RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 RBM46Q8TBY0 533 aaKnown RBP25.41■■□□□ 1.66
DDR1-280ENST00000515881 RPGRQ92834 1020 aaKnown RBP25.41■■□□□ 1.66
DDR1-280ENST00000515881 UTP14AQ9BVJ6 771 aaKnown RBP25.41■■□□□ 1.66
DDR1-280ENST00000515881 DBF4Q9UBU7 674 aaPredicted RBP25.41■■□□□ 1.66
DDR1-280ENST00000515881 ANP32CO43423 234 aa25.4■■□□□ 1.66
DDR1-280ENST00000515881 HOXA10P31260 410 aaPredicted RBP25.4■■□□□ 1.66
DDR1-280ENST00000515881 OLFM4Q6UX06 510 aa25.4■■□□□ 1.66
DDR1-280ENST00000515881 CACNA1SQ13698 1873 aa25.39■■□□□ 1.66
DDR1-280ENST00000515881 FKBP4Q02790 459 aaKnown RBP eCLIP25.39■■□□□ 1.66
DDR1-280ENST00000515881 RTKN2Q8IZC4 609 aa25.39■■□□□ 1.66
DDR1-280ENST00000515881 RNF123Q5XPI4 1314 aa25.38■■□□□ 1.65
DDR1-280ENST00000515881 TCIRG1Q13488 830 aa25.38■■□□□ 1.65
DDR1-280ENST00000515881 DPY19L2Q6NUT2 758 aa25.38■■□□□ 1.65
DDR1-280ENST00000515881 C3orf67Q6ZVT6 689 aa25.38■■□□□ 1.65
DDR1-280ENST00000515881 NLRP10Q86W26 655 aa25.38■■□□□ 1.65
DDR1-280ENST00000515881 SLC10A5Q5PT55 438 aa25.37■■□□□ 1.65
DDR1-280ENST00000515881 PLBD2Q8NHP8 589 aa25.37■■□□□ 1.65
DDR1-280ENST00000515881 MRS2Q9HD23 443 aa25.37■■□□□ 1.65
DDR1-280ENST00000515881 HYPKQ9NX55 129 aa25.37■■□□□ 1.65
DDR1-280ENST00000515881 VEGFAP15692 232 aaPredicted RBP25.36■■□□□ 1.65
DDR1-280ENST00000515881 RBM17Q96I25 401 aaKnown RBP25.36■■□□□ 1.65
DDR1-280ENST00000515881 NLRP3Q96P20 1036 aa25.36■■□□□ 1.65
DDR1-280ENST00000515881 CRAMP1Q96RY5 1269 aa25.36■■□□□ 1.65
DDR1-280ENST00000515881 FSTL1Q12841 308 aa25.35■■□□□ 1.65
DDR1-280ENST00000515881 ANKRD13DQ6ZTN6 518 aa25.35■■□□□ 1.65
DDR1-280ENST00000515881 ZNF277Q9NRM2 450 aaPredicted RBP25.35■■□□□ 1.65
DDR1-280ENST00000515881 ELL2O00472 640 aaPredicted RBP25.34■■□□□ 1.65
DDR1-280ENST00000515881 CC2D2BQ6DHV5 1058 aa25.34■■□□□ 1.65
DDR1-280ENST00000515881 SNED1Q8TER0 1413 aa25.34■■□□□ 1.65
DDR1-280ENST00000515881 CCDC27Q2M243 656 aa25.33■■□□□ 1.65
DDR1-280ENST00000515881 C8orf58Q8NAV2 365 aa25.33■■□□□ 1.65
DDR1-280ENST00000515881 TRMT112Q9UI30 125 aaKnown RBP25.33■■□□□ 1.65
DDR1-280ENST00000515881 CCDC88AQ3V6T2 1871 aa25.32■■□□□ 1.64
DDR1-280ENST00000515881 APLP1P51693 650 aa25.32■■□□□ 1.64
DDR1-280ENST00000515881 SH3TC1Q8TE82 1336 aa25.32■■□□□ 1.64
DDR1-280ENST00000515881 ANKRD36CQ5JPF3 1778 aa25.31■■□□□ 1.64
DDR1-280ENST00000515881 POTECB2RU33 542 aa25.31■■□□□ 1.64
DDR1-280ENST00000515881 PPEF1O14829 653 aaPredicted RBP25.31■■□□□ 1.64
DDR1-280ENST00000515881 HCLS1P14317 486 aaPredicted RBP25.31■■□□□ 1.64
DDR1-280ENST00000515881 SYNE4Q8N205 404 aa25.31■■□□□ 1.64
DDR1-280ENST00000515881 PSMD1Q99460 953 aa25.31■■□□□ 1.64
DDR1-280ENST00000515881 DICER1Q9UPY3 1922 aaKnown RBP25.3■■□□□ 1.64
DDR1-280ENST00000515881 WDR90Q96KV7 1748 aa25.3■■□□□ 1.64
DDR1-280ENST00000515881 IARSP41252 1262 aaKnown RBP25.3■■□□□ 1.64
DDR1-280ENST00000515881 WWC1Q8IX03 1113 aa25.3■■□□□ 1.64
DDR1-280ENST00000515881 SMC1BQ8NDV3 1235 aa25.3■■□□□ 1.64
DDR1-280ENST00000515881 ISCA1Q9BUE6 129 aa25.3■■□□□ 1.64
DDR1-280ENST00000515881 DDNO94850 711 aaPredicted RBP25.29■■□□□ 1.64
DDR1-280ENST00000515881 GRIPAP1Q4V328 841 aa25.29■■□□□ 1.64
DDR1-280ENST00000515881 NCBP3Q53F19 620 aaKnown RBP25.28■■□□□ 1.64
DDR1-280ENST00000515881 TSR2Q969E8 191 aaKnown RBP25.28■■□□□ 1.64
DDR1-280ENST00000515881 ATP5J2-PTCD1G3V325 749 aa25.27■■□□□ 1.64
DDR1-280ENST00000515881 TCERG1O14776 1098 aaKnown RBP25.27■■□□□ 1.64
DDR1-280ENST00000515881 GOLGA2Q08379 1002 aa25.27■■□□□ 1.64
DDR1-280ENST00000515881 SLC51AQ86UW1 340 aa25.27■■□□□ 1.64
DDR1-280ENST00000515881 ZNF428Q96B54 188 aa25.27■■□□□ 1.64
DDR1-280ENST00000515881 CHMP4AQ9BY43 222 aa25.27■■□□□ 1.64
DDR1-280ENST00000515881 PHAXQ9H814 394 aaKnown RBP25.27■■□□□ 1.64
DDR1-280ENST00000515881 ABCC4O15439 1325 aa25.27■■□□□ 1.64
DDR1-280ENST00000515881 CCDC30Q5VVM6 783 aa25.26■■□□□ 1.63
DDR1-280ENST00000515881 RIC3Q7Z5B4 369 aa25.26■■□□□ 1.63
DDR1-280ENST00000515881 TSPYL6Q8N831 410 aa25.26■■□□□ 1.63
DDR1-280ENST00000515881 TRIM28Q13263 835 aaKnown RBP25.25■■□□□ 1.63
DDR1-280ENST00000515881 ATP6V0A2Q9Y487 856 aa25.25■■□□□ 1.63
DDR1-280ENST00000515881 IL16Q14005 1332 aa25.25■■□□□ 1.63
DDR1-280ENST00000515881 ZNF541Q9H0D2 1346 aa25.25■■□□□ 1.63
DDR1-280ENST00000515881 L3MBTL3Q96JM7 780 aaPredicted RBP25.24■■□□□ 1.63
DDR1-280ENST00000515881 TMX4Q9H1E5 349 aaPredicted RBP25.24■■□□□ 1.63
DDR1-280ENST00000515881 FZD9O00144 591 aa25.23■■□□□ 1.63
DDR1-280ENST00000515881 BBOX1O75936 387 aa25.23■■□□□ 1.63
DDR1-280ENST00000515881 DDX46Q7L014 1031 aaKnown RBP25.23■■□□□ 1.63
DDR1-280ENST00000515881 JDP2Q8WYK2 163 aa25.23■■□□□ 1.63
DDR1-280ENST00000515881 FAM89AQ96GI7 184 aa25.23■■□□□ 1.63
DDR1-280ENST00000515881 IQCA1LA6NCM1 817 aa25.21■■□□□ 1.63
DDR1-280ENST00000515881 CEP350Q5VT06 3117 aa25.2■■□□□ 1.63
DDR1-280ENST00000515881 DDX58O95786 925 aaKnown RBP25.2■■□□□ 1.62
DDR1-280ENST00000515881 GRAPQ13588 217 aa25.2■■□□□ 1.62
DDR1-280ENST00000515881 SP8Q8IXZ3 490 aa25.2■■□□□ 1.62
DDR1-280ENST00000515881 GRAPLQ8TC17 118 aaPredicted RBP25.2■■□□□ 1.62
DDR1-280ENST00000515881 COL4A5P29400 1685 aa25.2■■□□□ 1.62
DDR1-280ENST00000515881 TWISTNBQ3B726 338 aaPredicted RBP25.19■■□□□ 1.62
DDR1-280ENST00000515881 RTL5Q5HYW3 569 aaPredicted RBP25.19■■□□□ 1.62
DDR1-280ENST00000515881 LARGE2Q8N3Y3 721 aa25.19■■□□□ 1.62
DDR1-280ENST00000515881 MYD88Q99836 296 aa25.19■■□□□ 1.62
DDR1-280ENST00000515881 LAMB2P55268 1798 aa25.18■■□□□ 1.62
DDR1-280ENST00000515881 SF3B3Q15393 1217 aaKnown RBP25.18■■□□□ 1.62
DDR1-280ENST00000515881 DNAJC5GQ8N7S2 189 aa25.18■■□□□ 1.62
DDR1-280ENST00000515881 STK31Q9BXU1 1019 aa25.18■■□□□ 1.62
DDR1-280ENST00000515881 SALL2Q9Y467 1007 aaPredicted RBP25.18■■□□□ 1.62
DDR1-280ENST00000515881 IRS4O14654 1257 aaPredicted RBP25.17■■□□□ 1.62
DDR1-280ENST00000515881 HTRA3P83110 453 aa25.17■■□□□ 1.62
DDR1-280ENST00000515881 WDR63Q8IWG1 891 aa25.17■■□□□ 1.62
DDR1-280ENST00000515881 GPC2Q8N158 579 aa25.17■■□□□ 1.62
DDR1-280ENST00000515881 ZBTB38Q8NAP3 1195 aaPredicted RBP25.17■■□□□ 1.62
DDR1-280ENST00000515881 RTFDC1Q9BY42 306 aaPredicted RBP25.17■■□□□ 1.62
DDR1-280ENST00000515881 TAF1DQ9H5J8 278 aaPredicted RBP25.17■■□□□ 1.62
DDR1-280ENST00000515881 FANCIQ9NVI1 1328 aa25.16■■□□□ 1.62
DDR1-280ENST00000515881 POTEIP0CG38 1075 aa25.16■■□□□ 1.62
DDR1-280ENST00000515881 POTEJP0CG39 1038 aa25.16■■□□□ 1.62
DDR1-280ENST00000515881 EIF6P56537 245 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms