RNA–Protein interactions for RNA: ENST00000520229.1

PDGFRB-206, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-206ENST00000520229 TWISTNBQ3B726 338 aaPredicted RBP19.92■□□□□ 0.78
PDGFRB-206ENST00000520229 UTP14AQ9BVJ6 771 aaKnown RBP19.92■□□□□ 0.78
PDGFRB-206ENST00000520229 DICER1Q9UPY3 1922 aaKnown RBP19.92■□□□□ 0.78
PDGFRB-206ENST00000520229 ANKRD36CQ5JPF3 1778 aa19.91■□□□□ 0.78
PDGFRB-206ENST00000520229 SLX4Q8IY92 1834 aa19.91■□□□□ 0.78
PDGFRB-206ENST00000520229 CACNA1SQ13698 1873 aa19.91■□□□□ 0.78
PDGFRB-206ENST00000520229 KLRG2A4D1S0 409 aaPredicted RBP19.91■□□□□ 0.78
PDGFRB-206ENST00000520229 NMRK2Q9NPI5 230 aa19.91■□□□□ 0.78
PDGFRB-206ENST00000520229 RIC1Q4ADV7 1423 aa19.91■□□□□ 0.78
PDGFRB-206ENST00000520229 NFKBIEO00221 500 aa19.9■□□□□ 0.78
PDGFRB-206ENST00000520229 HSPA6P17066 643 aa19.9■□□□□ 0.78
PDGFRB-206ENST00000520229 RASSF7Q02833 373 aa19.9■□□□□ 0.78
PDGFRB-206ENST00000520229 PRPF40BQ6NWY9 871 aaKnown RBP19.9■□□□□ 0.78
PDGFRB-206ENST00000520229 NLRP10Q86W26 655 aa19.9■□□□□ 0.78
PDGFRB-206ENST00000520229 STK31Q9BXU1 1019 aa19.9■□□□□ 0.78
PDGFRB-206ENST00000520229 MYH16Q9H6N6 1097 aa19.9■□□□□ 0.78
PDGFRB-206ENST00000520229 PHAXQ9H814 394 aaKnown RBP19.9■□□□□ 0.78
PDGFRB-206ENST00000520229 ZNF219Q9P2Y4 722 aaPredicted RBP19.9■□□□□ 0.78
PDGFRB-206ENST00000520229 C21orf2O43822 256 aa19.89■□□□□ 0.77
PDGFRB-206ENST00000520229 RNF123Q5XPI4 1314 aa19.89■□□□□ 0.77
PDGFRB-206ENST00000520229 DIEXFQ68CQ4 756 aaKnown RBP19.89■□□□□ 0.77
PDGFRB-206ENST00000520229 RIC3Q7Z5B4 369 aa19.89■□□□□ 0.77
PDGFRB-206ENST00000520229 TCERG1O14776 1098 aaKnown RBP19.87■□□□□ 0.77
PDGFRB-206ENST00000520229 DDX58O95786 925 aaKnown RBP19.87■□□□□ 0.77
PDGFRB-206ENST00000520229 RPGRQ92834 1020 aaKnown RBP19.87■□□□□ 0.77
PDGFRB-206ENST00000520229 SPINK5Q9NQ38 1064 aaPredicted RBP19.87■□□□□ 0.77
PDGFRB-206ENST00000520229 RNF181Q9P0P0 153 aa19.87■□□□□ 0.77
PDGFRB-206ENST00000520229 TRMT112Q9UI30 125 aaKnown RBP19.87■□□□□ 0.77
PDGFRB-206ENST00000520229 ZNF521Q96K83 1311 aa19.86■□□□□ 0.77
PDGFRB-206ENST00000520229 EXOSC9Q06265 439 aaKnown RBP19.86■□□□□ 0.77
PDGFRB-206ENST00000520229 CRY2Q49AN0 593 aa19.86■□□□□ 0.77
PDGFRB-206ENST00000520229 ISCA1Q9BUE6 129 aa19.86■□□□□ 0.77
PDGFRB-206ENST00000520229 WDR90Q96KV7 1748 aa19.85■□□□□ 0.77
PDGFRB-206ENST00000520229 SH3TC1Q8TE82 1336 aa19.85■□□□□ 0.77
PDGFRB-206ENST00000520229 ZC3H4Q9UPT8 1303 aaKnown RBP19.85■□□□□ 0.77
PDGFRB-206ENST00000520229 ATP5J2-PTCD1G3V325 749 aa19.85■□□□□ 0.77
PDGFRB-206ENST00000520229 ALDH1B1P30837 517 aa19.85■□□□□ 0.77
PDGFRB-206ENST00000520229 SOGA3Q5TF21 947 aa19.85■□□□□ 0.77
PDGFRB-206ENST00000520229 NLRP3Q96P20 1036 aa19.85■□□□□ 0.77
PDGFRB-206ENST00000520229 ZNF428Q96B54 188 aa19.84■□□□□ 0.77
PDGFRB-206ENST00000520229 PCNTO95613 3336 aa19.84■□□□□ 0.77
PDGFRB-206ENST00000520229 SNED1Q8TER0 1413 aa19.84■□□□□ 0.77
PDGFRB-206ENST00000520229 TOMM70O94826 608 aa19.83■□□□□ 0.77
PDGFRB-206ENST00000520229 SLC4A2P04920 1241 aa19.83■□□□□ 0.77
PDGFRB-206ENST00000520229 LMNB1P20700 586 aa19.83■□□□□ 0.77
PDGFRB-206ENST00000520229 SLC10A5Q5PT55 438 aa19.83■□□□□ 0.77
PDGFRB-206ENST00000520229 RBM17Q96I25 401 aaKnown RBP19.83■□□□□ 0.77
PDGFRB-206ENST00000520229 MYD88Q99836 296 aa19.83■□□□□ 0.77
PDGFRB-206ENST00000520229 VAMP4O75379 141 aa19.82■□□□□ 0.76
PDGFRB-206ENST00000520229 HCLS1P14317 486 aaPredicted RBP19.82■□□□□ 0.76
PDGFRB-206ENST00000520229 HOXA10P31260 410 aaPredicted RBP19.82■□□□□ 0.76
PDGFRB-206ENST00000520229 TRIM28Q13263 835 aaKnown RBP19.82■□□□□ 0.76
PDGFRB-206ENST00000520229 CCDC93Q567U6 631 aa19.82■□□□□ 0.76
PDGFRB-206ENST00000520229 C3orf67Q6ZVT6 689 aa19.82■□□□□ 0.76
PDGFRB-206ENST00000520229 SYNE4Q8N205 404 aa19.81■□□□□ 0.76
PDGFRB-206ENST00000520229 C7orf43Q8WVR3 580 aa19.81■□□□□ 0.76
PDGFRB-206ENST00000520229 METTL22Q9BUU2 404 aaPredicted RBP19.81■□□□□ 0.76
PDGFRB-206ENST00000520229 TAOK3Q9H2K8 898 aa19.81■□□□□ 0.76
PDGFRB-206ENST00000520229 MAP3K2Q9Y2U5 619 aa19.81■□□□□ 0.76
PDGFRB-206ENST00000520229 LTBP3Q9NS15 1303 aa19.8■□□□□ 0.76
PDGFRB-206ENST00000520229 PI4KAP2A4QPH2 592 aa19.8■□□□□ 0.76
PDGFRB-206ENST00000520229 KSR2Q6VAB6 950 aa19.8■□□□□ 0.76
PDGFRB-206ENST00000520229 G2E3Q7L622 706 aa19.8■□□□□ 0.76
PDGFRB-206ENST00000520229 MIER1Q8N108 512 aa19.8■□□□□ 0.76
PDGFRB-206ENST00000520229 PI4KAP1Q8N8J0 262 aa19.8■□□□□ 0.76
PDGFRB-206ENST00000520229 RBM46Q8TBY0 533 aaKnown RBP19.8■□□□□ 0.76
PDGFRB-206ENST00000520229 FAM89AQ96GI7 184 aa19.8■□□□□ 0.76
PDGFRB-206ENST00000520229 CRAMP1Q96RY5 1269 aa19.8■□□□□ 0.76
PDGFRB-206ENST00000520229 E9PSI1 815 aa19.79■□□□□ 0.76
PDGFRB-206ENST00000520229 FLIIQ13045 1269 aa19.79■□□□□ 0.76
PDGFRB-206ENST00000520229 NEXNQ0ZGT2 675 aa19.78■□□□□ 0.76
PDGFRB-206ENST00000520229 RTL5Q5HYW3 569 aaPredicted RBP19.78■□□□□ 0.76
PDGFRB-206ENST00000520229 DNAJC5GQ8N7S2 189 aa19.78■□□□□ 0.76
PDGFRB-206ENST00000520229 CCDC191Q8NCU4 936 aa19.78■□□□□ 0.76
PDGFRB-206ENST00000520229 CWC25Q9NXE8 425 aaPredicted RBP19.78■□□□□ 0.76
PDGFRB-206ENST00000520229 POTECB2RU33 542 aa19.77■□□□□ 0.76
PDGFRB-206ENST00000520229 PPEF1O14829 653 aaPredicted RBP19.77■□□□□ 0.76
PDGFRB-206ENST00000520229 FKBP5Q13451 457 aaPredicted RBP19.77■□□□□ 0.76
PDGFRB-206ENST00000520229 OLFM4Q6UX06 510 aa19.77■□□□□ 0.76
PDGFRB-206ENST00000520229 RTKN2Q8IZC4 609 aa19.77■□□□□ 0.76
PDGFRB-206ENST00000520229 ZBTB38Q8NAP3 1195 aaPredicted RBP19.77■□□□□ 0.76
PDGFRB-206ENST00000520229 ABCC4O15439 1325 aa19.76■□□□□ 0.75
PDGFRB-206ENST00000520229 KDM2BQ8NHM5 1336 aa19.76■□□□□ 0.75
PDGFRB-206ENST00000520229 IRS4O14654 1257 aaPredicted RBP19.76■□□□□ 0.75
PDGFRB-206ENST00000520229 FKBP4Q02790 459 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDGFRB-206ENST00000520229 DDX46Q7L014 1031 aaKnown RBP19.76■□□□□ 0.75
PDGFRB-206ENST00000520229 LAMB2P55268 1798 aa19.75■□□□□ 0.75
PDGFRB-206ENST00000520229 GLTPD2A6NH11 291 aa19.75■□□□□ 0.75
PDGFRB-206ENST00000520229 HSP90B1P14625 803 aaKnown RBP19.75■□□□□ 0.75
PDGFRB-206ENST00000520229 CC2D2BQ6DHV5 1058 aa19.75■□□□□ 0.75
PDGFRB-206ENST00000520229 RRAGCQ9HB90 399 aa19.75■□□□□ 0.75
PDGFRB-206ENST00000520229 DDX60Q8IY21 1712 aaKnown RBP19.75■□□□□ 0.75
PDGFRB-206ENST00000520229 PCCAP05165 728 aaPredicted RBP19.74■□□□□ 0.75
PDGFRB-206ENST00000520229 SLFN5Q08AF3 891 aa19.74■□□□□ 0.75
PDGFRB-206ENST00000520229 TMX4Q9H1E5 349 aaPredicted RBP19.74■□□□□ 0.75
PDGFRB-206ENST00000520229 IGKV5-2P06315 115 aa19.73■□□□□ 0.75
PDGFRB-206ENST00000520229 APLP1P51693 650 aa19.73■□□□□ 0.75
PDGFRB-206ENST00000520229 CACNA1FO60840 1977 aa19.73■□□□□ 0.75
PDGFRB-206ENST00000520229 COL4A5P29400 1685 aa19.72■□□□□ 0.75
PDGFRB-206ENST00000520229 FSTL1Q12841 308 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms