RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 VPS37CA5D8V6 355 aaPredicted RBP12.04□□□□□ -0.48
MTCL1-207ENST00000518815 SMC3Q9UQE7 1217 aa12.04□□□□□ -0.48
MTCL1-207ENST00000518815 LRRFIP1Q32MZ4 808 aaKnown RBP12.03□□□□□ -0.48
MTCL1-207ENST00000518815 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
MTCL1-207ENST00000518815 GRM8O00222 908 aa12.03□□□□□ -0.48
MTCL1-207ENST00000518815 FOSBP53539 338 aa12.03□□□□□ -0.48
MTCL1-207ENST00000518815 COL16A1Q07092 1604 aaPredicted RBP12.03□□□□□ -0.48
MTCL1-207ENST00000518815 PARP4Q9UKK3 1724 aaKnown RBP12.03□□□□□ -0.48
MTCL1-207ENST00000518815 CACNA1FO60840 1977 aa12.03□□□□□ -0.48
MTCL1-207ENST00000518815 GIGYF1O75420 1035 aaPredicted RBP12.03□□□□□ -0.48
MTCL1-207ENST00000518815 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
MTCL1-207ENST00000518815 AACSQ86V21 672 aa12.03□□□□□ -0.48
MTCL1-207ENST00000518815 MTX1Q13505 466 aa12.03□□□□□ -0.48
MTCL1-207ENST00000518815 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.48
MTCL1-207ENST00000518815 PKD1L3Q7Z443 1732 aa12.02□□□□□ -0.49
MTCL1-207ENST00000518815 ADAMTS7Q9UKP4 1686 aa12.02□□□□□ -0.49
MTCL1-207ENST00000518815 SALL3Q9BXA9 1300 aa12.02□□□□□ -0.49
MTCL1-207ENST00000518815 SGSM2O43147 1006 aa12.02□□□□□ -0.49
MTCL1-207ENST00000518815 HSPA4P34932 840 aa12.02□□□□□ -0.49
MTCL1-207ENST00000518815 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.49
MTCL1-207ENST00000518815 RAD50Q92878 1312 aa12.02□□□□□ -0.49
MTCL1-207ENST00000518815 NBPF7P0C2Y1 421 aaPredicted RBP12.02□□□□□ -0.49
MTCL1-207ENST00000518815 SH2B1Q9NRF2 756 aaPredicted RBP12.02□□□□□ -0.49
MTCL1-207ENST00000518815 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
MTCL1-207ENST00000518815 ANKRD1Q15327 319 aa12.01□□□□□ -0.49
MTCL1-207ENST00000518815 CWC27Q6UX04 472 aaKnown RBP12.01□□□□□ -0.49
MTCL1-207ENST00000518815 ZMYND15Q9H091 742 aa12.01□□□□□ -0.49
MTCL1-207ENST00000518815 LETM1O95202 739 aaPredicted RBP12.01□□□□□ -0.49
MTCL1-207ENST00000518815 CUL4AQ13619 759 aa12.01□□□□□ -0.49
MTCL1-207ENST00000518815 CHMP4CQ96CF2 233 aa12.01□□□□□ -0.49
MTCL1-207ENST00000518815 CARD10Q9BWT7 1032 aa12.01□□□□□ -0.49
MTCL1-207ENST00000518815 KIF3AQ9Y496 699 aa12.01□□□□□ -0.49
MTCL1-207ENST00000518815 ZNF445P59923 1031 aa12.01□□□□□ -0.49
MTCL1-207ENST00000518815 FMNL2Q96PY5 1086 aa12.01□□□□□ -0.49
MTCL1-207ENST00000518815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
MTCL1-207ENST00000518815 SNRPA1P09661 255 aaKnown RBP12□□□□□ -0.49
MTCL1-207ENST00000518815 SLC39A6Q13433 755 aa12□□□□□ -0.49
MTCL1-207ENST00000518815 ZGPATQ8N5A5 531 aaKnown RBP12□□□□□ -0.49
MTCL1-207ENST00000518815 MYD88Q99836 296 aa12□□□□□ -0.49
MTCL1-207ENST00000518815 CNNM1Q9NRU3 951 aa12□□□□□ -0.49
MTCL1-207ENST00000518815 TRDNQ13061 729 aa12□□□□□ -0.49
MTCL1-207ENST00000518815 JARID2Q92833 1246 aaPredicted RBP12□□□□□ -0.49
MTCL1-207ENST00000518815 UPF3BQ9BZI7 483 aaKnown RBP12□□□□□ -0.49
MTCL1-207ENST00000518815 CPLX1O14810 134 aa12□□□□□ -0.49
MTCL1-207ENST00000518815 CDK11BP21127 795 aaKnown RBP12□□□□□ -0.49
MTCL1-207ENST00000518815 KIAA2012Q0VF49 1180 aa12□□□□□ -0.49
MTCL1-207ENST00000518815 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
MTCL1-207ENST00000518815 CYP2E1P05181 493 aaPredicted RBP11.99□□□□□ -0.49
MTCL1-207ENST00000518815 PDCP20941 246 aa11.99□□□□□ -0.49
MTCL1-207ENST00000518815 DCAF5Q96JK2 942 aa11.99□□□□□ -0.49
MTCL1-207ENST00000518815 PDRG1Q9NUG6 133 aa11.99□□□□□ -0.49
MTCL1-207ENST00000518815 USP42Q9H9J4 1324 aaKnown RBP11.99□□□□□ -0.49
MTCL1-207ENST00000518815 KCNQ3O43525 872 aa11.99□□□□□ -0.49
MTCL1-207ENST00000518815 CCDC57Q2TAC2 916 aa11.99□□□□□ -0.49
MTCL1-207ENST00000518815 ZNF790Q6PG37 636 aa11.99□□□□□ -0.49
MTCL1-207ENST00000518815 SLC52A2Q9HAB3 445 aa11.99□□□□□ -0.49
MTCL1-207ENST00000518815 LMBRD1Q9NUN5 540 aa11.99□□□□□ -0.49
MTCL1-207ENST00000518815 A0A0U1RQG5 324 aaPredicted RBP11.98□□□□□ -0.49
MTCL1-207ENST00000518815 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
MTCL1-207ENST00000518815 TMOD3Q9NYL9 352 aa11.98□□□□□ -0.49
MTCL1-207ENST00000518815 PIP4K2AP48426 406 aaPredicted RBP11.98□□□□□ -0.49
MTCL1-207ENST00000518815 KRT32Q14532 448 aa11.98□□□□□ -0.49
MTCL1-207ENST00000518815 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
MTCL1-207ENST00000518815 BRD1O95696 1058 aa11.98□□□□□ -0.49
MTCL1-207ENST00000518815 ZSCAN23Q3MJ62 389 aa11.98□□□□□ -0.49
MTCL1-207ENST00000518815 ZBTB3Q9H5J0 574 aa11.98□□□□□ -0.49
MTCL1-207ENST00000518815 KDM3BQ7LBC6 1761 aa11.98□□□□□ -0.49
MTCL1-207ENST00000518815 KDM4AO75164 1064 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 PI4K2BQ8TCG2 481 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 UBAP1LF5GYI3 381 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 CASTP20810 708 aaKnown RBP11.97□□□□□ -0.49
MTCL1-207ENST00000518815 FKBP4Q02790 459 aaKnown RBP eCLIP11.97□□□□□ -0.49
MTCL1-207ENST00000518815 CPLX2Q6PUV4 134 aaKnown RBP11.97□□□□□ -0.49
MTCL1-207ENST00000518815 SYNE3Q6ZMZ3 975 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 RALYLQ86SE5 291 aaKnown RBP11.97□□□□□ -0.49
MTCL1-207ENST00000518815 JAKMIP1Q96N16 626 aaKnown RBP11.97□□□□□ -0.49
MTCL1-207ENST00000518815 TM6SF1Q9BZW5 370 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 SCN11AQ9UI33 1791 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 MEGF6O75095 1541 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 CLCN1P35523 988 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 BICDL1Q6ZP65 573 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 ADCY9O60503 1353 aa11.97□□□□□ -0.49
MTCL1-207ENST00000518815 TSPY26PQ9H489 355 aa11.96□□□□□ -0.49
MTCL1-207ENST00000518815 HMG20BQ9P0W2 317 aa11.96□□□□□ -0.49
MTCL1-207ENST00000518815 GOLGA6L6A8MZA4 724 aa11.96□□□□□ -0.49
MTCL1-207ENST00000518815 VPS53Q5VIR6 699 aa11.96□□□□□ -0.49
MTCL1-207ENST00000518815 NFXL1Q6ZNB6 911 aa11.96□□□□□ -0.49
MTCL1-207ENST00000518815 IL17RAQ96F46 866 aa11.96□□□□□ -0.49
MTCL1-207ENST00000518815 METTL22Q9BUU2 404 aaPredicted RBP11.96□□□□□ -0.49
MTCL1-207ENST00000518815 CEP126Q9P2H0 1117 aa11.96□□□□□ -0.49
MTCL1-207ENST00000518815 SIPA1L3O60292 1781 aaPredicted RBP11.96□□□□□ -0.49
MTCL1-207ENST00000518815 NRDCO43847 1150 aa11.96□□□□□ -0.5
MTCL1-207ENST00000518815 RAD21O60216 631 aa11.96□□□□□ -0.5
MTCL1-207ENST00000518815 CWF19L2Q2TBE0 894 aaKnown RBP11.96□□□□□ -0.5
MTCL1-207ENST00000518815 RASSF8Q8NHQ8 419 aa11.96□□□□□ -0.5
MTCL1-207ENST00000518815 XAGE3Q8WTP9 111 aa11.96□□□□□ -0.5
MTCL1-207ENST00000518815 CCDC8Q9H0W5 538 aaPredicted RBP11.96□□□□□ -0.5
MTCL1-207ENST00000518815 SNX14Q9Y5W7 946 aa11.96□□□□□ -0.5
MTCL1-207ENST00000518815 IL2RBP14784 551 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms