RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PI4KAP1Q8N8J0 262 aa14.3□□□□□ -0.12
SCARNA20-201ENST00000516768 CNKSR1Q969H4 720 aa14.3□□□□□ -0.12
SCARNA20-201ENST00000516768 METTL22Q9BUU2 404 aaPredicted RBP14.3□□□□□ -0.12
SCARNA20-201ENST00000516768 TRMT112Q9UI30 125 aaKnown RBP14.3□□□□□ -0.12
SCARNA20-201ENST00000516768 IBTKQ9P2D0 1353 aaPredicted RBP14.3□□□□□ -0.12
SCARNA20-201ENST00000516768 KIAA1551Q9HCM1 1747 aa14.29□□□□□ -0.12
SCARNA20-201ENST00000516768 NPR1P16066 1061 aa14.29□□□□□ -0.12
SCARNA20-201ENST00000516768 YY1P25490 414 aa14.29□□□□□ -0.12
SCARNA20-201ENST00000516768 CRY2Q49AN0 593 aa14.29□□□□□ -0.12
SCARNA20-201ENST00000516768 ARHGAP27Q6ZUM4 889 aa14.29□□□□□ -0.12
SCARNA20-201ENST00000516768 SYNE4Q8N205 404 aa14.29□□□□□ -0.12
SCARNA20-201ENST00000516768 MAP3K2Q9Y2U5 619 aa14.29□□□□□ -0.12
SCARNA20-201ENST00000516768 RNF123Q5XPI4 1314 aa14.29□□□□□ -0.12
SCARNA20-201ENST00000516768 ALDH1B1P30837 517 aa14.28□□□□□ -0.12
SCARNA20-201ENST00000516768 FLIIQ13045 1269 aa14.28□□□□□ -0.12
SCARNA20-201ENST00000516768 CCDC191Q8NCU4 936 aa14.28□□□□□ -0.12
SCARNA20-201ENST00000516768 NLRP3Q96P20 1036 aa14.28□□□□□ -0.12
SCARNA20-201ENST00000516768 SH3TC1Q8TE82 1336 aa14.27□□□□□ -0.12
SCARNA20-201ENST00000516768 HOXA10P31260 410 aaPredicted RBP14.27□□□□□ -0.13
SCARNA20-201ENST00000516768 ZNF428Q96B54 188 aa14.27□□□□□ -0.13
SCARNA20-201ENST00000516768 FAM89AQ96GI7 184 aa14.27□□□□□ -0.13
SCARNA20-201ENST00000516768 MYD88Q99836 296 aa14.27□□□□□ -0.13
SCARNA20-201ENST00000516768 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCARNA20-201ENST00000516768 FKBP5Q13451 457 aaPredicted RBP14.26□□□□□ -0.13
SCARNA20-201ENST00000516768 ZBTB38Q8NAP3 1195 aaPredicted RBP14.26□□□□□ -0.13
SCARNA20-201ENST00000516768 C7orf43Q8WVR3 580 aa14.26□□□□□ -0.13
SCARNA20-201ENST00000516768 ANKRD31Q8N7Z5 1873 aa14.25□□□□□ -0.13
SCARNA20-201ENST00000516768 ADCY9O60503 1353 aa14.25□□□□□ -0.13
SCARNA20-201ENST00000516768 ABCC12Q96J65 1359 aa14.25□□□□□ -0.13
SCARNA20-201ENST00000516768 C21orf2O43822 256 aa14.25□□□□□ -0.13
SCARNA20-201ENST00000516768 IGKV5-2P06315 115 aa14.25□□□□□ -0.13
SCARNA20-201ENST00000516768 HCLS1P14317 486 aaPredicted RBP14.25□□□□□ -0.13
SCARNA20-201ENST00000516768 NEXNQ0ZGT2 675 aa14.25□□□□□ -0.13
SCARNA20-201ENST00000516768 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
SCARNA20-201ENST00000516768 C3orf67Q6ZVT6 689 aa14.25□□□□□ -0.13
SCARNA20-201ENST00000516768 RIC1Q4ADV7 1423 aa14.24□□□□□ -0.13
SCARNA20-201ENST00000516768 PCCAP05165 728 aaPredicted RBP14.24□□□□□ -0.13
SCARNA20-201ENST00000516768 CT47B1P0C2W7 299 aaPredicted RBP14.24□□□□□ -0.13
SCARNA20-201ENST00000516768 DNAAF4Q8WXU2 420 aa14.24□□□□□ -0.13
SCARNA20-201ENST00000516768 RBM17Q96I25 401 aaKnown RBP14.24□□□□□ -0.13
SCARNA20-201ENST00000516768 CRAMP1Q96RY5 1269 aa14.24□□□□□ -0.13
SCARNA20-201ENST00000516768 CWC25Q9NXE8 425 aaPredicted RBP14.24□□□□□ -0.13
SCARNA20-201ENST00000516768 BRCA1P38398 1863 aaKnown RBP14.24□□□□□ -0.13
SCARNA20-201ENST00000516768 RTL5Q5HYW3 569 aaPredicted RBP14.23□□□□□ -0.13
SCARNA20-201ENST00000516768 MRPL50Q8N5N7 158 aaKnown RBP14.23□□□□□ -0.13
SCARNA20-201ENST00000516768 SSH1Q8WYL5 1049 aa14.23□□□□□ -0.13
SCARNA20-201ENST00000516768 RPGRQ92834 1020 aaKnown RBP14.23□□□□□ -0.13
SCARNA20-201ENST00000516768 NEURL1BA8MQ27 555 aa14.22□□□□□ -0.13
SCARNA20-201ENST00000516768 IRS4O14654 1257 aaPredicted RBP14.22□□□□□ -0.13
SCARNA20-201ENST00000516768 SF3B3Q15393 1217 aaKnown RBP14.22□□□□□ -0.13
SCARNA20-201ENST00000516768 CWF19L2Q2TBE0 894 aaKnown RBP14.22□□□□□ -0.13
SCARNA20-201ENST00000516768 ALDH1L2Q3SY69 923 aa14.22□□□□□ -0.13
SCARNA20-201ENST00000516768 SOGA3Q5TF21 947 aa14.22□□□□□ -0.13
SCARNA20-201ENST00000516768 LINS1Q8NG48 757 aa14.22□□□□□ -0.13
SCARNA20-201ENST00000516768 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
SCARNA20-201ENST00000516768 CACNA1FO60840 1977 aa14.22□□□□□ -0.13
SCARNA20-201ENST00000516768 F6X3S4 739 aa14.21□□□□□ -0.13
SCARNA20-201ENST00000516768 H7C1W4 665 aa14.21□□□□□ -0.13
SCARNA20-201ENST00000516768 HSP90B1P14625 803 aaKnown RBP14.21□□□□□ -0.13
SCARNA20-201ENST00000516768 CHD4Q14839 1912 aa14.21□□□□□ -0.14
SCARNA20-201ENST00000516768 BBOX1O75936 387 aa14.2□□□□□ -0.14
SCARNA20-201ENST00000516768 GCKRQ14397 625 aa14.2□□□□□ -0.14
SCARNA20-201ENST00000516768 BEND3Q5T5X7 828 aa14.2□□□□□ -0.14
SCARNA20-201ENST00000516768 JARID2Q92833 1246 aaPredicted RBP14.2□□□□□ -0.14
SCARNA20-201ENST00000516768 ARFGEF1Q9Y6D6 1849 aa14.2□□□□□ -0.14
SCARNA20-201ENST00000516768 DLEC1Q9Y238 1755 aa14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 NFKBIEO00221 500 aa14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 PDE8AO60658 829 aa14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 BRPF1P55201 1214 aaPredicted RBP14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 CC2D2BQ6DHV5 1058 aa14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 DDX46Q7L014 1031 aaKnown RBP14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 RTKN2Q8IZC4 609 aa14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 ZNF784Q8NCA9 323 aaPredicted RBP14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 SLX4Q8IY92 1834 aa14.19□□□□□ -0.14
SCARNA20-201ENST00000516768 CDHR2Q9BYE9 1310 aa14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 LMNB1P20700 586 aa14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 PRELPP51888 382 aa14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 RARSP54136 660 aaKnown RBP14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 GRIPAP1Q4V328 841 aa14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 OLFM4Q6UX06 510 aa14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 BCL2L13Q9BXK5 485 aa14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 ANKRD36CQ5JPF3 1778 aa14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 ARFGEF2Q9Y6D5 1785 aa14.18□□□□□ -0.14
SCARNA20-201ENST00000516768 PTPRCP08575 1304 aa14.17□□□□□ -0.14
SCARNA20-201ENST00000516768 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
SCARNA20-201ENST00000516768 LTBP3Q9NS15 1303 aa14.17□□□□□ -0.14
SCARNA20-201ENST00000516768 RASSF7Q02833 373 aa14.17□□□□□ -0.14
SCARNA20-201ENST00000516768 SP8Q8IXZ3 490 aa14.17□□□□□ -0.14
SCARNA20-201ENST00000516768 RNF181Q9P0P0 153 aa14.17□□□□□ -0.14
SCARNA20-201ENST00000516768 ATP6V0A2Q9Y487 856 aa14.17□□□□□ -0.14
SCARNA20-201ENST00000516768 COL11A2P13942 1736 aaPredicted RBP14.17□□□□□ -0.14
SCARNA20-201ENST00000516768 ABCC4O15439 1325 aa14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 PPEF1O14829 653 aaPredicted RBP14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 ALDH1L1O75891 902 aa14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 CASP7P55210 303 aa14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 GRAPQ13588 217 aa14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 SLC4A10Q6U841 1118 aa14.16□□□□□ -0.14
SCARNA20-201ENST00000516768 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms