RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 STAP2Q9UGK3 403 aa13.13□□□□□ -0.31
SPIDR-204ENST00000517824 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
SPIDR-204ENST00000517824 NEURL1BA8MQ27 555 aa13.12□□□□□ -0.31
SPIDR-204ENST00000517824 K7ELQ4 463 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-204ENST00000517824 NBPF14Q5TI25 921 aa13.12□□□□□ -0.31
SPIDR-204ENST00000517824 PTF1AQ7RTS3 328 aa13.12□□□□□ -0.31
SPIDR-204ENST00000517824 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
SPIDR-204ENST00000517824 UTYO14607 1347 aa13.12□□□□□ -0.31
SPIDR-204ENST00000517824 GLRX3O76003 335 aaKnown RBP13.11□□□□□ -0.31
SPIDR-204ENST00000517824 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
SPIDR-204ENST00000517824 GCKRQ14397 625 aa13.11□□□□□ -0.31
SPIDR-204ENST00000517824 TSHZ3Q63HK5 1081 aa13.11□□□□□ -0.31
SPIDR-204ENST00000517824 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
SPIDR-204ENST00000517824 SUCLG2Q96I99 432 aa13.11□□□□□ -0.31
SPIDR-204ENST00000517824 BICC1Q9H694 974 aaKnown RBP13.11□□□□□ -0.31
SPIDR-204ENST00000517824 NUP98P52948 1817 aa13.11□□□□□ -0.31
SPIDR-204ENST00000517824 SALL3Q9BXA9 1300 aa13.11□□□□□ -0.31
SPIDR-204ENST00000517824 PDIA6Q15084 440 aa13.1□□□□□ -0.31
SPIDR-204ENST00000517824 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-204ENST00000517824 KIF6Q6ZMV9 814 aa13.1□□□□□ -0.31
SPIDR-204ENST00000517824 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
SPIDR-204ENST00000517824 AACSQ86V21 672 aa13.1□□□□□ -0.31
SPIDR-204ENST00000517824 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
SPIDR-204ENST00000517824 ESYT1Q9BSJ8 1104 aa13.1□□□□□ -0.31
SPIDR-204ENST00000517824 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-204ENST00000517824 ANO2Q9NQ90 1003 aa13.1□□□□□ -0.31
SPIDR-204ENST00000517824 DIAPH3Q9NSV4 1193 aa13.1□□□□□ -0.31
SPIDR-204ENST00000517824 CIZ1Q9ULV3 898 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-204ENST00000517824 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
SPIDR-204ENST00000517824 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
SPIDR-204ENST00000517824 DDB1Q16531 1140 aa13.09□□□□□ -0.31
SPIDR-204ENST00000517824 UBE3BQ7Z3V4 1068 aa13.09□□□□□ -0.31
SPIDR-204ENST00000517824 MARCH10Q8NA82 808 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-204ENST00000517824 USP26Q9BXU7 913 aa13.09□□□□□ -0.31
SPIDR-204ENST00000517824 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-204ENST00000517824 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
SPIDR-204ENST00000517824 MYH7P12883 1935 aa13.09□□□□□ -0.31
SPIDR-204ENST00000517824 HIP1O00291 1037 aa13.08□□□□□ -0.32
SPIDR-204ENST00000517824 PLSCR1O15162 318 aa13.08□□□□□ -0.32
SPIDR-204ENST00000517824 KCNQ2O43526 872 aa13.08□□□□□ -0.32
SPIDR-204ENST00000517824 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-204ENST00000517824 PROM2Q8N271 834 aa13.08□□□□□ -0.32
SPIDR-204ENST00000517824 SPON1Q9HCB6 807 aa13.08□□□□□ -0.32
SPIDR-204ENST00000517824 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.32
SPIDR-204ENST00000517824 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-204ENST00000517824 ZNF330Q9Y3S2 320 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-204ENST00000517824 A0A087WZG4 1122 aa13.07□□□□□ -0.32
SPIDR-204ENST00000517824 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
SPIDR-204ENST00000517824 PTMSP20962 102 aa13.07□□□□□ -0.32
SPIDR-204ENST00000517824 CHMLP26374 656 aa13.07□□□□□ -0.32
SPIDR-204ENST00000517824 GBP4Q96PP9 640 aa13.07□□□□□ -0.32
SPIDR-204ENST00000517824 CDCA7Q9BWT1 371 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-204ENST00000517824 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-204ENST00000517824 SIL1Q9H173 461 aa13.07□□□□□ -0.32
SPIDR-204ENST00000517824 USP42Q9H9J4 1324 aaKnown RBP13.07□□□□□ -0.32
SPIDR-204ENST00000517824 COL15A1P39059 1388 aa13.07□□□□□ -0.32
SPIDR-204ENST00000517824 DDX11L8A8MPP1 907 aa13.06□□□□□ -0.32
SPIDR-204ENST00000517824 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-204ENST00000517824 STARD3NLO95772 234 aa13.06□□□□□ -0.32
SPIDR-204ENST00000517824 PA2G4Q9UQ80 394 aaKnown RBP13.06□□□□□ -0.32
SPIDR-204ENST00000517824 SPEF2Q9C093 1822 aa13.06□□□□□ -0.32
SPIDR-204ENST00000517824 BCL9O00512 1426 aa13.05□□□□□ -0.32
SPIDR-204ENST00000517824 ATP5J2-PTCD1G3V325 749 aa13.05□□□□□ -0.32
SPIDR-204ENST00000517824 EPB41L2O43491 1005 aaKnown RBP13.05□□□□□ -0.32
SPIDR-204ENST00000517824 MAP4K4O95819 1239 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-204ENST00000517824 MCM2P49736 904 aa13.05□□□□□ -0.32
SPIDR-204ENST00000517824 IL27Q8NEV9 243 aa13.05□□□□□ -0.32
SPIDR-204ENST00000517824 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
SPIDR-204ENST00000517824 PDGFDQ9GZP0 370 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-204ENST00000517824 ANTXR1Q9H6X2 564 aa13.05□□□□□ -0.32
SPIDR-204ENST00000517824 GOLGB1Q14789 3259 aaKnown RBP13.04□□□□□ -0.32
SPIDR-204ENST00000517824 GOLGA6L22H0YM25 854 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 EXOC5O00471 708 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 YY1P25490 414 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 ANAPC15P60006 121 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 PI4K2BQ8TCG2 481 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-204ENST00000517824 ARXQ96QS3 562 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 PPP1R1BQ9UD71 204 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-204ENST00000517824 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-204ENST00000517824 LAMB2P55268 1798 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
SPIDR-204ENST00000517824 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
SPIDR-204ENST00000517824 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
SPIDR-204ENST00000517824 KIF2CQ99661 725 aa13.03□□□□□ -0.32
SPIDR-204ENST00000517824 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.32
SPIDR-204ENST00000517824 A1BGP04217 495 aa13.02□□□□□ -0.33
SPIDR-204ENST00000517824 KCNJ4P48050 445 aa13.02□□□□□ -0.33
SPIDR-204ENST00000517824 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.33
SPIDR-204ENST00000517824 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.33
SPIDR-204ENST00000517824 FSD1Q9BTV5 496 aa13.02□□□□□ -0.33
SPIDR-204ENST00000517824 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
SPIDR-204ENST00000517824 GSE1Q14687 1217 aa13.01□□□□□ -0.33
SPIDR-204ENST00000517824 TAF7LQ5H9L4 462 aa13.01□□□□□ -0.33
SPIDR-204ENST00000517824 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
SPIDR-204ENST00000517824 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
SPIDR-204ENST00000517824 COPRSQ9NQ92 184 aa13.01□□□□□ -0.33
SPIDR-204ENST00000517824 RAD50Q92878 1312 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms