RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 CNKSR1Q969H4 720 aa9.21□□□□□ -0.94
SLIT3-205ENST00000519486 PI4KAP2A4QPH2 592 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 C6orf229H3BNL8 230 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 PI4KAP1Q8N8J0 262 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 GNL3LQ9NVN8 582 aaKnown RBP9.2□□□□□ -0.94
SLIT3-205ENST00000519486 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
SLIT3-205ENST00000519486 GIGYF1O75420 1035 aaPredicted RBP9.2□□□□□ -0.94
SLIT3-205ENST00000519486 IGHMBP2P38935 993 aaKnown RBP9.2□□□□□ -0.94
SLIT3-205ENST00000519486 RBM5P52756 815 aaKnown RBP eCLIP9.2□□□□□ -0.94
SLIT3-205ENST00000519486 GPS2Q13227 327 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 MSL1Q68DK7 614 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 AACSQ86V21 672 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 CNBD1Q8NA66 436 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 FAM184AQ8NB25 1140 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 NEUROD6Q96NK8 337 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 EYA3Q99504 573 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 ANTXR1Q9H6X2 564 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 HDAC9Q9UKV0 1011 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.2□□□□□ -0.94
SLIT3-205ENST00000519486 EDC4Q6P2E9 1401 aaKnown RBP9.2□□□□□ -0.94
SLIT3-205ENST00000519486 MYO1BO43795 1136 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 KIF1BPQ96EK5 621 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 USP26Q9BXU7 913 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 LAMC1P11047 1609 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 KLHL40Q2TBA0 621 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 NLRP3Q96P20 1036 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 PPP1R9BQ96SB3 815 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 MTFR1LQ9H019 292 aa9.2□□□□□ -0.94
SLIT3-205ENST00000519486 OGFOD1Q8N543 542 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 ZNF592Q92610 1267 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 TMX3Q96JJ7 454 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 OVOS2A0A0G2JMS6 1433 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 OVOS2A0A0J9YW53 1432 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 OVOS2Q6IE36 1432 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 GSPT1P15170 499 aaKnown RBP9.19□□□□□ -0.94
SLIT3-205ENST00000519486 BARGINQ6ZT62 677 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 SIRT2Q8IXJ6 389 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 DNAAF4Q8WXU2 420 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 JAKMIP1Q96N16 626 aaKnown RBP9.19□□□□□ -0.94
SLIT3-205ENST00000519486 TSPY26PQ9H489 355 aa9.19□□□□□ -0.94
SLIT3-205ENST00000519486 WDR33Q9C0J8 1336 aaKnown RBP9.19□□□□□ -0.94
SLIT3-205ENST00000519486 ZNF500O60304 480 aaPredicted RBP9.19□□□□□ -0.94
SLIT3-205ENST00000519486 UPF1Q92900 1129 aaKnown RBP eCLIP9.19□□□□□ -0.94
SLIT3-205ENST00000519486 CD2BP2O95400 341 aaKnown RBP9.18□□□□□ -0.94
SLIT3-205ENST00000519486 CASTP20810 708 aaKnown RBP9.18□□□□□ -0.94
SLIT3-205ENST00000519486 STK3Q13188 491 aa9.18□□□□□ -0.94
SLIT3-205ENST00000519486 ABCC4O15439 1325 aa9.18□□□□□ -0.94
SLIT3-205ENST00000519486 NRDCO43847 1150 aa9.18□□□□□ -0.94
SLIT3-205ENST00000519486 LRRFIP1Q32MZ4 808 aaKnown RBP9.18□□□□□ -0.94
SLIT3-205ENST00000519486 NOM1Q5C9Z4 860 aaKnown RBP9.18□□□□□ -0.94
SLIT3-205ENST00000519486 MYRIPQ8NFW9 859 aa9.18□□□□□ -0.94
SLIT3-205ENST00000519486 BICD2Q8TD16 824 aa9.18□□□□□ -0.94
SLIT3-205ENST00000519486 TPM3P06753 285 aa9.18□□□□□ -0.94
SLIT3-205ENST00000519486 SNRPA1P09661 255 aaKnown RBP9.18□□□□□ -0.94
SLIT3-205ENST00000519486 DALRD3Q5D0E6 543 aaKnown RBP9.18□□□□□ -0.94
SLIT3-205ENST00000519486 PHAXQ9H814 394 aaKnown RBP9.18□□□□□ -0.94
SLIT3-205ENST00000519486 CYP46A1Q9Y6A2 500 aa9.18□□□□□ -0.94
SLIT3-205ENST00000519486 LRRC7Q96NW7 1537 aa9.18□□□□□ -0.94
SLIT3-205ENST00000519486 MYO3AQ8NEV4 1616 aa9.18□□□□□ -0.94
SLIT3-205ENST00000519486 HOXC9P31274 260 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 GNL2Q13823 731 aaKnown RBP9.17□□□□□ -0.94
SLIT3-205ENST00000519486 FNBP4Q8N3X1 1017 aaPredicted RBP9.17□□□□□ -0.94
SLIT3-205ENST00000519486 ESYT1Q9BSJ8 1104 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 CWC15Q9P013 229 aaKnown RBP9.17□□□□□ -0.94
SLIT3-205ENST00000519486 ATP8B2P98198 1209 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 PRPF40BQ6NWY9 871 aaKnown RBP9.17□□□□□ -0.94
SLIT3-205ENST00000519486 FERMT3Q86UX7 667 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 CCDC8Q9H0W5 538 aaPredicted RBP9.17□□□□□ -0.94
SLIT3-205ENST00000519486 CHPF2Q9P2E5 772 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 ANKIB1Q9P2G1 1089 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 EAPPQ56P03 285 aaPredicted RBP9.17□□□□□ -0.94
SLIT3-205ENST00000519486 AKAP4Q5JQC9 854 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 GAS2L3Q86XJ1 694 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 CCDC83Q8IWF9 413 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 RHPN1Q8TCX5 695 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 FEZ1Q99689 392 aa9.17□□□□□ -0.94
SLIT3-205ENST00000519486 ZC3H13Q5T200 1668 aaKnown RBP9.17□□□□□ -0.94
SLIT3-205ENST00000519486 GLRX3O76003 335 aaKnown RBP9.16□□□□□ -0.94
SLIT3-205ENST00000519486 BOLA2Q9H3K6 86 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 PNMA6EA0A0J9YXQ4 647 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 RAB11FIP3O75154 756 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 ALDH1B1P30837 517 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 ERC1Q8IUD2 1116 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 CDC5LQ99459 802 aaKnown RBP9.16□□□□□ -0.94
SLIT3-205ENST00000519486 BRD2P25440 801 aaKnown RBP9.16□□□□□ -0.94
SLIT3-205ENST00000519486 SF3A1Q15459 793 aaKnown RBP9.16□□□□□ -0.94
SLIT3-205ENST00000519486 EZH2Q15910 746 aaKnown RBP9.16□□□□□ -0.94
SLIT3-205ENST00000519486 ARHGEF25Q86VW2 580 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 TRMT112Q9UI30 125 aaKnown RBP9.16□□□□□ -0.94
SLIT3-205ENST00000519486 GJA3Q9Y6H8 435 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 SPATA31A5Q5VU36 1347 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 SPATA31A7Q8IWB4 1347 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 INO80Q9ULG1 1556 aaPredicted RBP9.16□□□□□ -0.94
SLIT3-205ENST00000519486 ZSCAN23Q3MJ62 389 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 LARP1BQ659C4 914 aaKnown RBP9.16□□□□□ -0.94
SLIT3-205ENST00000519486 NIM1KQ8IY84 436 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 PIM2Q9P1W9 311 aa9.16□□□□□ -0.94
SLIT3-205ENST00000519486 PATL2C9JE40 543 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms