RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 KLRG1Q96E93 195 aa16.29■□□□□ 0.2
CSMD1-205ENST00000519623 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
CSMD1-205ENST00000519623 PARP10Q53GL7 1025 aa16.28■□□□□ 0.2
CSMD1-205ENST00000519623 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
CSMD1-205ENST00000519623 C3orf67Q6ZVT6 689 aa16.28■□□□□ 0.2
CSMD1-205ENST00000519623 PPP1R42Q7Z4L9 355 aa16.28■□□□□ 0.2
CSMD1-205ENST00000519623 CC2D2BQ6DHV5 1058 aa16.27■□□□□ 0.2
CSMD1-205ENST00000519623 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.2
CSMD1-205ENST00000519623 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.2
CSMD1-205ENST00000519623 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
CSMD1-205ENST00000519623 CRAMP1Q96RY5 1269 aa16.27■□□□□ 0.2
CSMD1-205ENST00000519623 DDX21Q9NR30 783 aaKnown RBP eCLIP16.27■□□□□ 0.2
CSMD1-205ENST00000519623 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.2
CSMD1-205ENST00000519623 POTEIP0CG38 1075 aa16.26■□□□□ 0.19
CSMD1-205ENST00000519623 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
CSMD1-205ENST00000519623 IARSP41252 1262 aaKnown RBP16.26■□□□□ 0.19
CSMD1-205ENST00000519623 AIMP1Q12904 312 aaKnown RBP16.26■□□□□ 0.19
CSMD1-205ENST00000519623 JMYQ8N9B5 988 aa16.26■□□□□ 0.19
CSMD1-205ENST00000519623 RBM17Q96I25 401 aaKnown RBP16.26■□□□□ 0.19
CSMD1-205ENST00000519623 PSMD1Q99460 953 aa16.26■□□□□ 0.19
CSMD1-205ENST00000519623 UTP14AQ9BVJ6 771 aaKnown RBP16.26■□□□□ 0.19
CSMD1-205ENST00000519623 ZNF541Q9H0D2 1346 aa16.25■□□□□ 0.19
CSMD1-205ENST00000519623 FZD9O00144 591 aa16.25■□□□□ 0.19
CSMD1-205ENST00000519623 TCIRG1Q13488 830 aa16.25■□□□□ 0.19
CSMD1-205ENST00000519623 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
CSMD1-205ENST00000519623 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
CSMD1-205ENST00000519623 IFFO2Q5TF58 517 aa16.24■□□□□ 0.19
CSMD1-205ENST00000519623 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
CSMD1-205ENST00000519623 SLC51AQ86UW1 340 aa16.24■□□□□ 0.19
CSMD1-205ENST00000519623 NLRP10Q86W26 655 aa16.24■□□□□ 0.19
CSMD1-205ENST00000519623 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
CSMD1-205ENST00000519623 CHPF2Q9P2E5 772 aa16.24■□□□□ 0.19
CSMD1-205ENST00000519623 SCN4AP35499 1836 aa16.24■□□□□ 0.19
CSMD1-205ENST00000519623 IQCA1LA6NCM1 817 aa16.23■□□□□ 0.19
CSMD1-205ENST00000519623 HOXB7P09629 217 aa16.23■□□□□ 0.19
CSMD1-205ENST00000519623 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
CSMD1-205ENST00000519623 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
CSMD1-205ENST00000519623 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
CSMD1-205ENST00000519623 APAF1O14727 1248 aa16.22■□□□□ 0.19
CSMD1-205ENST00000519623 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
CSMD1-205ENST00000519623 HDGFL1Q5TGJ6 251 aa16.22■□□□□ 0.19
CSMD1-205ENST00000519623 RNF123Q5XPI4 1314 aa16.21■□□□□ 0.19
CSMD1-205ENST00000519623 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.19
CSMD1-205ENST00000519623 PPEF1O14829 653 aaPredicted RBP16.21■□□□□ 0.19
CSMD1-205ENST00000519623 HCLS1P14317 486 aaPredicted RBP16.21■□□□□ 0.19
CSMD1-205ENST00000519623 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
CSMD1-205ENST00000519623 ANKRD13DQ6ZTN6 518 aa16.21■□□□□ 0.19
CSMD1-205ENST00000519623 JDP2Q8WYK2 163 aa16.21■□□□□ 0.19
CSMD1-205ENST00000519623 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
CSMD1-205ENST00000519623 COL4A5P29400 1685 aa16.21■□□□□ 0.18
CSMD1-205ENST00000519623 LDHDQ86WU2 507 aa16.2■□□□□ 0.18
CSMD1-205ENST00000519623 GPC2Q8N158 579 aa16.2■□□□□ 0.18
CSMD1-205ENST00000519623 PLBD2Q8NHP8 589 aa16.2■□□□□ 0.18
CSMD1-205ENST00000519623 DBF4Q9UBU7 674 aaPredicted RBP16.2■□□□□ 0.18
CSMD1-205ENST00000519623 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
CSMD1-205ENST00000519623 HACL1Q9UJ83 578 aa16.2■□□□□ 0.18
CSMD1-205ENST00000519623 ATP6V0A2Q9Y487 856 aa16.2■□□□□ 0.18
CSMD1-205ENST00000519623 ABCC4O15439 1325 aa16.19■□□□□ 0.18
CSMD1-205ENST00000519623 BBOX1O75936 387 aa16.19■□□□□ 0.18
CSMD1-205ENST00000519623 ISCA1Q9BUE6 129 aa16.19■□□□□ 0.18
CSMD1-205ENST00000519623 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
CSMD1-205ENST00000519623 LAMB2P55268 1798 aa16.18■□□□□ 0.18
CSMD1-205ENST00000519623 PCNTO95613 3336 aa16.18■□□□□ 0.18
CSMD1-205ENST00000519623 ITGBL1O95965 494 aaPredicted RBP16.18■□□□□ 0.18
CSMD1-205ENST00000519623 EPHX2P34913 555 aa16.18■□□□□ 0.18
CSMD1-205ENST00000519623 LARGE2Q8N3Y3 721 aa16.18■□□□□ 0.18
CSMD1-205ENST00000519623 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
CSMD1-205ENST00000519623 HYPKQ9NX55 129 aa16.18■□□□□ 0.18
CSMD1-205ENST00000519623 PASKQ96RG2 1323 aa16.18■□□□□ 0.18
CSMD1-205ENST00000519623 EIF6P56537 245 aaKnown RBP16.17■□□□□ 0.18
CSMD1-205ENST00000519623 CCDC184Q52MB2 194 aa16.17■□□□□ 0.18
CSMD1-205ENST00000519623 SP8Q8IXZ3 490 aa16.17■□□□□ 0.18
CSMD1-205ENST00000519623 ZNF428Q96B54 188 aa16.17■□□□□ 0.18
CSMD1-205ENST00000519623 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
CSMD1-205ENST00000519623 CREBZFQ9NS37 354 aa16.17■□□□□ 0.18
CSMD1-205ENST00000519623 ATP5J2-PTCD1G3V325 749 aa16.16■□□□□ 0.18
CSMD1-205ENST00000519623 GNAI1P63096 354 aa16.16■□□□□ 0.18
CSMD1-205ENST00000519623 TRIM28Q13263 835 aaKnown RBP16.16■□□□□ 0.18
CSMD1-205ENST00000519623 EAPPQ56P03 285 aaPredicted RBP16.16■□□□□ 0.18
CSMD1-205ENST00000519623 PNMA8AQ86V59 439 aaPredicted RBP16.16■□□□□ 0.18
CSMD1-205ENST00000519623 VPS33BQ9H267 617 aa16.16■□□□□ 0.18
CSMD1-205ENST00000519623 GJA3Q9Y6H8 435 aa16.16■□□□□ 0.18
CSMD1-205ENST00000519623 TAF1P21675 1872 aa16.16■□□□□ 0.18
CSMD1-205ENST00000519623 ELL2O00472 640 aaPredicted RBP16.15■□□□□ 0.18
CSMD1-205ENST00000519623 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
CSMD1-205ENST00000519623 DDX46Q7L014 1031 aaKnown RBP16.15■□□□□ 0.18
CSMD1-205ENST00000519623 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
CSMD1-205ENST00000519623 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
CSMD1-205ENST00000519623 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
CSMD1-205ENST00000519623 ADAMTSL1Q8N6G6 1762 aa16.15■□□□□ 0.18
CSMD1-205ENST00000519623 PPIP5K2O43314 1243 aa16.14■□□□□ 0.17
CSMD1-205ENST00000519623 GRAPQ13588 217 aa16.14■□□□□ 0.17
CSMD1-205ENST00000519623 AOC3Q16853 763 aa16.14■□□□□ 0.17
CSMD1-205ENST00000519623 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.17
CSMD1-205ENST00000519623 GRAPLQ8TC17 118 aaPredicted RBP16.14■□□□□ 0.17
CSMD1-205ENST00000519623 PHAXQ9H814 394 aaKnown RBP16.14■□□□□ 0.17
CSMD1-205ENST00000519623 EPS15P42566 896 aa16.13■□□□□ 0.17
CSMD1-205ENST00000519623 SCNN1DP51172 638 aa16.13■□□□□ 0.17
CSMD1-205ENST00000519623 SF3B3Q15393 1217 aaKnown RBP16.13■□□□□ 0.17
CSMD1-205ENST00000519623 DPP8Q6V1X1 898 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms