RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 APBA3O96018 575 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 LMOD1P29536 600 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 SEC13P55735 322 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 USP17L24Q0WX57 530 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 DPYDQ12882 1025 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 LAMC2Q13753 1193 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 CFAP70Q5T0N1 1121 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 C1orf53Q5VUE5 145 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 NBPF11Q86T75 865 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 RHPN1Q8TCX5 695 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 HSH2DQ96JZ2 352 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 PHACTR1Q9C0D0 580 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 MARK1Q9P0L2 795 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 HCN4Q9Y3Q4 1203 aa6.3□□□□□ -1.4
TRAPPC13-212ENST00000520525 FAM196BA6NMK8 535 aa6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 PPP1R12BO60237 982 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 ALAS2P22557 587 aa6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 LARP1Q6PKG0 1096 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 STAG2Q8N3U4 1231 aa6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 ARXQ96QS3 562 aa6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 C2orf49Q9BVC5 232 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 RBM19Q9Y4C8 960 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 ATAD2Q6PL18 1390 aa6.29□□□□□ -1.4
TRAPPC13-212ENST00000520525 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
TRAPPC13-212ENST00000520525 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
TRAPPC13-212ENST00000520525 LGR5O75473 907 aa6.28□□□□□ -1.4
TRAPPC13-212ENST00000520525 SFSWAPQ12872 951 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-212ENST00000520525 CCDC82Q8N4S0 544 aa6.28□□□□□ -1.4
TRAPPC13-212ENST00000520525 ZNF280CQ8ND82 737 aa6.28□□□□□ -1.4
TRAPPC13-212ENST00000520525 SCG3Q8WXD2 468 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-212ENST00000520525 ADARB2-AS1A8MUL3 147 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 TYRO3Q06418 890 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 TRIM28Q13263 835 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 SYT9Q86SS6 491 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 ANKMY2Q8IV38 441 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 ALDH16A1Q8IZ83 802 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 GAS2L2Q8NHY3 880 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 SUSD3Q96L08 255 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 SLC30A3Q99726 388 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 VRTNQ9H8Y1 702 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 PRDM6Q9NQX0 595 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 SERPINA10Q9UK55 444 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 CHMP3Q9Y3E7 222 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 STARD13Q9Y3M8 1113 aa6.27□□□□□ -1.41
TRAPPC13-212ENST00000520525 BTBD11A6QL63 1104 aa6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 M0R082 166 aa6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 SIN3BO75182 1162 aa6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 H2AFB1P0C5Y9 115 aa6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 H2AFB2P0C5Z0 115 aa6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 GRIK4Q16099 956 aa6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 ZNF417Q8TAU3 575 aa6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 CCDC97Q96F63 343 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 NACC1Q96RE7 527 aa6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 ZNF587Q96SQ5 575 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC13-212ENST00000520525 HYAL3O43820 417 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 IGFBP4P22692 258 aa6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 KCNQ4P56696 695 aa6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 LRP8Q14114 963 aa6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 MICALL1Q8N3F8 863 aa6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 CHMP7Q8WUX9 453 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 ARID3AQ99856 593 aa6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 HINFPQ9BQA5 517 aa6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 NEUROD4Q9HD90 331 aa6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 BRD7Q9NPI1 651 aa6.25□□□□□ -1.41
TRAPPC13-212ENST00000520525 NID1P14543 1247 aa6.24□□□□□ -1.41
TRAPPC13-212ENST00000520525 C8orf86Q6ZUL3 223 aa6.24□□□□□ -1.41
TRAPPC13-212ENST00000520525 NGLY1Q96IV0 654 aa6.24□□□□□ -1.41
TRAPPC13-212ENST00000520525 CEP63Q96MT8 703 aa6.24□□□□□ -1.41
TRAPPC13-212ENST00000520525 GOLGA2P5Q9HBQ8 144 aa6.24□□□□□ -1.41
TRAPPC13-212ENST00000520525 ANKIB1Q9P2G1 1089 aa6.24□□□□□ -1.41
TRAPPC13-212ENST00000520525 ALBP02768 609 aa6.23□□□□□ -1.41
TRAPPC13-212ENST00000520525 WEE1P30291 646 aa6.23□□□□□ -1.41
TRAPPC13-212ENST00000520525 SPEM2Q0P670 501 aa6.23□□□□□ -1.41
TRAPPC13-212ENST00000520525 BTLAQ7Z6A9 289 aa6.23□□□□□ -1.41
TRAPPC13-212ENST00000520525 RAB44Q7Z6P3 723 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-212ENST00000520525 BCS1LQ9Y276 419 aa6.23□□□□□ -1.41
TRAPPC13-212ENST00000520525 C9orf172C9J069 976 aa6.22□□□□□ -1.41
TRAPPC13-212ENST00000520525 ADGRE1Q14246 886 aa6.22□□□□□ -1.41
TRAPPC13-212ENST00000520525 RTN1Q16799 776 aa6.22□□□□□ -1.41
TRAPPC13-212ENST00000520525 CDCA8Q53HL2 280 aa6.22□□□□□ -1.41
TRAPPC13-212ENST00000520525 C20orf204Q6ZNR8 217 aa6.22□□□□□ -1.41
TRAPPC13-212ENST00000520525 TNFRSF25Q93038 417 aa6.22□□□□□ -1.41
TRAPPC13-212ENST00000520525 DMGDHQ9UI17 866 aaKnown RBP6.22□□□□□ -1.41
TRAPPC13-212ENST00000520525 KCNH4Q9UQ05 1017 aa6.22□□□□□ -1.41
TRAPPC13-212ENST00000520525 SELPP16109 830 aa6.21□□□□□ -1.42
TRAPPC13-212ENST00000520525 RFX1P22670 979 aa6.21□□□□□ -1.42
TRAPPC13-212ENST00000520525 MBTPS1Q14703 1052 aa6.21□□□□□ -1.42
TRAPPC13-212ENST00000520525 IER5Q5VY09 327 aa6.21□□□□□ -1.42
TRAPPC13-212ENST00000520525 QTRT2Q9H974 415 aaKnown RBP6.21□□□□□ -1.42
TRAPPC13-212ENST00000520525 TGFBR3LH3BV60 316 aa6.2□□□□□ -1.42
TRAPPC13-212ENST00000520525 GRNP28799 593 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-212ENST00000520525 SRPK2P78362 688 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-212ENST00000520525 TRAPPC3LQ5T215 181 aa6.2□□□□□ -1.42
TRAPPC13-212ENST00000520525 ZMIZ1Q9ULJ6 1067 aa6.2□□□□□ -1.42
TRAPPC13-212ENST00000520525 NOVA2Q9UNW9 492 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-212ENST00000520525 FOXO3O43524 673 aa6.19□□□□□ -1.42
TRAPPC13-212ENST00000520525 HIF1AQ16665 826 aa6.19□□□□□ -1.42
TRAPPC13-212ENST00000520525 TXNRD3Q86VQ6 643 aa6.19□□□□□ -1.42
TRAPPC13-212ENST00000520525 FAM200AQ8TCP9 573 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms