RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 HOXA10P31260 410 aaPredicted RBP20.38■□□□□ 0.85
CLK4-205ENST00000520199 DNAJC5GQ8N7S2 189 aa20.38■□□□□ 0.85
CLK4-205ENST00000520199 RBM46Q8TBY0 533 aaKnown RBP20.38■□□□□ 0.85
CLK4-205ENST00000520199 AIMP1Q12904 312 aaKnown RBP20.37■□□□□ 0.85
CLK4-205ENST00000520199 NYXQ9GZU5 481 aa20.37■□□□□ 0.85
CLK4-205ENST00000520199 SLC10A5Q5PT55 438 aa20.36■□□□□ 0.85
CLK4-205ENST00000520199 DUSP27Q5VZP5 1158 aa20.36■□□□□ 0.85
CLK4-205ENST00000520199 ZNF428Q96B54 188 aa20.36■□□□□ 0.85
CLK4-205ENST00000520199 HTRA3P83110 453 aa20.35■□□□□ 0.85
CLK4-205ENST00000520199 NLRP10Q86W26 655 aa20.35■□□□□ 0.85
CLK4-205ENST00000520199 ZNF277Q9NRM2 450 aaPredicted RBP20.35■□□□□ 0.85
CLK4-205ENST00000520199 DDNO94850 711 aaPredicted RBP20.34■□□□□ 0.85
CLK4-205ENST00000520199 FKBP4Q02790 459 aaKnown RBP eCLIP20.34■□□□□ 0.85
CLK4-205ENST00000520199 TCIRG1Q13488 830 aa20.34■□□□□ 0.85
CLK4-205ENST00000520199 CCDC93Q567U6 631 aa20.34■□□□□ 0.85
CLK4-205ENST00000520199 C8orf58Q8NAV2 365 aa20.34■□□□□ 0.85
CLK4-205ENST00000520199 HOXB7P09629 217 aa20.33■□□□□ 0.85
CLK4-205ENST00000520199 GTF2E1P29083 439 aaPredicted RBP20.33■□□□□ 0.85
CLK4-205ENST00000520199 PARP10Q53GL7 1025 aa20.33■□□□□ 0.85
CLK4-205ENST00000520199 HDGFL1Q5TGJ6 251 aa20.33■□□□□ 0.85
CLK4-205ENST00000520199 SCN4AP35499 1836 aa20.32■□□□□ 0.84
CLK4-205ENST00000520199 VEGFAP15692 232 aaPredicted RBP20.32■□□□□ 0.84
CLK4-205ENST00000520199 ALDH1B1P30837 517 aa20.32■□□□□ 0.84
CLK4-205ENST00000520199 SOGA3Q5TF21 947 aa20.32■□□□□ 0.84
CLK4-205ENST00000520199 UTP14AQ9BVJ6 771 aaKnown RBP20.32■□□□□ 0.84
CLK4-205ENST00000520199 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
CLK4-205ENST00000520199 ZNF541Q9H0D2 1346 aa20.31■□□□□ 0.84
CLK4-205ENST00000520199 ZNF316A6NFI3 1004 aaPredicted RBP20.31■□□□□ 0.84
CLK4-205ENST00000520199 POTEIP0CG38 1075 aa20.31■□□□□ 0.84
CLK4-205ENST00000520199 POTEJP0CG39 1038 aa20.31■□□□□ 0.84
CLK4-205ENST00000520199 TSPYL6Q8N831 410 aa20.31■□□□□ 0.84
CLK4-205ENST00000520199 CRAMP1Q96RY5 1269 aa20.31■□□□□ 0.84
CLK4-205ENST00000520199 ISCA1Q9BUE6 129 aa20.31■□□□□ 0.84
CLK4-205ENST00000520199 LTBP1Q14766 1721 aa20.3■□□□□ 0.84
CLK4-205ENST00000520199 ELL2O00472 640 aaPredicted RBP20.3■□□□□ 0.84
CLK4-205ENST00000520199 HCLS1P14317 486 aaPredicted RBP20.3■□□□□ 0.84
CLK4-205ENST00000520199 ZEB1P37275 1124 aaPredicted RBP20.3■□□□□ 0.84
CLK4-205ENST00000520199 FSTL1Q12841 308 aa20.3■□□□□ 0.84
CLK4-205ENST00000520199 PPP1R42Q7Z4L9 355 aa20.3■□□□□ 0.84
CLK4-205ENST00000520199 PHAXQ9H814 394 aaKnown RBP20.3■□□□□ 0.84
CLK4-205ENST00000520199 ADAMTSL1Q8N6G6 1762 aa20.29■□□□□ 0.84
CLK4-205ENST00000520199 APLP1P51693 650 aa20.29■□□□□ 0.84
CLK4-205ENST00000520199 RTKN2Q8IZC4 609 aa20.29■□□□□ 0.84
CLK4-205ENST00000520199 PLBD2Q8NHP8 589 aa20.29■□□□□ 0.84
CLK4-205ENST00000520199 DBF4Q9UBU7 674 aaPredicted RBP20.29■□□□□ 0.84
CLK4-205ENST00000520199 LRRC37AA6NMS7 1700 aa20.28■□□□□ 0.84
CLK4-205ENST00000520199 ANKRD13DQ6ZTN6 518 aa20.28■□□□□ 0.84
CLK4-205ENST00000520199 PSMD1Q99460 953 aa20.28■□□□□ 0.84
CLK4-205ENST00000520199 ABCC4O15439 1325 aa20.27■□□□□ 0.84
CLK4-205ENST00000520199 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.84
CLK4-205ENST00000520199 FZD9O00144 591 aa20.27■□□□□ 0.84
CLK4-205ENST00000520199 IARSP41252 1262 aaKnown RBP20.27■□□□□ 0.84
CLK4-205ENST00000520199 GNAI1P63096 354 aa20.27■□□□□ 0.84
CLK4-205ENST00000520199 C16orf71Q8IYS4 520 aaPredicted RBP20.27■□□□□ 0.84
CLK4-205ENST00000520199 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.84
CLK4-205ENST00000520199 DUOX1Q9NRD9 1551 aa20.26■□□□□ 0.83
CLK4-205ENST00000520199 TCERG1O14776 1098 aaKnown RBP20.26■□□□□ 0.83
CLK4-205ENST00000520199 DPY19L2Q6NUT2 758 aa20.26■□□□□ 0.83
CLK4-205ENST00000520199 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
CLK4-205ENST00000520199 TSR2Q969E8 191 aaKnown RBP20.26■□□□□ 0.83
CLK4-205ENST00000520199 L3MBTL3Q96JM7 780 aaPredicted RBP20.26■□□□□ 0.83
CLK4-205ENST00000520199 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
CLK4-205ENST00000520199 SMC1BQ8NDV3 1235 aa20.25■□□□□ 0.83
CLK4-205ENST00000520199 RBM17Q96I25 401 aaKnown RBP20.25■□□□□ 0.83
CLK4-205ENST00000520199 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
CLK4-205ENST00000520199 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
CLK4-205ENST00000520199 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
CLK4-205ENST00000520199 PPEF1O14829 653 aaPredicted RBP20.24■□□□□ 0.83
CLK4-205ENST00000520199 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
CLK4-205ENST00000520199 FAM89AQ96GI7 184 aa20.24■□□□□ 0.83
CLK4-205ENST00000520199 TRMT112Q9UI30 125 aaKnown RBP20.24■□□□□ 0.83
CLK4-205ENST00000520199 TRIM28Q13263 835 aaKnown RBP20.23■□□□□ 0.83
CLK4-205ENST00000520199 ATP6V0A2Q9Y487 856 aa20.23■□□□□ 0.83
CLK4-205ENST00000520199 SH3TC1Q8TE82 1336 aa20.23■□□□□ 0.83
CLK4-205ENST00000520199 CACNA1FO60840 1977 aa20.23■□□□□ 0.83
CLK4-205ENST00000520199 CC2D2BQ6DHV5 1058 aa20.22■□□□□ 0.83
CLK4-205ENST00000520199 TAF1DQ9H5J8 278 aaPredicted RBP20.22■□□□□ 0.83
CLK4-205ENST00000520199 MRS2Q9HD23 443 aa20.21■□□□□ 0.83
CLK4-205ENST00000520199 RTL5Q5HYW3 569 aaPredicted RBP20.2■□□□□ 0.82
CLK4-205ENST00000520199 RTFDC1Q9BY42 306 aaPredicted RBP20.2■□□□□ 0.82
CLK4-205ENST00000520199 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
CLK4-205ENST00000520199 G2E3Q7L622 706 aa20.19■□□□□ 0.82
CLK4-205ENST00000520199 SPINK5Q9NQ38 1064 aaPredicted RBP20.19■□□□□ 0.82
CLK4-205ENST00000520199 MYH3P11055 1940 aa20.18■□□□□ 0.82
CLK4-205ENST00000520199 SF3B3Q15393 1217 aaKnown RBP20.18■□□□□ 0.82
CLK4-205ENST00000520199 SP8Q8IXZ3 490 aa20.18■□□□□ 0.82
CLK4-205ENST00000520199 JARID2Q92833 1246 aaPredicted RBP20.18■□□□□ 0.82
CLK4-205ENST00000520199 CELF1Q92879 486 aaKnown RBP20.18■□□□□ 0.82
CLK4-205ENST00000520199 BBOX1O75936 387 aa20.17■□□□□ 0.82
CLK4-205ENST00000520199 GRAPQ13588 217 aa20.17■□□□□ 0.82
CLK4-205ENST00000520199 AOC3Q16853 763 aa20.17■□□□□ 0.82
CLK4-205ENST00000520199 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
CLK4-205ENST00000520199 GRAPLQ8TC17 118 aaPredicted RBP20.17■□□□□ 0.82
CLK4-205ENST00000520199 KLRG1Q96E93 195 aa20.17■□□□□ 0.82
CLK4-205ENST00000520199 SCN9AQ15858 1988 aa20.17■□□□□ 0.82
CLK4-205ENST00000520199 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
CLK4-205ENST00000520199 CHADLQ6NUI6 762 aa20.16■□□□□ 0.82
CLK4-205ENST00000520199 GPC2Q8N158 579 aa20.16■□□□□ 0.82
CLK4-205ENST00000520199 MYD88Q99836 296 aa20.16■□□□□ 0.82
CLK4-205ENST00000520199 ANP32CO43423 234 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms