Q9H694 974 aaKnown RBP12.09□□□□□ -0.47
SPARC-202ENST00000520687 KIF3CO14782 793 aa12.08□□□□□ -0.48
SPARC-202ENST00000520687 YBX3P16989 372 aaKnown RBP eCLIP12.08□□□□□ -0.48
SPARC-202ENST00000520687 NUCB2P80303 420 aa12.08□□□□□ -0.48
SPARC-202ENST00000520687 CLEC17AQ6ZS10 378 aa12.08□□□□□ -0.48
SPARC-202ENST00000520687 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
SPARC-202ENST00000520687 EVI5LQ96CN4 794 aa12.08□□□□□ -0.48
SPARC-202ENST00000520687 KAZALD1Q96I82 304 aa12.08□□□□□ -0.48
SPARC-202ENST00000520687 C5P01031 1676 aa12.08□□□□□ -0.48
SPARC-202ENST00000520687 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
SPARC-202ENST00000520687 KIAA1211Q6ZU35 1233 aa12.07□□□□□ -0.48
SPARC-202ENST00000520687 TMOD3Q9NYL9 352 aa12.07□□□□□ -0.48
SPARC-202ENST00000520687 H7C1W4 665 aa12.06□□□□□ -0.48
SPARC-202ENST00000520687 SGSM2O43147 1006 aa12.06□□□□□ -0.48
SPARC-202ENST00000520687 TOMM70O94826 608 aa12.06□□□□□ -0.48
SPARC-202ENST00000520687 SKOR2Q2VWA4 1001 aaPredicted RBP12.06□□□□□ -0.48
SPARC-202ENST00000520687 CCDC191Q8NCU4 936 aa12.06□□□□□ -0.48
SPARC-202ENST00000520687 ANO2Q9NQ90 1003 aa12.06□□□□□ -0.48
SPARC-202ENST00000520687 ATG3Q9NT62 314 aa12.06□□□□□ -0.48
SPARC-202ENST00000520687 TRIM28Q13263 835 aaKnown RBP12.05□□□□□ -0.48
SPARC-202ENST00000520687 DDX54Q8TDD1 881 aaKnown RBP12.05□□□□□ -0.48
SPARC-202ENST00000520687 SLC16A10Q8TF71 515 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 CWC25Q9NXE8 425 aaPredicted RBP12.05□□□□□ -0.48
SPARC-202ENST00000520687 RAD50Q92878 1312 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 A0A087WZG4 1122 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 GOLGA6L22H0YM25 854 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 STARD3NLO95772 234 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 HSPA4P34932 840 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 AACSQ86V21 672 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms