RNA–Protein interactions for RNA: ENST00000520618.5

SNX16-208, Transcript of sorting nexin 16, human

TSL 3

Gene SNX16, Length 669 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX16-208	ENST00000520618	ST5	P78524	1137 aa		11.77	□□□□□ -0.53
SNX16-208	ENST00000520618	RGMB	Q6NW40	437 aa		11.77	□□□□□ -0.53
SNX16-208	ENST00000520618	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.77	□□□□□ -0.53
SNX16-208	ENST00000520618	PGAP2	Q9UHJ9	254 aa		11.77	□□□□□ -0.53
SNX16-208	ENST00000520618	MKI67	P46013	3256 aa	Known RBP	11.76	□□□□□ -0.53
SNX16-208	ENST00000520618	ST20-MTHFS	A0A0A6YYL1	179 aa		11.76	□□□□□ -0.53
SNX16-208	ENST00000520618	MTHFS	P49914	203 aa		11.76	□□□□□ -0.53
SNX16-208	ENST00000520618	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.76	□□□□□ -0.53
SNX16-208	ENST00000520618	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.76	□□□□□ -0.53
SNX16-208	ENST00000520618	PSMD1	Q99460	953 aa		11.76	□□□□□ -0.53
SNX16-208	ENST00000520618	PPM1G	O15355	546 aa	Predicted RBP	11.75	□□□□□ -0.53
SNX16-208	ENST00000520618	NPR1	P16066	1061 aa		11.75	□□□□□ -0.53
SNX16-208	ENST00000520618	MNX1	P50219	401 aa	Predicted RBP	11.75	□□□□□ -0.53
SNX16-208	ENST00000520618	EIF5	P55010	431 aa	Known RBP	11.75	□□□□□ -0.53
SNX16-208	ENST00000520618	CCDC102A	Q96A19	550 aa		11.75	□□□□□ -0.53
SNX16-208	ENST00000520618	PLSCR2	Q9NRY7	297 aa		11.75	□□□□□ -0.53
SNX16-208	ENST00000520618		A0A087WZG4	1122 aa		11.74	□□□□□ -0.53
SNX16-208	ENST00000520618	NPHP1	O15259	732 aa		11.74	□□□□□ -0.53
SNX16-208	ENST00000520618	MKRN4P	Q13434	485 aa	Predicted RBP	11.74	□□□□□ -0.53
SNX16-208	ENST00000520618	CSRNP1	Q96S65	589 aa		11.74	□□□□□ -0.53
SNX16-208	ENST00000520618	GPRC5D	Q9NZD1	345 aa		11.74	□□□□□ -0.53
SNX16-208	ENST00000520618	HDAC9	Q9UKV0	1011 aa		11.74	□□□□□ -0.53
SNX16-208	ENST00000520618		A0A0C4DFX4	3053 aa		11.73	□□□□□ -0.53
SNX16-208	ENST00000520618	KLRG2	A4D1S0	409 aa	Predicted RBP	11.73	□□□□□ -0.53
SNX16-208	ENST00000520618	CANX	P27824	592 aa	Known RBP	11.73	□□□□□ -0.53
SNX16-208	ENST00000520618	AMOT	Q4VCS5	1084 aa		11.73	□□□□□ -0.53
SNX16-208	ENST00000520618	CDC37L1	Q7L3B6	337 aa		11.73	□□□□□ -0.53
SNX16-208	ENST00000520618	ZC3H15	Q8WU90	426 aa	Known RBP	11.73	□□□□□ -0.53
SNX16-208	ENST00000520618	POTEF	A5A3E0	1075 aa		11.72	□□□□□ -0.53
SNX16-208	ENST00000520618	PRR29	P0C7W0	189 aa		11.72	□□□□□ -0.53
SNX16-208	ENST00000520618	EIF4A2	Q14240	407 aa	Known RBP	11.72	□□□□□ -0.53
SNX16-208	ENST00000520618	C1orf141	Q5JVX7	400 aa		11.72	□□□□□ -0.53
SNX16-208	ENST00000520618	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.72	□□□□□ -0.53
SNX16-208	ENST00000520618	SETDB2	Q96T68	719 aa		11.72	□□□□□ -0.53
SNX16-208	ENST00000520618	CARD11	Q9BXL7	1154 aa		11.72	□□□□□ -0.53
SNX16-208	ENST00000520618	SLC10A3	P09131	477 aa		11.71	□□□□□ -0.53
SNX16-208	ENST00000520618	OTUD5	Q96G74	571 aa		11.71	□□□□□ -0.53
SNX16-208	ENST00000520618	MRC1	P22897	1456 aa		11.7	□□□□□ -0.54
SNX16-208	ENST00000520618	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.7	□□□□□ -0.54
SNX16-208	ENST00000520618	ZNF157	P51786	506 aa	Predicted RBP	11.7	□□□□□ -0.54
SNX16-208	ENST00000520618	HIRA	P54198	1017 aa	Predicted RBP	11.7	□□□□□ -0.54
SNX16-208	ENST00000520618	VSIG10	Q8N0Z9	540 aa		11.7	□□□□□ -0.54
SNX16-208	ENST00000520618	LARGE2	Q8N3Y3	721 aa		11.7	□□□□□ -0.54
SNX16-208	ENST00000520618	TESK2	Q96S53	571 aa		11.7	□□□□□ -0.54
SNX16-208	ENST00000520618	GBA2	Q9HCG7	927 aa	Predicted RBP	11.7	□□□□□ -0.54
SNX16-208	ENST00000520618	CAMTA2	O94983	1202 aa		11.69	□□□□□ -0.54
SNX16-208	ENST00000520618	SLC39A6	Q13433	755 aa		11.69	□□□□□ -0.54
SNX16-208	ENST00000520618	NOM1	Q5C9Z4	860 aa	Known RBP	11.69	□□□□□ -0.54
SNX16-208	ENST00000520618	SLC52A2	Q9HAB3	445 aa		11.69	□□□□□ -0.54
SNX16-208	ENST00000520618	TBC1D2B	Q9UPU7	963 aa		11.69	□□□□□ -0.54
SNX16-208	ENST00000520618	CDHR2	Q9BYE9	1310 aa		11.68	□□□□□ -0.54
SNX16-208	ENST00000520618	INTS3	Q68E01	1043 aa	Known RBP	11.68	□□□□□ -0.54
SNX16-208	ENST00000520618	CC2D2B	Q6DHV5	1058 aa		11.68	□□□□□ -0.54
SNX16-208	ENST00000520618	USP48	Q86UV5	1035 aa		11.68	□□□□□ -0.54
SNX16-208	ENST00000520618	NIM1K	Q8IY84	436 aa		11.68	□□□□□ -0.54
SNX16-208	ENST00000520618	C2orf69	Q8N8R5	385 aa		11.68	□□□□□ -0.54
SNX16-208	ENST00000520618	TRPM4	Q8TD43	1214 aa		11.68	□□□□□ -0.54
SNX16-208	ENST00000520618	POLK	Q9UBT6	870 aa		11.68	□□□□□ -0.54
SNX16-208	ENST00000520618	PAPPA2	Q9BXP8	1791 aa		11.68	□□□□□ -0.54
SNX16-208	ENST00000520618	NPC1L1	Q9UHC9	1359 aa		11.67	□□□□□ -0.54
SNX16-208	ENST00000520618	STARD3NL	O95772	234 aa		11.67	□□□□□ -0.54
SNX16-208	ENST00000520618	ALDH1B1	P30837	517 aa		11.67	□□□□□ -0.54
SNX16-208	ENST00000520618	GMPS	P49915	693 aa	Predicted RBP	11.67	□□□□□ -0.54
SNX16-208	ENST00000520618	DLK2	Q6UY11	383 aa		11.67	□□□□□ -0.54
SNX16-208	ENST00000520618	GPR25	O00155	361 aa		11.66	□□□□□ -0.54
SNX16-208	ENST00000520618	CD44	P16070	742 aa	Known RBP	11.66	□□□□□ -0.54
SNX16-208	ENST00000520618	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.66	□□□□□ -0.54
SNX16-208	ENST00000520618	UBR2	Q8IWV8	1755 aa		11.66	□□□□□ -0.54
SNX16-208	ENST00000520618		H0YGN5	161 aa		11.65	□□□□□ -0.54
SNX16-208	ENST00000520618	TBC1D8	O95759	1140 aa		11.65	□□□□□ -0.54
SNX16-208	ENST00000520618	IL6ST	P40189	918 aa	Predicted RBP	11.65	□□□□□ -0.54
SNX16-208	ENST00000520618	CXCL9	Q07325	125 aa		11.65	□□□□□ -0.54
SNX16-208	ENST00000520618	RASAL3	Q86YV0	1011 aa		11.65	□□□□□ -0.54
SNX16-208	ENST00000520618	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.65	□□□□□ -0.54
SNX16-208	ENST00000520618	COL6A3	P12111	3177 aa		11.65	□□□□□ -0.54
SNX16-208	ENST00000520618	EN2	P19622	333 aa	Predicted RBP	11.64	□□□□□ -0.55
SNX16-208	ENST00000520618	GRIPAP1	Q4V328	841 aa		11.64	□□□□□ -0.55
SNX16-208	ENST00000520618	PPIP5K2	O43314	1243 aa		11.63	□□□□□ -0.55
SNX16-208	ENST00000520618	CLCN6	P51797	869 aa		11.63	□□□□□ -0.55
SNX16-208	ENST00000520618	KRT26	Q7Z3Y9	468 aa		11.63	□□□□□ -0.55
SNX16-208	ENST00000520618	AEBP1	Q8IUX7	1158 aa		11.63	□□□□□ -0.55
SNX16-208	ENST00000520618	RBM27	Q9P2N5	1060 aa	Known RBP	11.63	□□□□□ -0.55
SNX16-208	ENST00000520618	SLC24A1	O60721	1099 aa		11.62	□□□□□ -0.55
SNX16-208	ENST00000520618	FKTN	O75072	461 aa		11.62	□□□□□ -0.55
SNX16-208	ENST00000520618	CARD14	Q9BXL6	1004 aa		11.62	□□□□□ -0.55
SNX16-208	ENST00000520618	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.62	□□□□□ -0.55
SNX16-208	ENST00000520618	LGR6	Q9HBX8	967 aa		11.62	□□□□□ -0.55
SNX16-208	ENST00000520618	ZNRF3	Q9ULT6	936 aa		11.62	□□□□□ -0.55
SNX16-208	ENST00000520618	HTT	P42858	3142 aa		11.61	□□□□□ -0.55
SNX16-208	ENST00000520618	RANBP2	P49792	3224 aa	Known RBP	11.61	□□□□□ -0.55
SNX16-208	ENST00000520618	SHTN1	A0MZ66	631 aa		11.61	□□□□□ -0.55
SNX16-208	ENST00000520618	AOC3	Q16853	763 aa		11.61	□□□□□ -0.55
SNX16-208	ENST00000520618	CRY2	Q49AN0	593 aa		11.61	□□□□□ -0.55
SNX16-208	ENST00000520618	CLEC4G	Q6UXB4	293 aa		11.61	□□□□□ -0.55
SNX16-208	ENST00000520618	TPTE2	Q6XPS3	522 aa		11.61	□□□□□ -0.55
SNX16-208	ENST00000520618	DZIP3	Q86Y13	1208 aa	Known RBP	11.61	□□□□□ -0.55
SNX16-208	ENST00000520618	BCL2L13	Q9BXK5	485 aa		11.61	□□□□□ -0.55
SNX16-208	ENST00000520618	POLR2A	P24928	1970 aa	Known RBP	11.6	□□□□□ -0.55
SNX16-208	ENST00000520618	ADM5	C9JUS6	153 aa		11.6	□□□□□ -0.55
SNX16-208	ENST00000520618	RNMT	O43148	476 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms