RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 FAM161BQ96MY7 647 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 PHACTR1Q9C0D0 580 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 HCN4Q9Y3Q4 1203 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 RAB3GAP2Q9H2M9 1393 aa6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 SUPT6HQ7KZ85 1726 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-212ENST00000518919 PNMA6FA0A0J9YX94 578 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 GTF2E1P29083 439 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 PTGIRP43119 386 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 ZAP70P43403 619 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 CENPCQ03188 943 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 PSMD2Q13200 908 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 C11orf91Q3C1V1 193 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 POTEGQ6S5H5 508 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 KDF1Q8NAX2 398 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 ZSCAN10Q96SZ4 725 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 NIF3L1Q9GZT8 377 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 KLK14Q9P0G3 267 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 VTI1BQ9UEU0 232 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 PARP3Q9Y6F1 533 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 PTPRKQ15262 1439 aa6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 TCOF1Q13428 1488 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-212ENST00000518919 RAPGEF6Q8TEU7 1601 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 SORBS3O60504 671 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 PDGFAP04085 211 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 RELBQ01201 579 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 ENOX2Q16206 610 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 TMEM214Q6NUQ4 689 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 TMC4Q7Z404 712 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 ZNF295-AS1Q8N0V1 137 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 IFT43Q96FT9 208 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 AGBL1Q96MI9 1066 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 NIFKQ9BYG3 293 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 WWC3Q9ULE0 1092 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 CLSPNQ9HAW4 1339 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 SETD5Q9C0A6 1442 aa6.91□□□□□ -1.3
CTNNA1-212ENST00000518919 ZIC2O95409 532 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 PCSK2P16519 638 aa6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 DAB2P98082 770 aa6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 HDLBPQ00341 1268 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 FAM50AQ14320 339 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 NAALADL2Q58DX5 795 aa6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 ALG1LQ6GMV1 187 aa6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 Q6ZVU0 165 aa6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 TMEM87AQ8NBN3 555 aa6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 ITPKCQ96DU7 683 aa6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 SETDB2Q96T68 719 aa6.9□□□□□ -1.3
CTNNA1-212ENST00000518919 PTPN23Q9H3S7 1636 aa6.9□□□□□ -1.31
CTNNA1-212ENST00000518919 WDR4P57081 412 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 FOXC1Q12948 553 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 GNASQ5JWF2 1037 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 ZNF697Q5TEC3 545 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 TREML1Q86YW5 311 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 TTC16Q8NEE8 873 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 RHBDD1Q8TEB9 315 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 DRC1Q96MC2 740 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 RNF19AQ9NV58 838 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 PLB1Q6P1J6 1458 aa6.89□□□□□ -1.31
CTNNA1-212ENST00000518919 PLA2G4AP47712 749 aa6.88□□□□□ -1.31
CTNNA1-212ENST00000518919 SF3A1Q15459 793 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-212ENST00000518919 C1orf53Q5VUE5 145 aa6.88□□□□□ -1.31
CTNNA1-212ENST00000518919 C9orf131Q5VYM1 1079 aa6.88□□□□□ -1.31
CTNNA1-212ENST00000518919 SPRYD7Q5W111 196 aa6.88□□□□□ -1.31
CTNNA1-212ENST00000518919 GPR152Q8TDT2 470 aa6.88□□□□□ -1.31
CTNNA1-212ENST00000518919 ZNF395Q9H8N7 513 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-212ENST00000518919 FAM13BQ9NYF5 915 aa6.88□□□□□ -1.31
CTNNA1-212ENST00000518919 ABCA8O94911 1581 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 HFM1A2PYH4 1435 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 GNA15P30679 374 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 TXLNAP40222 546 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 HIF1AQ16665 826 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 C8orf34Q49A92 452 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 SLC27A3Q5K4L6 730 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 LDLRAD1Q5T700 205 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 RHPN1Q8TCX5 695 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 FBF1Q8TES7 1133 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 NUDT16Q96DE0 195 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 CSRNP1Q96S65 589 aa6.87□□□□□ -1.31
CTNNA1-212ENST00000518919 CARMIL2Q6F5E8 1435 aa6.86□□□□□ -1.31
CTNNA1-212ENST00000518919 MIA2Q96PC5 1412 aa6.86□□□□□ -1.31
CTNNA1-212ENST00000518919 TIMP2P16035 220 aa6.86□□□□□ -1.31
CTNNA1-212ENST00000518919 ORC1Q13415 861 aa6.86□□□□□ -1.31
CTNNA1-212ENST00000518919 NBPF1Q3BBV0 1214 aa6.86□□□□□ -1.31
CTNNA1-212ENST00000518919 NT5DC4Q86YG4 428 aa6.86□□□□□ -1.31
CTNNA1-212ENST00000518919 SNIP1Q8TAD8 396 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-212ENST00000518919 METTL5Q9NRN9 209 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-212ENST00000518919 CHD1O14646 1710 aa6.86□□□□□ -1.31
CTNNA1-212ENST00000518919 TROQ12816 1431 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 NAIPQ13075 1403 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 AKNAQ7Z591 1439 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 TTC24A2A3L6 582 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 TGFBR3LH3BV60 316 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 EIF1AYO14602 144 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 RPLP1P05386 114 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 NEFLP07196 543 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 GPC1P35052 558 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 ZNF76P36508 570 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 FANCCQ00597 558 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 ZNF598Q86UK7 904 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 MEIOBQ8N635 442 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms