RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 OLFM4Q6UX06 510 aa14.04□□□□□ -0.16
FAM3B-206ENST00000518236 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
FAM3B-206ENST00000518236 LTBP3Q9NS15 1303 aa14.04□□□□□ -0.16
FAM3B-206ENST00000518236 SLX4Q8IY92 1834 aa14.04□□□□□ -0.16
FAM3B-206ENST00000518236 PARP10Q53GL7 1025 aa14.03□□□□□ -0.16
FAM3B-206ENST00000518236 HDGFL1Q5TGJ6 251 aa14.03□□□□□ -0.16
FAM3B-206ENST00000518236 ZC3H4Q9UPT8 1303 aaKnown RBP14.03□□□□□ -0.16
FAM3B-206ENST00000518236 NUP98P52948 1817 aa14.02□□□□□ -0.16
FAM3B-206ENST00000518236 RIC1Q4ADV7 1423 aa14.02□□□□□ -0.16
FAM3B-206ENST00000518236 ANP32CO43423 234 aa14.02□□□□□ -0.17
FAM3B-206ENST00000518236 HOXA10P31260 410 aaPredicted RBP14.02□□□□□ -0.17
FAM3B-206ENST00000518236 GNAI1P63096 354 aa14.02□□□□□ -0.17
FAM3B-206ENST00000518236 TCIRG1Q13488 830 aa14.02□□□□□ -0.17
FAM3B-206ENST00000518236 SLC10A5Q5PT55 438 aa14.02□□□□□ -0.17
FAM3B-206ENST00000518236 C8orf58Q8NAV2 365 aa14.02□□□□□ -0.17
FAM3B-206ENST00000518236 TAOK3Q9H2K8 898 aa14.02□□□□□ -0.17
FAM3B-206ENST00000518236 MRS2Q9HD23 443 aa14.02□□□□□ -0.17
FAM3B-206ENST00000518236 DBF4Q9UBU7 674 aaPredicted RBP14.02□□□□□ -0.17
FAM3B-206ENST00000518236 TNRC6CQ9HCJ0 1690 aaKnown RBP14.01□□□□□ -0.17
FAM3B-206ENST00000518236 KDM2BQ8NHM5 1336 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 GLTPD2A6NH11 291 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 ELL2O00472 640 aaPredicted RBP14.01□□□□□ -0.17
FAM3B-206ENST00000518236 TOMM70O94826 608 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 SOGA3Q5TF21 947 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 PPP1R42Q7Z4L9 355 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 NLRP10Q86W26 655 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 SYNE4Q8N205 404 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
FAM3B-206ENST00000518236 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 CACNA1SQ13698 1873 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 TIAM2Q8IVF5 1701 aa14.01□□□□□ -0.17
FAM3B-206ENST00000518236 SNED1Q8TER0 1413 aa14□□□□□ -0.17
FAM3B-206ENST00000518236 POTECB2RU33 542 aa14□□□□□ -0.17
FAM3B-206ENST00000518236 ALDH1B1P30837 517 aa14□□□□□ -0.17
FAM3B-206ENST00000518236 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
FAM3B-206ENST00000518236 CCDC93Q567U6 631 aa14□□□□□ -0.17
FAM3B-206ENST00000518236 HSP90AB3PQ58FF7 597 aa14□□□□□ -0.17
FAM3B-206ENST00000518236 SLC51AQ86UW1 340 aa14□□□□□ -0.17
FAM3B-206ENST00000518236 WWC1Q8IX03 1113 aa14□□□□□ -0.17
FAM3B-206ENST00000518236 PLBD2Q8NHP8 589 aa14□□□□□ -0.17
FAM3B-206ENST00000518236 HSPA6P17066 643 aa13.99□□□□□ -0.17
FAM3B-206ENST00000518236 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
FAM3B-206ENST00000518236 TSPYL6Q8N831 410 aa13.99□□□□□ -0.17
FAM3B-206ENST00000518236 ISCA1Q9BUE6 129 aa13.99□□□□□ -0.17
FAM3B-206ENST00000518236 HYPKQ9NX55 129 aa13.99□□□□□ -0.17
FAM3B-206ENST00000518236 FER1L6Q2WGJ9 1857 aa13.99□□□□□ -0.17
FAM3B-206ENST00000518236 FKBP4Q02790 459 aaKnown RBP eCLIP13.98□□□□□ -0.17
FAM3B-206ENST00000518236 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
FAM3B-206ENST00000518236 TSR2Q969E8 191 aaKnown RBP13.98□□□□□ -0.17
FAM3B-206ENST00000518236 CRAMP1Q96RY5 1269 aa13.98□□□□□ -0.17
FAM3B-206ENST00000518236 PHAXQ9H814 394 aaKnown RBP13.98□□□□□ -0.17
FAM3B-206ENST00000518236 ARFGEF2Q9Y6D5 1785 aa13.97□□□□□ -0.17
FAM3B-206ENST00000518236 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
FAM3B-206ENST00000518236 RTKN2Q8IZC4 609 aa13.97□□□□□ -0.17
FAM3B-206ENST00000518236 RBM46Q8TBY0 533 aaKnown RBP13.97□□□□□ -0.17
FAM3B-206ENST00000518236 RPGRQ92834 1020 aaKnown RBP13.97□□□□□ -0.17
FAM3B-206ENST00000518236 ZNF428Q96B54 188 aa13.97□□□□□ -0.17
FAM3B-206ENST00000518236 NLRP3Q96P20 1036 aa13.97□□□□□ -0.17
FAM3B-206ENST00000518236 ZNF277Q9NRM2 450 aaPredicted RBP13.97□□□□□ -0.17
FAM3B-206ENST00000518236 RNF123Q5XPI4 1314 aa13.96□□□□□ -0.17
FAM3B-206ENST00000518236 WDR90Q96KV7 1748 aa13.96□□□□□ -0.17
FAM3B-206ENST00000518236 DICER1Q9UPY3 1922 aaKnown RBP13.96□□□□□ -0.17
FAM3B-206ENST00000518236 ATP5J2-PTCD1G3V325 749 aa13.96□□□□□ -0.17
FAM3B-206ENST00000518236 HCLS1P14317 486 aaPredicted RBP13.96□□□□□ -0.17
FAM3B-206ENST00000518236 RBM17Q96I25 401 aaKnown RBP13.96□□□□□ -0.17
FAM3B-206ENST00000518236 TRMT112Q9UI30 125 aaKnown RBP13.96□□□□□ -0.17
FAM3B-206ENST00000518236 SH3TC1Q8TE82 1336 aa13.95□□□□□ -0.18
FAM3B-206ENST00000518236 DDNO94850 711 aaPredicted RBP13.95□□□□□ -0.18
FAM3B-206ENST00000518236 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
FAM3B-206ENST00000518236 TRIM28Q13263 835 aaKnown RBP13.95□□□□□ -0.18
FAM3B-206ENST00000518236 IL16Q14005 1332 aa13.94□□□□□ -0.18
FAM3B-206ENST00000518236 CC2D2BQ6DHV5 1058 aa13.94□□□□□ -0.18
FAM3B-206ENST00000518236 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
FAM3B-206ENST00000518236 PSMD1Q99460 953 aa13.94□□□□□ -0.18
FAM3B-206ENST00000518236 ABCC4O15439 1325 aa13.93□□□□□ -0.18
FAM3B-206ENST00000518236 TCERG1O14776 1098 aaKnown RBP13.93□□□□□ -0.18
FAM3B-206ENST00000518236 PPEF1O14829 653 aaPredicted RBP13.93□□□□□ -0.18
FAM3B-206ENST00000518236 IARSP41252 1262 aaKnown RBP13.93□□□□□ -0.18
FAM3B-206ENST00000518236 EVX2Q03828 476 aa13.93□□□□□ -0.18
FAM3B-206ENST00000518236 CCDC30Q5VVM6 783 aa13.93□□□□□ -0.18
FAM3B-206ENST00000518236 C16orf71Q8IYS4 520 aaPredicted RBP13.93□□□□□ -0.18
FAM3B-206ENST00000518236 FAM89AQ96GI7 184 aa13.93□□□□□ -0.18
FAM3B-206ENST00000518236 PCNTO95613 3336 aa13.93□□□□□ -0.18
FAM3B-206ENST00000518236 ZNF541Q9H0D2 1346 aa13.92□□□□□ -0.18
FAM3B-206ENST00000518236 FZD9O00144 591 aa13.92□□□□□ -0.18
FAM3B-206ENST00000518236 FSTL1Q12841 308 aa13.92□□□□□ -0.18
FAM3B-206ENST00000518236 RIC3Q7Z5B4 369 aa13.92□□□□□ -0.18
FAM3B-206ENST00000518236 SALL2Q9Y467 1007 aaPredicted RBP13.92□□□□□ -0.18
FAM3B-206ENST00000518236 ATP6V0A2Q9Y487 856 aa13.92□□□□□ -0.18
FAM3B-206ENST00000518236 COL4A5P29400 1685 aa13.91□□□□□ -0.18
FAM3B-206ENST00000518236 BBOX1O75936 387 aa13.91□□□□□ -0.18
FAM3B-206ENST00000518236 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
FAM3B-206ENST00000518236 SF3B3Q15393 1217 aaKnown RBP13.91□□□□□ -0.18
FAM3B-206ENST00000518236 TWISTNBQ3B726 338 aaPredicted RBP13.91□□□□□ -0.18
FAM3B-206ENST00000518236 WDR63Q8IWG1 891 aa13.91□□□□□ -0.18
FAM3B-206ENST00000518236 ANKRD36CQ5JPF3 1778 aa13.91□□□□□ -0.18
FAM3B-206ENST00000518236 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.18
FAM3B-206ENST00000518236 APLP1P51693 650 aa13.9□□□□□ -0.18
FAM3B-206ENST00000518236 GRAPQ13588 217 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms