RNA–Protein interactions for RNA: ENST00000517479.1

CDK16-209, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-209ENST00000517479 RIC1Q4ADV7 1423 aa19■□□□□ 0.63
CDK16-209ENST00000517479 LMNB1P20700 586 aa18.99■□□□□ 0.63
CDK16-209ENST00000517479 SYNE4Q8N205 404 aa18.99■□□□□ 0.63
CDK16-209ENST00000517479 C7orf43Q8WVR3 580 aa18.99■□□□□ 0.63
CDK16-209ENST00000517479 DBF4Q9UBU7 674 aaPredicted RBP18.99■□□□□ 0.63
CDK16-209ENST00000517479 CCDC27Q2M243 656 aa18.98■□□□□ 0.63
CDK16-209ENST00000517479 CRY2Q49AN0 593 aa18.98■□□□□ 0.63
CDK16-209ENST00000517479 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
CDK16-209ENST00000517479 PHAXQ9H814 394 aaKnown RBP18.98■□□□□ 0.63
CDK16-209ENST00000517479 NLRP10Q86W26 655 aa18.97■□□□□ 0.63
CDK16-209ENST00000517479 TCIRG1Q13488 830 aa18.96■□□□□ 0.63
CDK16-209ENST00000517479 PARP10Q53GL7 1025 aa18.96■□□□□ 0.63
CDK16-209ENST00000517479 PPP1R42Q7Z4L9 355 aa18.96■□□□□ 0.63
CDK16-209ENST00000517479 UTP14AQ9BVJ6 771 aaKnown RBP18.96■□□□□ 0.63
CDK16-209ENST00000517479 SNED1Q8TER0 1413 aa18.95■□□□□ 0.62
CDK16-209ENST00000517479 TCERG1O14776 1098 aaKnown RBP18.95■□□□□ 0.62
CDK16-209ENST00000517479 ANKRD13DQ6ZTN6 518 aa18.95■□□□□ 0.62
CDK16-209ENST00000517479 PLBD2Q8NHP8 589 aa18.95■□□□□ 0.62
CDK16-209ENST00000517479 TAOK3Q9H2K8 898 aa18.95■□□□□ 0.62
CDK16-209ENST00000517479 HYPKQ9NX55 129 aa18.95■□□□□ 0.62
CDK16-209ENST00000517479 COL4A1P02462 1669 aa18.95■□□□□ 0.62
CDK16-209ENST00000517479 ATP5J2-PTCD1G3V325 749 aa18.94■□□□□ 0.62
CDK16-209ENST00000517479 HSP90AB3PQ58FF7 597 aa18.94■□□□□ 0.62
CDK16-209ENST00000517479 LTBP3Q9NS15 1303 aa18.94■□□□□ 0.62
CDK16-209ENST00000517479 HCLS1P14317 486 aaPredicted RBP18.93■□□□□ 0.62
CDK16-209ENST00000517479 CCDC93Q567U6 631 aa18.93■□□□□ 0.62
CDK16-209ENST00000517479 RPGRQ92834 1020 aaKnown RBP18.93■□□□□ 0.62
CDK16-209ENST00000517479 ISCA1Q9BUE6 129 aa18.93■□□□□ 0.62
CDK16-209ENST00000517479 ALDH1B1P30837 517 aa18.92■□□□□ 0.62
CDK16-209ENST00000517479 HOXA10P31260 410 aaPredicted RBP18.92■□□□□ 0.62
CDK16-209ENST00000517479 SPINK5Q9NQ38 1064 aaPredicted RBP18.92■□□□□ 0.62
CDK16-209ENST00000517479 TRMT112Q9UI30 125 aaKnown RBP18.92■□□□□ 0.62
CDK16-209ENST00000517479 FANCIQ9NVI1 1328 aa18.92■□□□□ 0.62
CDK16-209ENST00000517479 SLC10A5Q5PT55 438 aa18.91■□□□□ 0.62
CDK16-209ENST00000517479 RRAGCQ9HB90 399 aa18.91■□□□□ 0.62
CDK16-209ENST00000517479 CACNA1FO60840 1977 aa18.91■□□□□ 0.62
CDK16-209ENST00000517479 IL16Q14005 1332 aa18.91■□□□□ 0.62
CDK16-209ENST00000517479 ZC3H4Q9UPT8 1303 aaKnown RBP18.91■□□□□ 0.62
CDK16-209ENST00000517479 COL4A5P29400 1685 aa18.91■□□□□ 0.62
CDK16-209ENST00000517479 WDR90Q96KV7 1748 aa18.91■□□□□ 0.62
CDK16-209ENST00000517479 RTL5Q5HYW3 569 aaPredicted RBP18.9■□□□□ 0.62
CDK16-209ENST00000517479 SOGA3Q5TF21 947 aa18.9■□□□□ 0.62
CDK16-209ENST00000517479 ZNF277Q9NRM2 450 aaPredicted RBP18.9■□□□□ 0.62
CDK16-209ENST00000517479 KDM2BQ8NHM5 1336 aa18.9■□□□□ 0.62
CDK16-209ENST00000517479 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
CDK16-209ENST00000517479 TWISTNBQ3B726 338 aaPredicted RBP18.89■□□□□ 0.61
CDK16-209ENST00000517479 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
CDK16-209ENST00000517479 CCDC30Q5VVM6 783 aa18.89■□□□□ 0.61
CDK16-209ENST00000517479 RIC3Q7Z5B4 369 aa18.89■□□□□ 0.61
CDK16-209ENST00000517479 FAM89AQ96GI7 184 aa18.89■□□□□ 0.61
CDK16-209ENST00000517479 NLRP3Q96P20 1036 aa18.89■□□□□ 0.61
CDK16-209ENST00000517479 ABCC4O15439 1325 aa18.89■□□□□ 0.61
CDK16-209ENST00000517479 SH3TC1Q8TE82 1336 aa18.89■□□□□ 0.61
CDK16-209ENST00000517479 GLTPD2A6NH11 291 aa18.88■□□□□ 0.61
CDK16-209ENST00000517479 GOLGA2Q08379 1002 aa18.88■□□□□ 0.61
CDK16-209ENST00000517479 G2E3Q7L622 706 aa18.88■□□□□ 0.61
CDK16-209ENST00000517479 RBM17Q96I25 401 aaKnown RBP18.88■□□□□ 0.61
CDK16-209ENST00000517479 CRAMP1Q96RY5 1269 aa18.88■□□□□ 0.61
CDK16-209ENST00000517479 MYD88Q99836 296 aa18.88■□□□□ 0.61
CDK16-209ENST00000517479 RNF123Q5XPI4 1314 aa18.88■□□□□ 0.61
CDK16-209ENST00000517479 LRRC37AA6NMS7 1700 aa18.87■□□□□ 0.61
CDK16-209ENST00000517479 PPEF1O14829 653 aaPredicted RBP18.87■□□□□ 0.61
CDK16-209ENST00000517479 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
CDK16-209ENST00000517479 MYH3P11055 1940 aa18.86■□□□□ 0.61
CDK16-209ENST00000517479 POTECB2RU33 542 aa18.85■□□□□ 0.61
CDK16-209ENST00000517479 TOMM70O94826 608 aa18.85■□□□□ 0.61
CDK16-209ENST00000517479 EXOSC9Q06265 439 aaKnown RBP18.85■□□□□ 0.61
CDK16-209ENST00000517479 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
CDK16-209ENST00000517479 JARID2Q92833 1246 aaPredicted RBP18.85■□□□□ 0.61
CDK16-209ENST00000517479 SPEF2Q9C093 1822 aa18.84■□□□□ 0.61
CDK16-209ENST00000517479 ZNF541Q9H0D2 1346 aa18.84■□□□□ 0.61
CDK16-209ENST00000517479 DDNO94850 711 aaPredicted RBP18.84■□□□□ 0.61
CDK16-209ENST00000517479 IARSP41252 1262 aaKnown RBP18.84■□□□□ 0.61
CDK16-209ENST00000517479 MAP3K2Q9Y2U5 619 aa18.84■□□□□ 0.61
CDK16-209ENST00000517479 CEP350Q5VT06 3117 aa18.84■□□□□ 0.61
CDK16-209ENST00000517479 TRIM28Q13263 835 aaKnown RBP18.83■□□□□ 0.6
CDK16-209ENST00000517479 METTL22Q9BUU2 404 aaPredicted RBP18.83■□□□□ 0.6
CDK16-209ENST00000517479 DUOX1Q9NRD9 1551 aa18.83■□□□□ 0.6
CDK16-209ENST00000517479 ZNF521Q96K83 1311 aa18.82■□□□□ 0.6
CDK16-209ENST00000517479 SCN4AP35499 1836 aa18.82■□□□□ 0.6
CDK16-209ENST00000517479 PI4KAP2A4QPH2 592 aa18.82■□□□□ 0.6
CDK16-209ENST00000517479 VAMP4O75379 141 aa18.82■□□□□ 0.6
CDK16-209ENST00000517479 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
CDK16-209ENST00000517479 HSPA6P17066 643 aa18.82■□□□□ 0.6
CDK16-209ENST00000517479 PI4KAP1Q8N8J0 262 aa18.82■□□□□ 0.6
CDK16-209ENST00000517479 PSMD1Q99460 953 aa18.82■□□□□ 0.6
CDK16-209ENST00000517479 STK31Q9BXU1 1019 aa18.82■□□□□ 0.6
CDK16-209ENST00000517479 LTBP1Q14766 1721 aa18.81■□□□□ 0.6
CDK16-209ENST00000517479 IRS4O14654 1257 aaPredicted RBP18.81■□□□□ 0.6
CDK16-209ENST00000517479 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
CDK16-209ENST00000517479 KSR2Q6VAB6 950 aa18.81■□□□□ 0.6
CDK16-209ENST00000517479 C16orf71Q8IYS4 520 aaPredicted RBP18.81■□□□□ 0.6
CDK16-209ENST00000517479 ATP6V0A2Q9Y487 856 aa18.81■□□□□ 0.6
CDK16-209ENST00000517479 DDX58O95786 925 aaKnown RBP18.8■□□□□ 0.6
CDK16-209ENST00000517479 GRAPQ13588 217 aa18.8■□□□□ 0.6
CDK16-209ENST00000517479 CC2D2BQ6DHV5 1058 aa18.8■□□□□ 0.6
CDK16-209ENST00000517479 DPY19L2Q6NUT2 758 aa18.8■□□□□ 0.6
CDK16-209ENST00000517479 DDX46Q7L014 1031 aaKnown RBP18.8■□□□□ 0.6
CDK16-209ENST00000517479 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
CDK16-209ENST00000517479 RBM46Q8TBY0 533 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms