RNA–Protein interactions for RNA: ENST00000515725.5

COPG1-210, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-210ENST00000515725 LRRC24Q50LG9 513 aa11.13□□□□□ -0.63
COPG1-210ENST00000515725 SMC5Q8IY18 1101 aa11.13□□□□□ -0.63
COPG1-210ENST00000515725 HDAC5Q9UQL6 1122 aa11.13□□□□□ -0.63
COPG1-210ENST00000515725 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
COPG1-210ENST00000515725 BRPF1P55201 1214 aaPredicted RBP11.13□□□□□ -0.63
COPG1-210ENST00000515725 TFCP2Q12800 502 aa11.13□□□□□ -0.63
COPG1-210ENST00000515725 METTL24Q5JXM2 366 aa11.13□□□□□ -0.63
COPG1-210ENST00000515725 SEC31BQ9NQW1 1179 aa11.12□□□□□ -0.63
COPG1-210ENST00000515725 MAP3K15Q6ZN16 1313 aa11.12□□□□□ -0.63
COPG1-210ENST00000515725 SUSD4Q5VX71 490 aa11.12□□□□□ -0.63
COPG1-210ENST00000515725 AMIGO3Q86WK7 504 aa11.12□□□□□ -0.63
COPG1-210ENST00000515725 BACH2Q9BYV9 841 aa11.12□□□□□ -0.63
COPG1-210ENST00000515725 LRRC4BQ9NT99 713 aa11.12□□□□□ -0.63
COPG1-210ENST00000515725 MX1P20591 662 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
COPG1-210ENST00000515725 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
COPG1-210ENST00000515725 GREM2Q9H772 168 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 ANO2Q9NQ90 1003 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 ZNF652Q9Y2D9 606 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 TXNRD1Q16881 649 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 TPRNQ4KMQ1 711 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 INTS5Q6P9B9 1019 aaKnown RBP11.11□□□□□ -0.63
COPG1-210ENST00000515725 STK11IPQ8N1F8 1099 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 FBXW7Q969H0 707 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 KIF1BPQ96EK5 621 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 UTP14AQ9BVJ6 771 aaKnown RBP11.11□□□□□ -0.63
COPG1-210ENST00000515725 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
COPG1-210ENST00000515725 CEP126Q9P2H0 1117 aa11.11□□□□□ -0.63
COPG1-210ENST00000515725 BCL9O00512 1426 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 ITGA6P23229 1130 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 IL6STP40189 918 aaPredicted RBP11.1□□□□□ -0.63
COPG1-210ENST00000515725 NBR1Q14596 966 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 HSP90AB3PQ58FF7 597 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 CWC27Q6UX04 472 aaKnown RBP11.1□□□□□ -0.63
COPG1-210ENST00000515725 NLRP10Q86W26 655 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 AAMPQ13685 434 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 TBC1D9BQ66K14 1250 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 CASC1Q6TDU7 716 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 PLEKHM2Q8IWE5 1019 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 CCDC191Q8NCU4 936 aa11.1□□□□□ -0.63
COPG1-210ENST00000515725 SLKQ9H2G2 1235 aaPredicted RBP11.1□□□□□ -0.63
COPG1-210ENST00000515725 VPS37DQ86XT2 251 aa11.09□□□□□ -0.63
COPG1-210ENST00000515725 KAZALD1Q96I82 304 aa11.09□□□□□ -0.63
COPG1-210ENST00000515725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.09□□□□□ -0.63
COPG1-210ENST00000515725 RGPD1P0DJD0 1748 aa11.09□□□□□ -0.63
COPG1-210ENST00000515725 ERFEQ4G0M1 354 aa11.09□□□□□ -0.63
COPG1-210ENST00000515725 TNS2Q63HR2 1409 aa11.09□□□□□ -0.63
COPG1-210ENST00000515725 DDX46Q7L014 1031 aaKnown RBP11.09□□□□□ -0.63
COPG1-210ENST00000515725 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
COPG1-210ENST00000515725 PDE1AP54750 535 aa11.09□□□□□ -0.63
COPG1-210ENST00000515725 GPATCH3Q96I76 525 aa11.09□□□□□ -0.63
COPG1-210ENST00000515725 FSD1Q9BTV5 496 aa11.09□□□□□ -0.63
COPG1-210ENST00000515725 RGS12O14924 1447 aa11.08□□□□□ -0.64
COPG1-210ENST00000515725 SH3TC1Q8TE82 1336 aa11.08□□□□□ -0.64
COPG1-210ENST00000515725 DTNBO60941 627 aa11.08□□□□□ -0.64
COPG1-210ENST00000515725 SDSP20132 328 aa11.08□□□□□ -0.64
COPG1-210ENST00000515725 EZH2Q15910 746 aaKnown RBP11.08□□□□□ -0.64
COPG1-210ENST00000515725 HSP90AB4PQ58FF6 505 aa11.08□□□□□ -0.64
COPG1-210ENST00000515725 DBNDD2Q9BQY9 259 aa11.08□□□□□ -0.64
COPG1-210ENST00000515725 ANKRD18BA2A2Z9 1011 aa11.08□□□□□ -0.64
COPG1-210ENST00000515725 EIF5P55010 431 aaKnown RBP11.08□□□□□ -0.64
COPG1-210ENST00000515725 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
COPG1-210ENST00000515725 EAF2Q96CJ1 260 aaPredicted RBP11.08□□□□□ -0.64
COPG1-210ENST00000515725 NAP1L2Q9ULW6 460 aaPredicted RBP11.08□□□□□ -0.64
COPG1-210ENST00000515725 SLIT2O94813 1529 aa11.08□□□□□ -0.64
COPG1-210ENST00000515725 FBXO41Q8TF61 875 aa11.07□□□□□ -0.64
COPG1-210ENST00000515725 DIAPH3Q9NSV4 1193 aa11.07□□□□□ -0.64
COPG1-210ENST00000515725 AHDC1Q5TGY3 1603 aaPredicted RBP11.07□□□□□ -0.64
COPG1-210ENST00000515725 SLFNL1Q499Z3 407 aa11.07□□□□□ -0.64
COPG1-210ENST00000515725 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
COPG1-210ENST00000515725 NHSL1Q5SYE7 1610 aa11.07□□□□□ -0.64
COPG1-210ENST00000515725 SSH3Q8TE77 659 aa11.07□□□□□ -0.64
COPG1-210ENST00000515725 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.643e-6■■■□□ 18.9
COPG1-210ENST00000515725 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
COPG1-210ENST00000515725 WASHC4Q2M389 1173 aa11.06□□□□□ -0.64
COPG1-210ENST00000515725 TBC1D9Q6ZT07 1266 aa11.06□□□□□ -0.64
COPG1-210ENST00000515725 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
COPG1-210ENST00000515725 ABCF2Q9UG63 623 aa11.06□□□□□ -0.64
COPG1-210ENST00000515725 GOLIM4O00461 696 aa11.06□□□□□ -0.64
COPG1-210ENST00000515725 CHGBP05060 677 aa11.06□□□□□ -0.64
COPG1-210ENST00000515725 GSPT1P15170 499 aaKnown RBP11.06□□□□□ -0.64
COPG1-210ENST00000515725 IGHMBP2P38935 993 aaKnown RBP11.06□□□□□ -0.64
COPG1-210ENST00000515725 CHAF1AQ13111 956 aaPredicted RBP11.06□□□□□ -0.64
COPG1-210ENST00000515725 PI16Q6UXB8 463 aa11.06□□□□□ -0.64
COPG1-210ENST00000515725 ZBTB38Q8NAP3 1195 aaPredicted RBP11.06□□□□□ -0.64
COPG1-210ENST00000515725 GPR101Q96P66 508 aaPredicted RBP11.06□□□□□ -0.64
COPG1-210ENST00000515725 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
COPG1-210ENST00000515725 COL15A1P39059 1388 aa11.06□□□□□ -0.64
COPG1-210ENST00000515725 WTIPA6NIX2 430 aaPredicted RBP11.05□□□□□ -0.64
COPG1-210ENST00000515725 SASH1O94885 1247 aa11.05□□□□□ -0.64
COPG1-210ENST00000515725 TPTE2Q6XPS3 522 aa11.05□□□□□ -0.64
COPG1-210ENST00000515725 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
COPG1-210ENST00000515725 CHMP4CQ96CF2 233 aa11.05□□□□□ -0.64
COPG1-210ENST00000515725 NLRP3Q96P20 1036 aa11.05□□□□□ -0.64
COPG1-210ENST00000515725 COL18A1P39060 1754 aa11.05□□□□□ -0.64
COPG1-210ENST00000515725 PTPN12Q05209 780 aaKnown RBP11.05□□□□□ -0.64
COPG1-210ENST00000515725 SLC4A8Q2Y0W8 1093 aa11.05□□□□□ -0.64
COPG1-210ENST00000515725 TTC39AQ5SRH9 613 aa11.05□□□□□ -0.64
COPG1-210ENST00000515725 LRP10Q7Z4F1 713 aa11.05□□□□□ -0.64
COPG1-210ENST00000515725 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms