RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 ALDH1B1P30837 517 aa23.05■■□□□ 1.28
SFXN1-212ENST00000515791 CCDC93Q567U6 631 aa23.05■■□□□ 1.28
SFXN1-212ENST00000515791 IFT57Q9NWB7 429 aa23.05■■□□□ 1.28
SFXN1-212ENST00000515791 WDR90Q96KV7 1748 aa23.05■■□□□ 1.28
SFXN1-212ENST00000515791 AIMP1Q12904 312 aaKnown RBP23.04■■□□□ 1.28
SFXN1-212ENST00000515791 SLC10A5Q5PT55 438 aa23.04■■□□□ 1.28
SFXN1-212ENST00000515791 HDGFL1Q5TGJ6 251 aa23.04■■□□□ 1.28
SFXN1-212ENST00000515791 PPP1R42Q7Z4L9 355 aa23.04■■□□□ 1.28
SFXN1-212ENST00000515791 TCIRG1Q13488 830 aa23.03■■□□□ 1.28
SFXN1-212ENST00000515791 DUSP27Q5VZP5 1158 aa23.03■■□□□ 1.28
SFXN1-212ENST00000515791 NLRP10Q86W26 655 aa23.03■■□□□ 1.28
SFXN1-212ENST00000515791 FKBP4Q02790 459 aaKnown RBP eCLIP23.02■■□□□ 1.28
SFXN1-212ENST00000515791 GNAI1P63096 354 aa23.01■■□□□ 1.27
SFXN1-212ENST00000515791 SLC51AQ86UW1 340 aa23.01■■□□□ 1.27
SFXN1-212ENST00000515791 UTP14AQ9BVJ6 771 aaKnown RBP23.01■■□□□ 1.27
SFXN1-212ENST00000515791 DBF4Q9UBU7 674 aaPredicted RBP23.01■■□□□ 1.27
SFXN1-212ENST00000515791 LAMB2P55268 1798 aa23■■□□□ 1.27
SFXN1-212ENST00000515791 HSP90AB3PQ58FF7 597 aa23■■□□□ 1.27
SFXN1-212ENST00000515791 RNF123Q5XPI4 1314 aa23■■□□□ 1.27
SFXN1-212ENST00000515791 VEGFAP15692 232 aaPredicted RBP22.99■■□□□ 1.27
SFXN1-212ENST00000515791 FSTL1Q12841 308 aa22.99■■□□□ 1.27
SFXN1-212ENST00000515791 RTKN2Q8IZC4 609 aa22.99■■□□□ 1.27
SFXN1-212ENST00000515791 SYNE4Q8N205 404 aa22.99■■□□□ 1.27
SFXN1-212ENST00000515791 PLBD2Q8NHP8 589 aa22.99■■□□□ 1.27
SFXN1-212ENST00000515791 CRAMP1Q96RY5 1269 aa22.99■■□□□ 1.27
SFXN1-212ENST00000515791 CALD1Q05682 793 aaKnown RBP22.98■■□□□ 1.27
SFXN1-212ENST00000515791 CCDC27Q2M243 656 aa22.98■■□□□ 1.27
SFXN1-212ENST00000515791 C8orf58Q8NAV2 365 aa22.98■■□□□ 1.27
SFXN1-212ENST00000515791 ZNF277Q9NRM2 450 aaPredicted RBP22.98■■□□□ 1.27
SFXN1-212ENST00000515791 DPY19L2Q6NUT2 758 aa22.97■■□□□ 1.27
SFXN1-212ENST00000515791 ANKRD13DQ6ZTN6 518 aa22.97■■□□□ 1.27
SFXN1-212ENST00000515791 C16orf71Q8IYS4 520 aaPredicted RBP22.97■■□□□ 1.27
SFXN1-212ENST00000515791 RPGRQ92834 1020 aaKnown RBP22.97■■□□□ 1.27
SFXN1-212ENST00000515791 NLRP3Q96P20 1036 aa22.97■■□□□ 1.27
SFXN1-212ENST00000515791 ISCA1Q9BUE6 129 aa22.97■■□□□ 1.27
SFXN1-212ENST00000515791 HYPKQ9NX55 129 aa22.97■■□□□ 1.27
SFXN1-212ENST00000515791 COL4A5P29400 1685 aa22.97■■□□□ 1.27
SFXN1-212ENST00000515791 DDNO94850 711 aaPredicted RBP22.96■■□□□ 1.27
SFXN1-212ENST00000515791 RBM17Q96I25 401 aaKnown RBP22.96■■□□□ 1.27
SFXN1-212ENST00000515791 PSMD1Q99460 953 aa22.96■■□□□ 1.27
SFXN1-212ENST00000515791 ELL2O00472 640 aaPredicted RBP22.95■■□□□ 1.26
SFXN1-212ENST00000515791 APLP1P51693 650 aa22.95■■□□□ 1.26
SFXN1-212ENST00000515791 NCBP3Q53F19 620 aaKnown RBP22.95■■□□□ 1.26
SFXN1-212ENST00000515791 CC2D2BQ6DHV5 1058 aa22.95■■□□□ 1.26
SFXN1-212ENST00000515791 DDX60Q8IY21 1712 aaKnown RBP22.95■■□□□ 1.26
SFXN1-212ENST00000515791 HCLS1P14317 486 aaPredicted RBP22.94■■□□□ 1.26
SFXN1-212ENST00000515791 WWC1Q8IX03 1113 aa22.94■■□□□ 1.26
SFXN1-212ENST00000515791 DNAJC5GQ8N7S2 189 aa22.94■■□□□ 1.26
SFXN1-212ENST00000515791 PHAXQ9H814 394 aaKnown RBP22.94■■□□□ 1.26
SFXN1-212ENST00000515791 ABCC4O15439 1325 aa22.93■■□□□ 1.26
SFXN1-212ENST00000515791 SH3TC1Q8TE82 1336 aa22.93■■□□□ 1.26
SFXN1-212ENST00000515791 IARSP41252 1262 aaKnown RBP22.93■■□□□ 1.26
SFXN1-212ENST00000515791 TSPYL6Q8N831 410 aa22.93■■□□□ 1.26
SFXN1-212ENST00000515791 MRS2Q9HD23 443 aa22.93■■□□□ 1.26
SFXN1-212ENST00000515791 TRMT112Q9UI30 125 aaKnown RBP22.93■■□□□ 1.26
SFXN1-212ENST00000515791 ZNF541Q9H0D2 1346 aa22.92■■□□□ 1.26
SFXN1-212ENST00000515791 FZD9O00144 591 aa22.92■■□□□ 1.26
SFXN1-212ENST00000515791 PPEF1O14829 653 aaPredicted RBP22.92■■□□□ 1.26
SFXN1-212ENST00000515791 ANP32CO43423 234 aa22.92■■□□□ 1.26
SFXN1-212ENST00000515791 TRIM28Q13263 835 aaKnown RBP22.92■■□□□ 1.26
SFXN1-212ENST00000515791 SMC1BQ8NDV3 1235 aa22.92■■□□□ 1.26
SFXN1-212ENST00000515791 L3MBTL3Q96JM7 780 aaPredicted RBP22.92■■□□□ 1.26
SFXN1-212ENST00000515791 ATP5J2-PTCD1G3V325 749 aa22.9■■□□□ 1.26
SFXN1-212ENST00000515791 TSR2Q969E8 191 aaKnown RBP22.9■■□□□ 1.26
SFXN1-212ENST00000515791 ZNF428Q96B54 188 aa22.9■■□□□ 1.26
SFXN1-212ENST00000515791 ATP6V0A2Q9Y487 856 aa22.9■■□□□ 1.26
SFXN1-212ENST00000515791 TAF1P21675 1872 aa22.9■■□□□ 1.26
SFXN1-212ENST00000515791 GRIPAP1Q4V328 841 aa22.89■■□□□ 1.25
SFXN1-212ENST00000515791 SCN4AP35499 1836 aa22.89■■□□□ 1.25
SFXN1-212ENST00000515791 COL4A1P02462 1669 aa22.88■■□□□ 1.25
SFXN1-212ENST00000515791 TCERG1O14776 1098 aaKnown RBP22.88■■□□□ 1.25
SFXN1-212ENST00000515791 HTRA3P83110 453 aa22.88■■□□□ 1.25
SFXN1-212ENST00000515791 FAM89AQ96GI7 184 aa22.88■■□□□ 1.25
SFXN1-212ENST00000515791 IL16Q14005 1332 aa22.87■■□□□ 1.25
SFXN1-212ENST00000515791 POTEIP0CG38 1075 aa22.87■■□□□ 1.25
SFXN1-212ENST00000515791 POTEJP0CG39 1038 aa22.87■■□□□ 1.25
SFXN1-212ENST00000515791 BBOX1O75936 387 aa22.86■■□□□ 1.25
SFXN1-212ENST00000515791 SF3B3Q15393 1217 aaKnown RBP22.86■■□□□ 1.25
SFXN1-212ENST00000515791 RTFDC1Q9BY42 306 aaPredicted RBP22.86■■□□□ 1.25
SFXN1-212ENST00000515791 LRRC37AA6NMS7 1700 aa22.85■■□□□ 1.25
SFXN1-212ENST00000515791 GRAPQ13588 217 aa22.85■■□□□ 1.25
SFXN1-212ENST00000515791 CCDC30Q5VVM6 783 aa22.85■■□□□ 1.25
SFXN1-212ENST00000515791 SP8Q8IXZ3 490 aa22.85■■□□□ 1.25
SFXN1-212ENST00000515791 GRAPLQ8TC17 118 aaPredicted RBP22.85■■□□□ 1.25
SFXN1-212ENST00000515791 ADAMTSL1Q8N6G6 1762 aa22.84■■□□□ 1.25
SFXN1-212ENST00000515791 GOLGA2Q08379 1002 aa22.84■■□□□ 1.25
SFXN1-212ENST00000515791 RIC3Q7Z5B4 369 aa22.84■■□□□ 1.25
SFXN1-212ENST00000515791 TAF1DQ9H5J8 278 aaPredicted RBP22.84■■□□□ 1.25
SFXN1-212ENST00000515791 DDX46Q7L014 1031 aaKnown RBP22.83■■□□□ 1.25
SFXN1-212ENST00000515791 DUOX1Q9NRD9 1551 aa22.83■■□□□ 1.25
SFXN1-212ENST00000515791 GPC2Q8N158 579 aa22.82■■□□□ 1.24
SFXN1-212ENST00000515791 ZBTB38Q8NAP3 1195 aaPredicted RBP22.82■■□□□ 1.24
SFXN1-212ENST00000515791 JDP2Q8WYK2 163 aa22.82■■□□□ 1.24
SFXN1-212ENST00000515791 MYD88Q99836 296 aa22.82■■□□□ 1.24
SFXN1-212ENST00000515791 LTBP1Q14766 1721 aa22.82■■□□□ 1.24
SFXN1-212ENST00000515791 IQCA1LA6NCM1 817 aa22.81■■□□□ 1.24
SFXN1-212ENST00000515791 IRS4O14654 1257 aaPredicted RBP22.81■■□□□ 1.24
SFXN1-212ENST00000515791 TWISTNBQ3B726 338 aaPredicted RBP22.81■■□□□ 1.24
SFXN1-212ENST00000515791 RTL5Q5HYW3 569 aaPredicted RBP22.81■■□□□ 1.24
SFXN1-212ENST00000515791 LARGE2Q8N3Y3 721 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms