RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 ZNF277Q9NRM2 450 aaPredicted RBP13.71□□□□□ -0.21
SPIDR-205ENST00000518060 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.21
SPIDR-205ENST00000518060 CACNA1SQ13698 1873 aa13.71□□□□□ -0.21
SPIDR-205ENST00000518060 SLX4Q8IY92 1834 aa13.71□□□□□ -0.22
SPIDR-205ENST00000518060 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPIDR-205ENST00000518060 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
SPIDR-205ENST00000518060 RBM46Q8TBY0 533 aaKnown RBP13.7□□□□□ -0.22
SPIDR-205ENST00000518060 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
SPIDR-205ENST00000518060 NUP98P52948 1817 aa13.69□□□□□ -0.22
SPIDR-205ENST00000518060 PPEF1O14829 653 aaPredicted RBP13.69□□□□□ -0.22
SPIDR-205ENST00000518060 CRY2Q49AN0 593 aa13.69□□□□□ -0.22
SPIDR-205ENST00000518060 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
SPIDR-205ENST00000518060 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
SPIDR-205ENST00000518060 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
SPIDR-205ENST00000518060 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
SPIDR-205ENST00000518060 TRMT112Q9UI30 125 aaKnown RBP13.69□□□□□ -0.22
SPIDR-205ENST00000518060 SBF1O95248 1867 aa13.69□□□□□ -0.22
SPIDR-205ENST00000518060 RIC1Q4ADV7 1423 aa13.68□□□□□ -0.22
SPIDR-205ENST00000518060 ZNF853P0CG23 659 aa13.68□□□□□ -0.22
SPIDR-205ENST00000518060 HCLS1P14317 486 aaPredicted RBP13.68□□□□□ -0.22
SPIDR-205ENST00000518060 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
SPIDR-205ENST00000518060 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
SPIDR-205ENST00000518060 TCIRG1Q13488 830 aa13.68□□□□□ -0.22
SPIDR-205ENST00000518060 C3orf67Q6ZVT6 689 aa13.68□□□□□ -0.22
SPIDR-205ENST00000518060 NLRP10Q86W26 655 aa13.68□□□□□ -0.22
SPIDR-205ENST00000518060 PLBD2Q8NHP8 589 aa13.68□□□□□ -0.22
SPIDR-205ENST00000518060 SALL2Q9Y467 1007 aaPredicted RBP13.68□□□□□ -0.22
SPIDR-205ENST00000518060 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
SPIDR-205ENST00000518060 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
SPIDR-205ENST00000518060 ANKRD13DQ6ZTN6 518 aa13.67□□□□□ -0.22
SPIDR-205ENST00000518060 SYNE4Q8N205 404 aa13.67□□□□□ -0.22
SPIDR-205ENST00000518060 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
SPIDR-205ENST00000518060 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
SPIDR-205ENST00000518060 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
SPIDR-205ENST00000518060 FER1L6Q2WGJ9 1857 aa13.66□□□□□ -0.22
SPIDR-205ENST00000518060 DDNO94850 711 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-205ENST00000518060 HOXA10P31260 410 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-205ENST00000518060 IARSP41252 1262 aaKnown RBP13.66□□□□□ -0.22
SPIDR-205ENST00000518060 APLP1P51693 650 aa13.66□□□□□ -0.22
SPIDR-205ENST00000518060 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
SPIDR-205ENST00000518060 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
SPIDR-205ENST00000518060 SMC1BQ8NDV3 1235 aa13.66□□□□□ -0.22
SPIDR-205ENST00000518060 CRAMP1Q96RY5 1269 aa13.66□□□□□ -0.22
SPIDR-205ENST00000518060 FSTL1Q12841 308 aa13.65□□□□□ -0.22
SPIDR-205ENST00000518060 RTL5Q5HYW3 569 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-205ENST00000518060 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
SPIDR-205ENST00000518060 ABCC4O15439 1325 aa13.64□□□□□ -0.23
SPIDR-205ENST00000518060 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
SPIDR-205ENST00000518060 DDX46Q7L014 1031 aaKnown RBP13.64□□□□□ -0.23
SPIDR-205ENST00000518060 SLC51AQ86UW1 340 aa13.64□□□□□ -0.23
SPIDR-205ENST00000518060 JDP2Q8WYK2 163 aa13.64□□□□□ -0.23
SPIDR-205ENST00000518060 PHAXQ9H814 394 aaKnown RBP13.64□□□□□ -0.23
SPIDR-205ENST00000518060 ZNF541Q9H0D2 1346 aa13.64□□□□□ -0.23
SPIDR-205ENST00000518060 SLC10A5Q5PT55 438 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 FAM9BQ8IZU0 186 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 LARGE2Q8N3Y3 721 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 FAM89AQ96GI7 184 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 PSMD1Q99460 953 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 MYD88Q99836 296 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 STK31Q9BXU1 1019 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 CHMP4AQ9BY43 222 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 CCDC88AQ3V6T2 1871 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 ANKRD36CQ5JPF3 1778 aa13.63□□□□□ -0.23
SPIDR-205ENST00000518060 IQCA1LA6NCM1 817 aa13.62□□□□□ -0.23
SPIDR-205ENST00000518060 DDX58O95786 925 aaKnown RBP13.62□□□□□ -0.23
SPIDR-205ENST00000518060 HTRA3P83110 453 aa13.62□□□□□ -0.23
SPIDR-205ENST00000518060 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
SPIDR-205ENST00000518060 TSPYL6Q8N831 410 aa13.62□□□□□ -0.23
SPIDR-205ENST00000518060 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
SPIDR-205ENST00000518060 GJA3Q9Y6H8 435 aa13.62□□□□□ -0.23
SPIDR-205ENST00000518060 CEP350Q5VT06 3117 aa13.62□□□□□ -0.23
SPIDR-205ENST00000518060 PPIP5K2O43314 1243 aa13.61□□□□□ -0.23
SPIDR-205ENST00000518060 EIF6P56537 245 aaKnown RBP13.61□□□□□ -0.23
SPIDR-205ENST00000518060 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
SPIDR-205ENST00000518060 DPP8Q6V1X1 898 aaPredicted RBP13.61□□□□□ -0.23
SPIDR-205ENST00000518060 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
SPIDR-205ENST00000518060 POTECB2RU33 542 aa13.6□□□□□ -0.23
SPIDR-205ENST00000518060 IRS4O14654 1257 aaPredicted RBP13.6□□□□□ -0.23
SPIDR-205ENST00000518060 GRAPQ13588 217 aa13.6□□□□□ -0.23
SPIDR-205ENST00000518060 TWISTNBQ3B726 338 aaPredicted RBP13.6□□□□□ -0.23
SPIDR-205ENST00000518060 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
SPIDR-205ENST00000518060 NIM1KQ8IY84 436 aa13.6□□□□□ -0.23
SPIDR-205ENST00000518060 GRAPLQ8TC17 118 aaPredicted RBP13.6□□□□□ -0.23
SPIDR-205ENST00000518060 WDR90Q96KV7 1748 aa13.6□□□□□ -0.23
SPIDR-205ENST00000518060 DICER1Q9UPY3 1922 aaKnown RBP13.59□□□□□ -0.23
SPIDR-205ENST00000518060 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
SPIDR-205ENST00000518060 BBOX1O75936 387 aa13.59□□□□□ -0.23
SPIDR-205ENST00000518060 AOC3Q16853 763 aa13.59□□□□□ -0.23
SPIDR-205ENST00000518060 SUPT20HQ8NEM7 779 aa13.59□□□□□ -0.23
SPIDR-205ENST00000518060 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
SPIDR-205ENST00000518060 MAP3K2Q9Y2U5 619 aa13.59□□□□□ -0.23
SPIDR-205ENST00000518060 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
SPIDR-205ENST00000518060 FZD9O00144 591 aa13.58□□□□□ -0.24
SPIDR-205ENST00000518060 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
SPIDR-205ENST00000518060 POTEJP0CG39 1038 aa13.58□□□□□ -0.24
SPIDR-205ENST00000518060 LMOD1P29536 600 aaPredicted RBP13.58□□□□□ -0.24
SPIDR-205ENST00000518060 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
SPIDR-205ENST00000518060 MPNDQ8N594 471 aa13.58□□□□□ -0.24
SPIDR-205ENST00000518060 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms