RNA–Protein interactions for RNA: ENST00000520571.1

DENND3-213, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-213ENST00000520571 ANKRD36CQ5JPF3 1778 aa17.73■□□□□ 0.43
DENND3-213ENST00000520571 CACNA1SQ13698 1873 aa17.73■□□□□ 0.43
DENND3-213ENST00000520571 C21orf2O43822 256 aa17.72■□□□□ 0.43
DENND3-213ENST00000520571 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
DENND3-213ENST00000520571 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
DENND3-213ENST00000520571 NPR1P16066 1061 aa17.72■□□□□ 0.43
DENND3-213ENST00000520571 IBTKQ9P2D0 1353 aaPredicted RBP17.71■□□□□ 0.43
DENND3-213ENST00000520571 PRPF40BQ6NWY9 871 aaKnown RBP17.71■□□□□ 0.43
DENND3-213ENST00000520571 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
DENND3-213ENST00000520571 SLX4Q8IY92 1834 aa17.7■□□□□ 0.42
DENND3-213ENST00000520571 KLRG2A4D1S0 409 aaPredicted RBP17.7■□□□□ 0.42
DENND3-213ENST00000520571 VAMP4O75379 141 aa17.7■□□□□ 0.42
DENND3-213ENST00000520571 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
DENND3-213ENST00000520571 MYD88Q99836 296 aa17.7■□□□□ 0.42
DENND3-213ENST00000520571 ZNF521Q96K83 1311 aa17.7■□□□□ 0.42
DENND3-213ENST00000520571 ARFGEF2Q9Y6D5 1785 aa17.69■□□□□ 0.42
DENND3-213ENST00000520571 TNRC6CQ9HCJ0 1690 aaKnown RBP17.69■□□□□ 0.42
DENND3-213ENST00000520571 HCLS1P14317 486 aaPredicted RBP17.69■□□□□ 0.42
DENND3-213ENST00000520571 RASSF7Q02833 373 aa17.69■□□□□ 0.42
DENND3-213ENST00000520571 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
DENND3-213ENST00000520571 C9orf131Q5VYM1 1079 aa17.69■□□□□ 0.42
DENND3-213ENST00000520571 C3orf67Q6ZVT6 689 aa17.69■□□□□ 0.42
DENND3-213ENST00000520571 G2E3Q7L622 706 aa17.69■□□□□ 0.42
DENND3-213ENST00000520571 ZNF526Q8TF50 670 aaPredicted RBP17.69■□□□□ 0.42
DENND3-213ENST00000520571 NLRP3Q96P20 1036 aa17.69■□□□□ 0.42
DENND3-213ENST00000520571 ISCA1Q9BUE6 129 aa17.69■□□□□ 0.42
DENND3-213ENST00000520571 SH3TC1Q8TE82 1336 aa17.69■□□□□ 0.42
DENND3-213ENST00000520571 MAP3K2Q9Y2U5 619 aa17.68■□□□□ 0.42
DENND3-213ENST00000520571 PI4KAP2A4QPH2 592 aa17.67■□□□□ 0.42
DENND3-213ENST00000520571 ALDH1B1P30837 517 aa17.67■□□□□ 0.42
DENND3-213ENST00000520571 SLC10A5Q5PT55 438 aa17.67■□□□□ 0.42
DENND3-213ENST00000520571 PI4KAP1Q8N8J0 262 aa17.67■□□□□ 0.42
DENND3-213ENST00000520571 FAM89AQ96GI7 184 aa17.67■□□□□ 0.42
DENND3-213ENST00000520571 RNF181Q9P0P0 153 aa17.67■□□□□ 0.42
DENND3-213ENST00000520571 E9PSI1 815 aa17.66■□□□□ 0.42
DENND3-213ENST00000520571 CRY2Q49AN0 593 aa17.66■□□□□ 0.42
DENND3-213ENST00000520571 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
DENND3-213ENST00000520571 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
DENND3-213ENST00000520571 RBM17Q96I25 401 aaKnown RBP17.66■□□□□ 0.42
DENND3-213ENST00000520571 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
DENND3-213ENST00000520571 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
DENND3-213ENST00000520571 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
DENND3-213ENST00000520571 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.42
DENND3-213ENST00000520571 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
DENND3-213ENST00000520571 NFKBIEO00221 500 aa17.64■□□□□ 0.41
DENND3-213ENST00000520571 SLFN5Q08AF3 891 aa17.64■□□□□ 0.41
DENND3-213ENST00000520571 FLIIQ13045 1269 aa17.64■□□□□ 0.41
DENND3-213ENST00000520571 TRIM28Q13263 835 aaKnown RBP17.64■□□□□ 0.41
DENND3-213ENST00000520571 SOGA3Q5TF21 947 aa17.64■□□□□ 0.41
DENND3-213ENST00000520571 OLFM4Q6UX06 510 aa17.64■□□□□ 0.41
DENND3-213ENST00000520571 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
DENND3-213ENST00000520571 CWC25Q9NXE8 425 aaPredicted RBP17.64■□□□□ 0.41
DENND3-213ENST00000520571 SBF1O95248 1867 aa17.64■□□□□ 0.41
DENND3-213ENST00000520571 CCDC88AQ3V6T2 1871 aa17.63■□□□□ 0.41
DENND3-213ENST00000520571 LMNB1P20700 586 aa17.63■□□□□ 0.41
DENND3-213ENST00000520571 HOXA10P31260 410 aaPredicted RBP17.63■□□□□ 0.41
DENND3-213ENST00000520571 NEXNQ0ZGT2 675 aa17.63■□□□□ 0.41
DENND3-213ENST00000520571 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
DENND3-213ENST00000520571 TAOK3Q9H2K8 898 aa17.63■□□□□ 0.41
DENND3-213ENST00000520571 GPBP1L1Q9HC44 474 aaPredicted RBP17.63■□□□□ 0.41
DENND3-213ENST00000520571 ADCY9O60503 1353 aa17.63■□□□□ 0.41
DENND3-213ENST00000520571 IRS4O14654 1257 aaPredicted RBP17.62■□□□□ 0.41
DENND3-213ENST00000520571 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
DENND3-213ENST00000520571 C7orf43Q8WVR3 580 aa17.62■□□□□ 0.41
DENND3-213ENST00000520571 PPEF1O14829 653 aaPredicted RBP17.61■□□□□ 0.41
DENND3-213ENST00000520571 PRELPP51888 382 aa17.61■□□□□ 0.41
DENND3-213ENST00000520571 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
DENND3-213ENST00000520571 ZBTB38Q8NAP3 1195 aaPredicted RBP17.61■□□□□ 0.41
DENND3-213ENST00000520571 CRAMP1Q96RY5 1269 aa17.61■□□□□ 0.41
DENND3-213ENST00000520571 LAMB2P55268 1798 aa17.61■□□□□ 0.41
DENND3-213ENST00000520571 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
DENND3-213ENST00000520571 CWF19L2Q2TBE0 894 aaKnown RBP17.6■□□□□ 0.41
DENND3-213ENST00000520571 TMX4Q9H1E5 349 aaPredicted RBP17.6■□□□□ 0.41
DENND3-213ENST00000520571 ABCC4O15439 1325 aa17.59■□□□□ 0.41
DENND3-213ENST00000520571 IGKV5-2P06315 115 aa17.59■□□□□ 0.41
DENND3-213ENST00000520571 RTKN2Q8IZC4 609 aa17.59■□□□□ 0.41
DENND3-213ENST00000520571 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
DENND3-213ENST00000520571 DDX60Q8IY21 1712 aaKnown RBP17.58■□□□□ 0.41
DENND3-213ENST00000520571 F6X3S4 739 aa17.58■□□□□ 0.4
DENND3-213ENST00000520571 PCCAP05165 728 aaPredicted RBP17.58■□□□□ 0.4
DENND3-213ENST00000520571 HNRNPUQ00839 825 aaKnown RBP eCLIP17.58■□□□□ 0.4
DENND3-213ENST00000520571 TAF1P21675 1872 aa17.58■□□□□ 0.4
DENND3-213ENST00000520571 NEURL1BA8MQ27 555 aa17.57■□□□□ 0.4
DENND3-213ENST00000520571 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
DENND3-213ENST00000520571 SLC51AQ86UW1 340 aa17.57■□□□□ 0.4
DENND3-213ENST00000520571 CCDC85AQ96PX6 553 aaPredicted RBP17.57■□□□□ 0.4
DENND3-213ENST00000520571 ZNF277Q9NRM2 450 aaPredicted RBP17.57■□□□□ 0.4
DENND3-213ENST00000520571 LTBP3Q9NS15 1303 aa17.56■□□□□ 0.4
DENND3-213ENST00000520571 BBOX1O75936 387 aa17.56■□□□□ 0.4
DENND3-213ENST00000520571 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
DENND3-213ENST00000520571 CC2D2BQ6DHV5 1058 aa17.56■□□□□ 0.4
DENND3-213ENST00000520571 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
DENND3-213ENST00000520571 GRAPQ13588 217 aa17.55■□□□□ 0.4
DENND3-213ENST00000520571 SF3B3Q15393 1217 aaKnown RBP17.55■□□□□ 0.4
DENND3-213ENST00000520571 TRMT2AQ8IZ69 625 aaKnown RBP17.55■□□□□ 0.4
DENND3-213ENST00000520571 LINS1Q8NG48 757 aa17.55■□□□□ 0.4
DENND3-213ENST00000520571 GRAPLQ8TC17 118 aaPredicted RBP17.55■□□□□ 0.4
DENND3-213ENST00000520571 SSH1Q8WYL5 1049 aa17.55■□□□□ 0.4
DENND3-213ENST00000520571 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
DENND3-213ENST00000520571 ATP6V0A2Q9Y487 856 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms