RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 SENP3-EIF4A1A0A087X0R7 540 aa17.08■□□□□ 0.32
TMEM55A-203ENST00000518869 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
TMEM55A-203ENST00000518869 RASSF7Q02833 373 aa17.08■□□□□ 0.32
TMEM55A-203ENST00000518869 GOLGA2Q08379 1002 aa17.08■□□□□ 0.32
TMEM55A-203ENST00000518869 CCDC184Q52MB2 194 aa17.08■□□□□ 0.32
TMEM55A-203ENST00000518869 WWC1Q8IX03 1113 aa17.08■□□□□ 0.32
TMEM55A-203ENST00000518869 TRMT112Q9UI30 125 aaKnown RBP17.08■□□□□ 0.32
TMEM55A-203ENST00000518869 RIC1Q4ADV7 1423 aa17.07■□□□□ 0.32
TMEM55A-203ENST00000518869 UBN2Q6ZU65 1347 aa17.07■□□□□ 0.32
TMEM55A-203ENST00000518869 GLTPD2A6NH11 291 aa17.07■□□□□ 0.32
TMEM55A-203ENST00000518869 NFKBIEO00221 500 aa17.07■□□□□ 0.32
TMEM55A-203ENST00000518869 NTSR2O95665 410 aa17.07■□□□□ 0.32
TMEM55A-203ENST00000518869 HOXA10P31260 410 aaPredicted RBP17.07■□□□□ 0.32
TMEM55A-203ENST00000518869 RIC3Q7Z5B4 369 aa17.07■□□□□ 0.32
TMEM55A-203ENST00000518869 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
TMEM55A-203ENST00000518869 STK31Q9BXU1 1019 aa17.07■□□□□ 0.32
TMEM55A-203ENST00000518869 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
TMEM55A-203ENST00000518869 ELL2O00472 640 aaPredicted RBP17.06■□□□□ 0.32
TMEM55A-203ENST00000518869 KIF3CO14782 793 aa17.06■□□□□ 0.32
TMEM55A-203ENST00000518869 NLRP10Q86W26 655 aa17.06■□□□□ 0.32
TMEM55A-203ENST00000518869 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
TMEM55A-203ENST00000518869 ANKRD31Q8N7Z5 1873 aa17.05■□□□□ 0.32
TMEM55A-203ENST00000518869 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
TMEM55A-203ENST00000518869 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
TMEM55A-203ENST00000518869 C7orf43Q8WVR3 580 aa17.05■□□□□ 0.32
TMEM55A-203ENST00000518869 BBOX1O75936 387 aa17.04■□□□□ 0.32
TMEM55A-203ENST00000518869 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
TMEM55A-203ENST00000518869 NMRK2Q9NPI5 230 aa17.04■□□□□ 0.32
TMEM55A-203ENST00000518869 NUP98P52948 1817 aa17.04■□□□□ 0.32
TMEM55A-203ENST00000518869 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
TMEM55A-203ENST00000518869 FAM9BQ8IZU0 186 aa17.03■□□□□ 0.32
TMEM55A-203ENST00000518869 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
TMEM55A-203ENST00000518869 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
TMEM55A-203ENST00000518869 RRAGCQ9HB90 399 aa17.03■□□□□ 0.32
TMEM55A-203ENST00000518869 FSTL1Q12841 308 aa17.02■□□□□ 0.32
TMEM55A-203ENST00000518869 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
TMEM55A-203ENST00000518869 JDP2Q8WYK2 163 aa17.02■□□□□ 0.32
TMEM55A-203ENST00000518869 PSMD1Q99460 953 aa17.02■□□□□ 0.32
TMEM55A-203ENST00000518869 ABCC12Q96J65 1359 aa17.02■□□□□ 0.31
TMEM55A-203ENST00000518869 PPEF1O14829 653 aaPredicted RBP17.01■□□□□ 0.31
TMEM55A-203ENST00000518869 HSPA6P17066 643 aa17.01■□□□□ 0.31
TMEM55A-203ENST00000518869 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
TMEM55A-203ENST00000518869 SUPT20HQ8NEM7 779 aa17.01■□□□□ 0.31
TMEM55A-203ENST00000518869 ISCA1Q9BUE6 129 aa17.01■□□□□ 0.31
TMEM55A-203ENST00000518869 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
TMEM55A-203ENST00000518869 NEXNQ0ZGT2 675 aa17■□□□□ 0.31
TMEM55A-203ENST00000518869 SYNE4Q8N205 404 aa17■□□□□ 0.31
TMEM55A-203ENST00000518869 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
TMEM55A-203ENST00000518869 COL11A2P13942 1736 aaPredicted RBP16.99■□□□□ 0.31
TMEM55A-203ENST00000518869 IQCA1LA6NCM1 817 aa16.99■□□□□ 0.31
TMEM55A-203ENST00000518869 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
TMEM55A-203ENST00000518869 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
TMEM55A-203ENST00000518869 CCDC191Q8NCU4 936 aa16.99■□□□□ 0.31
TMEM55A-203ENST00000518869 SMC1BQ8NDV3 1235 aa16.99■□□□□ 0.31
TMEM55A-203ENST00000518869 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
TMEM55A-203ENST00000518869 ATP6V0A2Q9Y487 856 aa16.99■□□□□ 0.31
TMEM55A-203ENST00000518869 SBF1O95248 1867 aa16.99■□□□□ 0.31
TMEM55A-203ENST00000518869 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
TMEM55A-203ENST00000518869 HCLS1P14317 486 aaPredicted RBP16.98■□□□□ 0.31
TMEM55A-203ENST00000518869 APLP1P51693 650 aa16.98■□□□□ 0.31
TMEM55A-203ENST00000518869 PRELPP51888 382 aa16.98■□□□□ 0.31
TMEM55A-203ENST00000518869 ZBTB38Q8NAP3 1195 aaPredicted RBP16.98■□□□□ 0.31
TMEM55A-203ENST00000518869 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
TMEM55A-203ENST00000518869 ZNF277Q9NRM2 450 aaPredicted RBP16.98■□□□□ 0.31
TMEM55A-203ENST00000518869 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
TMEM55A-203ENST00000518869 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
TMEM55A-203ENST00000518869 SP8Q8IXZ3 490 aa16.97■□□□□ 0.31
TMEM55A-203ENST00000518869 TSPYL6Q8N831 410 aa16.97■□□□□ 0.31
TMEM55A-203ENST00000518869 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
TMEM55A-203ENST00000518869 CWC25Q9NXE8 425 aaPredicted RBP16.97■□□□□ 0.31
TMEM55A-203ENST00000518869 ARFGEF2Q9Y6D5 1785 aa16.97■□□□□ 0.31
TMEM55A-203ENST00000518869 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
TMEM55A-203ENST00000518869 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
TMEM55A-203ENST00000518869 GRAPQ13588 217 aa16.96■□□□□ 0.31
TMEM55A-203ENST00000518869 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
TMEM55A-203ENST00000518869 GRAPLQ8TC17 118 aaPredicted RBP16.96■□□□□ 0.31
TMEM55A-203ENST00000518869 FAM89AQ96GI7 184 aa16.96■□□□□ 0.31
TMEM55A-203ENST00000518869 MYD88Q99836 296 aa16.96■□□□□ 0.31
TMEM55A-203ENST00000518869 FER1L6Q2WGJ9 1857 aa16.96■□□□□ 0.31
TMEM55A-203ENST00000518869 IRS4O14654 1257 aaPredicted RBP16.95■□□□□ 0.3
TMEM55A-203ENST00000518869 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
TMEM55A-203ENST00000518869 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
TMEM55A-203ENST00000518869 ABCC4O15439 1325 aa16.95■□□□□ 0.3
TMEM55A-203ENST00000518869 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
TMEM55A-203ENST00000518869 PCCAP05165 728 aaPredicted RBP16.94■□□□□ 0.3
TMEM55A-203ENST00000518869 DPP8Q6V1X1 898 aaPredicted RBP16.94■□□□□ 0.3
TMEM55A-203ENST00000518869 MPNDQ8N594 471 aa16.94■□□□□ 0.3
TMEM55A-203ENST00000518869 MAP3K2Q9Y2U5 619 aa16.94■□□□□ 0.3
TMEM55A-203ENST00000518869 PI4KAP2A4QPH2 592 aa16.93■□□□□ 0.3
TMEM55A-203ENST00000518869 FZD9O00144 591 aa16.93■□□□□ 0.3
TMEM55A-203ENST00000518869 DDNO94850 711 aaPredicted RBP16.93■□□□□ 0.3
TMEM55A-203ENST00000518869 OLFM4Q6UX06 510 aa16.93■□□□□ 0.3
TMEM55A-203ENST00000518869 C3orf67Q6ZVT6 689 aa16.93■□□□□ 0.3
TMEM55A-203ENST00000518869 NIM1KQ8IY84 436 aa16.93■□□□□ 0.3
TMEM55A-203ENST00000518869 PI4KAP1Q8N8J0 262 aa16.93■□□□□ 0.3
TMEM55A-203ENST00000518869 TNRC6CQ9HCJ0 1690 aaKnown RBP16.93■□□□□ 0.3
TMEM55A-203ENST00000518869 CCDC152Q4G0S7 254 aa16.92■□□□□ 0.3
TMEM55A-203ENST00000518869 GPC2Q8N158 579 aa16.92■□□□□ 0.3
TMEM55A-203ENST00000518869 L3MBTL3Q96JM7 780 aaPredicted RBP16.92■□□□□ 0.3
TMEM55A-203ENST00000518869 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms