RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 ISCA1Q9BUE6 129 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 PDGFDQ9GZP0 370 aaPredicted RBP6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 BCL2L12Q9HB09 334 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 CHMP3Q9Y3E7 222 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 SUPT16HQ9Y5B9 1047 aaKnown RBP6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 UBR3Q6ZT12 1888 aa6.85□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ATP10DQ9P241 1426 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 QSER1Q2KHR3 1735 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 ADCY9O60503 1353 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 NEURL1BA8MQ27 555 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 H0YIN7 160 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 GRM8O00222 908 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 POLRMTO00411 1230 aaKnown RBP6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 IRS4O14654 1257 aaPredicted RBP6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 PLIN1O60240 522 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 PCCAP05165 728 aaPredicted RBP6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 UBTFL1P0CB47 393 aaPredicted RBP6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TRIM27P14373 513 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 RRP1P56182 461 aaKnown RBP6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 GCKRQ14397 625 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 PDE3AQ14432 1141 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 TAF7LQ5H9L4 462 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 BEND3Q5T5X7 828 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 UBE3BQ7Z3V4 1068 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 FAM89AQ96GI7 184 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 DDX19BQ9UMR2 479 aa6.84□□□□□ -1.31
SCARNA16.4-201ENST00000516956 MYH14Q7Z406 1995 aaKnown RBP6.84□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CACNA1FO60840 1977 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 IGKV5-2P06315 115 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 DDR1Q08345 913 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 ERFEQ4G0M1 354 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 INTS3Q68E01 1043 aaKnown RBP6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 PRR5LQ6MZQ0 368 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 DDX46Q7L014 1031 aaKnown RBP6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 NUTM1Q86Y26 1132 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 C2CD5Q86YS7 1000 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CCDC24Q8N4L8 307 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 TMEM57Q8N5G2 664 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 PANK1Q8TE04 598 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 ZNF622Q969S3 477 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 RBM17Q96I25 401 aaKnown RBP6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 BRIP1Q9BX63 1249 aa6.83□□□□□ -1.32
SCARNA16.4-201ENST00000516956 IBTKQ9P2D0 1353 aaPredicted RBP6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 ABCC4O15439 1325 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 UBN2Q6ZU65 1347 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 SCN7AQ01118 1682 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 PXDNLA1KZ92 1463 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 H7C1W4 665 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 PDE8AO60658 829 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 NTSR2O95665 410 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 GNAI2P04899 355 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 HCLS1P14317 486 aaPredicted RBP6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 ALDH1B1P30837 517 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 TGFB2P61812 414 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 MVPQ14764 893 aaKnown RBP6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CCDC152Q4G0S7 254 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 PELP1Q8IZL8 1130 aaKnown RBP6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 JARID2Q92833 1246 aaPredicted RBP6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 COG6Q9Y2V7 657 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CD2APQ9Y5K6 639 aa6.82□□□□□ -1.32
SCARNA16.4-201ENST00000516956 C4AP0C0L4 1744 aa6.81□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CDHR2Q9BYE9 1310 aa6.81□□□□□ -1.32
SCARNA16.4-201ENST00000516956 TUBGCP6Q96RT7 1819 aa6.81□□□□□ -1.32
SCARNA16.4-201ENST00000516956 NPR1P16066 1061 aa6.81□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CCDC57Q2TAC2 916 aa6.81□□□□□ -1.32
SCARNA16.4-201ENST00000516956 SLC10A5Q5PT55 438 aa6.81□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CNKSR1Q969H4 720 aa6.81□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CDC5LQ99459 802 aaKnown RBP6.81□□□□□ -1.32
SCARNA16.4-201ENST00000516956 ZBTB47Q9UFB7 747 aaPredicted RBP6.81□□□□□ -1.32
SCARNA16.4-201ENST00000516956 BCORQ6W2J9 1755 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CASZ1Q86V15 1759 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 ARFGEF2Q9Y6D5 1785 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 ANKRD18BA2A2Z9 1011 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 HMMRO75330 724 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 IGHMBP2P38935 993 aaKnown RBP6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 PTGER2P43116 358 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CTSWP56202 376 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 IFIT5Q13325 482 aaKnown RBP6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 AAMPQ13685 434 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 STYK1Q6J9G0 422 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 TTLL6Q8N841 843 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 MASTLQ96GX5 879 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CCDC85AQ96PX6 553 aaPredicted RBP6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 MPHOSPH8Q99549 860 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 FHDC1Q9C0D6 1143 aaPredicted RBP6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 USP44Q9H0E7 712 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 PIM2Q9P1W9 311 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 TNNQ9UQP3 1299 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 NUP98P52948 1817 aa6.8□□□□□ -1.32
SCARNA16.4-201ENST00000516956 A0A0G2JLW4 131 aa6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 NBPF7P0C2Y1 421 aaPredicted RBP6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 DPEP1P16444 411 aa6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 CHRNA5P30532 468 aa6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 OS9Q13438 667 aaPredicted RBP6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 GPR162Q16538 588 aa6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 DALRD3Q5D0E6 543 aaKnown RBP6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 LMBR1LQ6UX01 489 aa6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 TMC4Q7Z404 712 aa6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 ANKRD18AQ8IVF6 992 aa6.79□□□□□ -1.32
SCARNA16.4-201ENST00000516956 SYNE4Q8N205 404 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms