RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
CTHRC1-203ENST00000520337 TMEM94Q12767 1356 aa10.57□□□□□ -0.72
CTHRC1-203ENST00000520337 PDXDC2PQ6P474 469 aa10.57□□□□□ -0.72
CTHRC1-203ENST00000520337 TRIM46Q7Z4K8 759 aa10.57□□□□□ -0.72
CTHRC1-203ENST00000520337 MORC1Q86VD1 984 aa10.57□□□□□ -0.72
CTHRC1-203ENST00000520337 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
CTHRC1-203ENST00000520337 FKBPLQ9UIM3 349 aa10.57□□□□□ -0.72
CTHRC1-203ENST00000520337 BMP1P13497 986 aa10.56□□□□□ -0.72
CTHRC1-203ENST00000520337 TIMP2P16035 220 aa10.56□□□□□ -0.72
CTHRC1-203ENST00000520337 WDR4P57081 412 aaKnown RBP10.56□□□□□ -0.72
CTHRC1-203ENST00000520337 NEUROD2Q15784 382 aa10.56□□□□□ -0.72
CTHRC1-203ENST00000520337 LRRN4Q8WUT4 740 aa10.56□□□□□ -0.72
CTHRC1-203ENST00000520337 KLF16Q9BXK1 252 aaPredicted RBP10.56□□□□□ -0.72
CTHRC1-203ENST00000520337 GGNBP2Q9H3C7 697 aa10.56□□□□□ -0.72
CTHRC1-203ENST00000520337 USP6P35125 1406 aa10.56□□□□□ -0.72
CTHRC1-203ENST00000520337 ZNF335Q9H4Z2 1342 aaPredicted RBP10.56□□□□□ -0.72
CTHRC1-203ENST00000520337 LRRC7Q96NW7 1537 aa10.55□□□□□ -0.72
CTHRC1-203ENST00000520337 AP1G2O75843 785 aa10.55□□□□□ -0.72
CTHRC1-203ENST00000520337 GRM5P41594 1212 aa10.55□□□□□ -0.72
CTHRC1-203ENST00000520337 C14orf37Q86TY3 774 aa10.55□□□□□ -0.72
CTHRC1-203ENST00000520337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.55□□□□□ -0.72
CTHRC1-203ENST00000520337 PMFBP1Q8TBY8 1022 aa10.55□□□□□ -0.72
CTHRC1-203ENST00000520337 MAGEB6P1A0A0J9YX57 407 aa10.54□□□□□ -0.72
CTHRC1-203ENST00000520337 NME9Q86XW9 330 aa10.54□□□□□ -0.72
CTHRC1-203ENST00000520337 FAM9BQ8IZU0 186 aa10.54□□□□□ -0.72
CTHRC1-203ENST00000520337 PNMA1Q8ND90 353 aa10.54□□□□□ -0.72
CTHRC1-203ENST00000520337 PCMTD1Q96MG8 357 aaPredicted RBP10.54□□□□□ -0.72
CTHRC1-203ENST00000520337 MARF1Q9Y4F3 1742 aaKnown RBP10.54□□□□□ -0.72
CTHRC1-203ENST00000520337 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
CTHRC1-203ENST00000520337 DCCP43146 1447 aa10.53□□□□□ -0.72
CTHRC1-203ENST00000520337 INSM1Q01101 510 aaPredicted RBP10.53□□□□□ -0.72
CTHRC1-203ENST00000520337 GPSM3Q9Y4H4 160 aa10.53□□□□□ -0.72
CTHRC1-203ENST00000520337 MST1RQ04912 1400 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 RFC5P40937 340 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 TNNT2P45379 298 aaPredicted RBP10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 SCARF1Q14162 830 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 NR6A1Q15406 480 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 VASH1Q7L8A9 365 aaPredicted RBP10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 NGDNQ8NEJ9 315 aaKnown RBP10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 ARHGAP9Q9BRR9 750 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 C1orf167Q5SNV9 1468 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 PIK3C2AO00443 1686 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 KIF1AQ12756 1690 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 SHPRHQ149N8 1683 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 USP54Q70EL1 1684 aa10.52□□□□□ -0.73
CTHRC1-203ENST00000520337 ZIC2O95409 532 aaPredicted RBP10.51□□□□□ -0.73
CTHRC1-203ENST00000520337 NR3C2P08235 984 aa10.51□□□□□ -0.73
CTHRC1-203ENST00000520337 USP17L8P0C7I0 530 aa10.51□□□□□ -0.73
CTHRC1-203ENST00000520337 ATF3P18847 181 aa10.51□□□□□ -0.73
CTHRC1-203ENST00000520337 MTHFSP49914 203 aa10.51□□□□□ -0.73
CTHRC1-203ENST00000520337 ESCO1Q5FWF5 840 aa10.51□□□□□ -0.73
CTHRC1-203ENST00000520337 ORAI2Q96SN7 254 aa10.51□□□□□ -0.73
CTHRC1-203ENST00000520337 TTC21AQ8NDW8 1320 aa10.51□□□□□ -0.73
CTHRC1-203ENST00000520337 TRPM3Q9HCF6 1732 aaPredicted RBP10.5□□□□□ -0.73
CTHRC1-203ENST00000520337 FSHRP23945 695 aa10.5□□□□□ -0.73
CTHRC1-203ENST00000520337 TMEM259Q4ZIN3 620 aa10.5□□□□□ -0.73
CTHRC1-203ENST00000520337 ZFP42Q96MM3 310 aa10.5□□□□□ -0.73
CTHRC1-203ENST00000520337 MSH6P52701 1360 aa10.5□□□□□ -0.73
CTHRC1-203ENST00000520337 USP31Q70CQ4 1352 aa10.5□□□□□ -0.73
CTHRC1-203ENST00000520337 OVOS2A0A0J9YW53 1432 aa10.5□□□□□ -0.73
CTHRC1-203ENST00000520337 OVOS2Q6IE36 1432 aa10.5□□□□□ -0.73
CTHRC1-203ENST00000520337 FBLN1P23142 703 aa10.49□□□□□ -0.73
CTHRC1-203ENST00000520337 PTK2Q05397 1052 aa10.49□□□□□ -0.73
CTHRC1-203ENST00000520337 ITPKCQ96DU7 683 aa10.49□□□□□ -0.73
CTHRC1-203ENST00000520337 INSRP06213 1382 aa10.49□□□□□ -0.73
CTHRC1-203ENST00000520337 COL3A1P02461 1466 aaPredicted RBP10.49□□□□□ -0.73
CTHRC1-203ENST00000520337 LTBP4Q8N2S1 1624 aa10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 TERTO14746 1132 aaKnown RBP10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 BRPF1P55201 1214 aaPredicted RBP10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 SLC10A4Q96EP9 437 aa10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 COG3Q96JB2 828 aa10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 ADAMTS8Q9UP79 889 aa10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 GTF3C3Q9Y5Q9 886 aa10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 EMILIN1Q9Y6C2 1016 aa10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 AATKQ6ZMQ8 1374 aa10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 PNPLA6Q8IY17 1366 aa10.48□□□□□ -0.73
CTHRC1-203ENST00000520337 FOXO3O43524 673 aa10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 HNRNPUQ00839 825 aaKnown RBP eCLIP10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 PSME1Q06323 249 aa10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 ZBTB33Q86T24 672 aa10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 NPAS3Q8IXF0 933 aa10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 CCDC116Q8IYX3 515 aa10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 IL27Q8NEV9 243 aa10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 ZFAND3Q9H8U3 227 aa10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 POLKQ9UBT6 870 aa10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 BLMP54132 1417 aaPredicted RBP10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 SMG6Q86US8 1419 aaKnown RBP10.47□□□□□ -0.73
CTHRC1-203ENST00000520337 ALS2Q96Q42 1657 aa10.46□□□□□ -0.74
CTHRC1-203ENST00000520337 PEAK1Q9H792 1746 aa10.46□□□□□ -0.74
CTHRC1-203ENST00000520337 UPP2O95045 317 aa10.45□□□□□ -0.74
CTHRC1-203ENST00000520337 MEIOBQ8N635 442 aa10.45□□□□□ -0.74
CTHRC1-203ENST00000520337 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
CTHRC1-203ENST00000520337 HMX1Q9NP08 348 aaPredicted RBP10.45□□□□□ -0.74
CTHRC1-203ENST00000520337 NXF1Q9UBU9 619 aaKnown RBP10.45□□□□□ -0.74
CTHRC1-203ENST00000520337 XPCQ01831 940 aaPredicted RBP10.44□□□□□ -0.74
CTHRC1-203ENST00000520337 WDR43Q15061 677 aaKnown RBP eCLIP10.44□□□□□ -0.74
CTHRC1-203ENST00000520337 KRT28Q7Z3Y7 464 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms