RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 GPTP24298 496 aa11.94□□□□□ -0.5
CLN8-203ENST00000518780 POLD1P28340 1107 aa11.94□□□□□ -0.5
CLN8-203ENST00000518780 TMEM57Q8N5G2 664 aa11.94□□□□□ -0.5
CLN8-203ENST00000518780 C9orf78Q9NZ63 289 aaPredicted RBP11.94□□□□□ -0.5
CLN8-203ENST00000518780 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
CLN8-203ENST00000518780 UBN2Q6ZU65 1347 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 SH3TC1Q8TE82 1336 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 GRM8O00222 908 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 POLRMTO00411 1230 aaKnown RBP11.93□□□□□ -0.5
CLN8-203ENST00000518780 SERPINB2P05120 415 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 MMP10P09238 476 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 RLBP1P12271 317 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 GTF2E1P29083 439 aaPredicted RBP11.93□□□□□ -0.5
CLN8-203ENST00000518780 CWF19L2Q2TBE0 894 aaKnown RBP11.93□□□□□ -0.5
CLN8-203ENST00000518780 SLC10A5Q5PT55 438 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 SUSD4Q5VX71 490 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 NBPF5PQ86XG9 351 aaPredicted RBP11.93□□□□□ -0.5
CLN8-203ENST00000518780 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
CLN8-203ENST00000518780 CDHR2Q9BYE9 1310 aa11.92□□□□□ -0.5
CLN8-203ENST00000518780 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
CLN8-203ENST00000518780 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
CLN8-203ENST00000518780 NTSR2O95665 410 aa11.92□□□□□ -0.5
CLN8-203ENST00000518780 BICDL1Q6ZP65 573 aa11.92□□□□□ -0.5
CLN8-203ENST00000518780 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
CLN8-203ENST00000518780 PDGFDQ9GZP0 370 aaPredicted RBP11.92□□□□□ -0.5
CLN8-203ENST00000518780 USP44Q9H0E7 712 aa11.92□□□□□ -0.5
CLN8-203ENST00000518780 SPON1Q9HCB6 807 aa11.92□□□□□ -0.5
CLN8-203ENST00000518780 PDZRN3Q9UPQ7 1066 aa11.92□□□□□ -0.5
CLN8-203ENST00000518780 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
CLN8-203ENST00000518780 NPHP1O15259 732 aa11.91□□□□□ -0.5
CLN8-203ENST00000518780 NEFLP07196 543 aa11.91□□□□□ -0.5
CLN8-203ENST00000518780 UBTFL1P0CB47 393 aaPredicted RBP11.91□□□□□ -0.5
CLN8-203ENST00000518780 ST5P78524 1137 aa11.91□□□□□ -0.5
CLN8-203ENST00000518780 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
CLN8-203ENST00000518780 TNNQ9UQP3 1299 aa11.91□□□□□ -0.5
CLN8-203ENST00000518780 COG6Q9Y2V7 657 aa11.91□□□□□ -0.5
CLN8-203ENST00000518780 ZBTB7AO95365 584 aa11.9□□□□□ -0.5
CLN8-203ENST00000518780 C4AP0C0L4 1744 aa11.9□□□□□ -0.5
CLN8-203ENST00000518780 DDR1Q08345 913 aa11.9□□□□□ -0.5
CLN8-203ENST00000518780 RIC1Q4ADV7 1423 aa11.9□□□□□ -0.5
CLN8-203ENST00000518780 C20orf194Q5TEA3 1177 aa11.9□□□□□ -0.5
CLN8-203ENST00000518780 ERICH6BQ5W0A0 696 aa11.9□□□□□ -0.5
CLN8-203ENST00000518780 MSL1Q68DK7 614 aa11.9□□□□□ -0.5
CLN8-203ENST00000518780 BRIP1Q9BX63 1249 aa11.9□□□□□ -0.5
CLN8-203ENST00000518780 BCORQ6W2J9 1755 aa11.9□□□□□ -0.51
CLN8-203ENST00000518780 IRS4O14654 1257 aaPredicted RBP11.89□□□□□ -0.51
CLN8-203ENST00000518780 PDE8AO60658 829 aa11.89□□□□□ -0.51
CLN8-203ENST00000518780 GNAI2P04899 355 aa11.89□□□□□ -0.51
CLN8-203ENST00000518780 CASP7P55210 303 aa11.89□□□□□ -0.51
CLN8-203ENST00000518780 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
CLN8-203ENST00000518780 UBE3BQ7Z3V4 1068 aa11.89□□□□□ -0.51
CLN8-203ENST00000518780 FAM89AQ96GI7 184 aa11.89□□□□□ -0.51
CLN8-203ENST00000518780 NLRP3Q96P20 1036 aa11.89□□□□□ -0.51
CLN8-203ENST00000518780 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
CLN8-203ENST00000518780 ZBTB40Q9NUA8 1239 aa11.89□□□□□ -0.51
CLN8-203ENST00000518780 KLRG2A4D1S0 409 aaPredicted RBP11.88□□□□□ -0.51
CLN8-203ENST00000518780 NBPF7P0C2Y1 421 aaPredicted RBP11.88□□□□□ -0.51
CLN8-203ENST00000518780 PDE6BP35913 854 aa11.88□□□□□ -0.51
CLN8-203ENST00000518780 MEIS3Q99687 375 aa11.88□□□□□ -0.51
CLN8-203ENST00000518780 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
CLN8-203ENST00000518780 ARFGEF2Q9Y6D5 1785 aa11.87□□□□□ -0.51
CLN8-203ENST00000518780 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
CLN8-203ENST00000518780 PTGER2P43116 358 aa11.87□□□□□ -0.51
CLN8-203ENST00000518780 SF3B3Q15393 1217 aaKnown RBP11.87□□□□□ -0.51
CLN8-203ENST00000518780 ERFEQ4G0M1 354 aa11.87□□□□□ -0.51
CLN8-203ENST00000518780 RPAP2Q8IXW5 612 aaPredicted RBP11.87□□□□□ -0.51
CLN8-203ENST00000518780 CRBNQ96SW2 442 aa11.87□□□□□ -0.51
CLN8-203ENST00000518780 TUBGCP6Q96RT7 1819 aa11.87□□□□□ -0.51
CLN8-203ENST00000518780 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
CLN8-203ENST00000518780 NUP98P52948 1817 aa11.86□□□□□ -0.51
CLN8-203ENST00000518780 CSF1RP07333 972 aa11.86□□□□□ -0.51
CLN8-203ENST00000518780 TGFB2P61812 414 aa11.86□□□□□ -0.51
CLN8-203ENST00000518780 MTX1Q13505 466 aa11.86□□□□□ -0.51
CLN8-203ENST00000518780 RABL6Q3YEC7 729 aaPredicted RBP11.86□□□□□ -0.51
CLN8-203ENST00000518780 CCDC152Q4G0S7 254 aa11.86□□□□□ -0.51
CLN8-203ENST00000518780 NUTM1Q86Y26 1132 aa11.86□□□□□ -0.51
CLN8-203ENST00000518780 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
CLN8-203ENST00000518780 RTL9Q8NET4 1388 aa11.85□□□□□ -0.51
CLN8-203ENST00000518780 CTSWP56202 376 aa11.85□□□□□ -0.51
CLN8-203ENST00000518780 CRY2Q49AN0 593 aa11.85□□□□□ -0.51
CLN8-203ENST00000518780 SUCLG2Q96I99 432 aa11.85□□□□□ -0.51
CLN8-203ENST00000518780 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
CLN8-203ENST00000518780 HOXA10P31260 410 aaPredicted RBP11.84□□□□□ -0.51
CLN8-203ENST00000518780 FOXO4P98177 505 aa11.84□□□□□ -0.51
CLN8-203ENST00000518780 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
CLN8-203ENST00000518780 TTLL11Q8NHH1 800 aa11.84□□□□□ -0.51
CLN8-203ENST00000518780 KAZALD1Q96I82 304 aa11.84□□□□□ -0.51
CLN8-203ENST00000518780 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
CLN8-203ENST00000518780 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.52
CLN8-203ENST00000518780 ANKRD36CQ5JPF3 1778 aa11.83□□□□□ -0.52
CLN8-203ENST00000518780 H0YIN7 160 aa11.83□□□□□ -0.52
CLN8-203ENST00000518780 HMMRO75330 724 aa11.83□□□□□ -0.52
CLN8-203ENST00000518780 NPR1P16066 1061 aa11.83□□□□□ -0.52
CLN8-203ENST00000518780 ATP8B2P98198 1209 aa11.83□□□□□ -0.52
CLN8-203ENST00000518780 LMBR1LQ6UX01 489 aa11.83□□□□□ -0.52
CLN8-203ENST00000518780 SYNE4Q8N205 404 aa11.83□□□□□ -0.52
CLN8-203ENST00000518780 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
CLN8-203ENST00000518780 BICC1Q9H694 974 aaKnown RBP11.83□□□□□ -0.52
CLN8-203ENST00000518780 C10orf71Q711Q0 1435 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms