RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 TRERF1Q96PN7 1200 aa11.33□□□□□ -0.6
SNORA48.9-201ENST00000516419 DCTN4Q9UJW0 460 aa11.33□□□□□ -0.6
SNORA48.9-201ENST00000516419 DCDC2BA2VCK2 349 aa11.32□□□□□ -0.6
SNORA48.9-201ENST00000516419 NDUFB5O43674 189 aa11.32□□□□□ -0.6
SNORA48.9-201ENST00000516419 MAPTP10636 758 aaKnown RBP11.32□□□□□ -0.6
SNORA48.9-201ENST00000516419 VEGFBP49765 207 aa11.32□□□□□ -0.6
SNORA48.9-201ENST00000516419 KCNQ4P56696 695 aa11.32□□□□□ -0.6
SNORA48.9-201ENST00000516419 RGL4Q8IZJ4 473 aa11.32□□□□□ -0.6
SNORA48.9-201ENST00000516419 GPR152Q8TDT2 470 aa11.32□□□□□ -0.6
SNORA48.9-201ENST00000516419 CCDC87Q9NVE4 849 aa11.32□□□□□ -0.6
SNORA48.9-201ENST00000516419 ATXN7L1Q9ULK2 861 aaPredicted RBP11.32□□□□□ -0.6
SNORA48.9-201ENST00000516419 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
SNORA48.9-201ENST00000516419 PCSK2P16519 638 aa11.31□□□□□ -0.6
SNORA48.9-201ENST00000516419 MARSP56192 900 aaKnown RBP11.31□□□□□ -0.6
SNORA48.9-201ENST00000516419 DNM1Q05193 864 aaKnown RBP11.31□□□□□ -0.6
SNORA48.9-201ENST00000516419 ABHD17AQ96GS6 310 aa11.31□□□□□ -0.6
SNORA48.9-201ENST00000516419 C11orf16Q9NQ32 467 aa11.31□□□□□ -0.6
SNORA48.9-201ENST00000516419 KCNH4Q9UQ05 1017 aa11.31□□□□□ -0.6
SNORA48.9-201ENST00000516419 RTCBQ9Y3I0 505 aaKnown RBP11.31□□□□□ -0.6
SNORA48.9-201ENST00000516419 TERTO14746 1132 aaKnown RBP11.3□□□□□ -0.6
SNORA48.9-201ENST00000516419 PDGFAP04085 211 aa11.3□□□□□ -0.6
SNORA48.9-201ENST00000516419 USP5P45974 858 aa11.3□□□□□ -0.6
SNORA48.9-201ENST00000516419 CITED4Q96RK1 184 aa11.3□□□□□ -0.6
SNORA48.9-201ENST00000516419 POLIQ9UNA4 740 aa11.3□□□□□ -0.6
SNORA48.9-201ENST00000516419 MAPK1P28482 360 aa11.29□□□□□ -0.6
SNORA48.9-201ENST00000516419 MFAP1P55081 439 aaKnown RBP11.29□□□□□ -0.6
SNORA48.9-201ENST00000516419 SFSWAPQ12872 951 aaKnown RBP11.29□□□□□ -0.6
SNORA48.9-201ENST00000516419 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
SNORA48.9-201ENST00000516419 SLC16A10Q8TF71 515 aa11.29□□□□□ -0.6
SNORA48.9-201ENST00000516419 NUDT16Q96DE0 195 aaKnown RBP11.29□□□□□ -0.6
SNORA48.9-201ENST00000516419 RBCK1Q9BYM8 510 aa11.29□□□□□ -0.6
SNORA48.9-201ENST00000516419 MARK1Q9P0L2 795 aa11.29□□□□□ -0.6
SNORA48.9-201ENST00000516419 GPR25O00155 361 aa11.28□□□□□ -0.6
SNORA48.9-201ENST00000516419 GRNP28799 593 aaKnown RBP11.28□□□□□ -0.6
SNORA48.9-201ENST00000516419 FNDC3AQ9Y2H6 1198 aaKnown RBP11.28□□□□□ -0.6
SNORA48.9-201ENST00000516419 USP20Q9Y2K6 914 aa11.28□□□□□ -0.6
SNORA48.9-201ENST00000516419 CCDC9Q9Y3X0 531 aaKnown RBP11.28□□□□□ -0.6
SNORA48.9-201ENST00000516419 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
SNORA48.9-201ENST00000516419 KCNMB2Q9Y691 235 aa11.27□□□□□ -0.61
SNORA48.9-201ENST00000516419 FGFR3P22607 806 aa11.26□□□□□ -0.61
SNORA48.9-201ENST00000516419 FAM182BQ5T319 152 aa11.26□□□□□ -0.61
SNORA48.9-201ENST00000516419 GJD3Q8N144 294 aa11.26□□□□□ -0.61
SNORA48.9-201ENST00000516419 TTC16Q8NEE8 873 aa11.26□□□□□ -0.61
SNORA48.9-201ENST00000516419 STRN4Q9NRL3 753 aa11.26□□□□□ -0.61
SNORA48.9-201ENST00000516419 HCN2Q9UL51 889 aa11.26□□□□□ -0.61
SNORA48.9-201ENST00000516419 EGFRP00533 1210 aa11.25□□□□□ -0.61
SNORA48.9-201ENST00000516419 EHHADHQ08426 723 aa11.25□□□□□ -0.61
SNORA48.9-201ENST00000516419 PDE3BQ13370 1112 aa11.25□□□□□ -0.61
SNORA48.9-201ENST00000516419 ZSCAN29Q8IWY8 852 aaPredicted RBP11.25□□□□□ -0.61
SNORA48.9-201ENST00000516419 UBAP1LF5GYI3 381 aa11.24□□□□□ -0.61
SNORA48.9-201ENST00000516419 CD33P20138 364 aa11.24□□□□□ -0.61
SNORA48.9-201ENST00000516419 GPR161Q8N6U8 529 aaKnown RBP11.24□□□□□ -0.61
SNORA48.9-201ENST00000516419 ASB16Q96NS5 453 aa11.24□□□□□ -0.61
SNORA48.9-201ENST00000516419 FAM129BQ96TA1 746 aa11.24□□□□□ -0.61
SNORA48.9-201ENST00000516419 XYLBO75191 536 aa11.23□□□□□ -0.61
SNORA48.9-201ENST00000516419 CCINQ13939 588 aa11.23□□□□□ -0.61
SNORA48.9-201ENST00000516419 TRIP4Q15650 581 aaPredicted RBP11.23□□□□□ -0.61
SNORA48.9-201ENST00000516419 C8orf34Q49A92 452 aa11.23□□□□□ -0.61
SNORA48.9-201ENST00000516419 TMC1Q8TDI8 760 aa11.23□□□□□ -0.61
SNORA48.9-201ENST00000516419 GGNBP2Q9H3C7 697 aa11.23□□□□□ -0.61
SNORA48.9-201ENST00000516419 ERCC3P19447 782 aa11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 CTBSQ01459 385 aa11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 SPEM2Q0P670 501 aa11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 NFX1Q12986 1120 aaKnown RBP11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 DNAJC14Q6Y2X3 702 aaPredicted RBP11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 TMC7Q7Z402 723 aa11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 IRF7Q92985 503 aa11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 DMRTB1Q96MA1 342 aa11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 GSX2Q9BZM3 304 aa11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 EFCC1Q9HA90 598 aa11.22□□□□□ -0.61
SNORA48.9-201ENST00000516419 GAS6Q14393 721 aa11.21□□□□□ -0.61
SNORA48.9-201ENST00000516419 PDE12Q6L8Q7 609 aaKnown RBP11.21□□□□□ -0.61
SNORA48.9-201ENST00000516419 XKR5Q6UX68 686 aa11.21□□□□□ -0.61
SNORA48.9-201ENST00000516419 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
SNORA48.9-201ENST00000516419 MX2P20592 715 aa11.2□□□□□ -0.62
SNORA48.9-201ENST00000516419 NEUROD1Q13562 356 aa11.19□□□□□ -0.62
SNORA48.9-201ENST00000516419 GRIN2CQ14957 1233 aa11.19□□□□□ -0.62
SNORA48.9-201ENST00000516419 ZNF438Q7Z4V0 828 aa11.19□□□□□ -0.62
SNORA48.9-201ENST00000516419 NLRP13Q86W25 1043 aa11.19□□□□□ -0.62
SNORA48.9-201ENST00000516419 PNMA5Q96PV4 448 aa11.19□□□□□ -0.62
SNORA48.9-201ENST00000516419 SLC30A3Q99726 388 aa11.19□□□□□ -0.62
SNORA48.9-201ENST00000516419 MBIPQ9NS73 344 aa11.19□□□□□ -0.62
SNORA48.9-201ENST00000516419 ANKRD33BA6NCL7 494 aa11.18□□□□□ -0.62
SNORA48.9-201ENST00000516419 A6NHS1 94 aa11.18□□□□□ -0.62
SNORA48.9-201ENST00000516419 IGHA2P01877 340 aa11.18□□□□□ -0.62
SNORA48.9-201ENST00000516419 BMP4P12644 408 aa11.18□□□□□ -0.62
SNORA48.9-201ENST00000516419 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
SNORA48.9-201ENST00000516419 NSFL1CQ9UNZ2 370 aaKnown RBP11.18□□□□□ -0.62
SNORA48.9-201ENST00000516419 C2CD2LO14523 706 aa11.17□□□□□ -0.62
SNORA48.9-201ENST00000516419 SASH3O75995 380 aa11.17□□□□□ -0.62
SNORA48.9-201ENST00000516419 ALKBH8Q96BT7 664 aaKnown RBP11.17□□□□□ -0.62
SNORA48.9-201ENST00000516419 ELP3Q9H9T3 547 aa11.17□□□□□ -0.62
SNORA48.9-201ENST00000516419 PRR12Q9ULL5 1215 aa11.17□□□□□ -0.62
SNORA48.9-201ENST00000516419 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.17□□□□□ -0.62
SNORA48.9-201ENST00000516419 GPR182O15218 404 aa11.16□□□□□ -0.62
SNORA48.9-201ENST00000516419 TREHO43280 583 aa11.16□□□□□ -0.62
SNORA48.9-201ENST00000516419 NEFLP07196 543 aa11.16□□□□□ -0.62
SNORA48.9-201ENST00000516419 KRT25Q7Z3Z0 450 aa11.16□□□□□ -0.62
SNORA48.9-201ENST00000516419 BHMTQ93088 406 aa11.16□□□□□ -0.62
SNORA48.9-201ENST00000516419 NFKB1P19838 968 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms