RNA–Protein interactions for RNA: ENST00000515332.5

SGMS2-209, Transcript of sphingomyelin synthase 2, human

TSL 3

Gene SGMS2, Length 498 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGMS2-209	ENST00000515332	MCM10	Q7L590	875 aa		32.57	■■■□□ 2.8
SGMS2-209	ENST00000515332	RSPH6A	Q9H0K4	717 aa		32.57	■■■□□ 2.8
SGMS2-209	ENST00000515332	ABCC12	Q96J65	1359 aa		32.57	■■■□□ 2.8
SGMS2-209	ENST00000515332	SCNN1D	P51172	638 aa		32.56	■■■□□ 2.8
SGMS2-209	ENST00000515332	GPR101	Q96P66	508 aa	Predicted RBP	32.56	■■■□□ 2.8
SGMS2-209	ENST00000515332	MLLT1	Q03111	559 aa	Predicted RBP	32.55	■■■□□ 2.8
SGMS2-209	ENST00000515332	CRY2	Q49AN0	593 aa		32.55	■■■□□ 2.8
SGMS2-209	ENST00000515332	NUTM1	Q86Y26	1132 aa		32.55	■■■□□ 2.8
SGMS2-209	ENST00000515332	TRAF5	O00463	557 aa		32.54	■■■□□ 2.8
SGMS2-209	ENST00000515332	CST9	Q5W186	159 aa		32.54	■■■□□ 2.8
SGMS2-209	ENST00000515332	CC2D2B	Q6DHV5	1058 aa		32.53	■■■□□ 2.8
SGMS2-209	ENST00000515332	RTF1	Q92541	710 aa	Known RBP	32.53	■■■□□ 2.8
SGMS2-209	ENST00000515332	TSKS	Q9UJT2	592 aa		32.53	■■■□□ 2.8
SGMS2-209	ENST00000515332	SLC51A	Q86UW1	340 aa		32.52	■■■□□ 2.8
SGMS2-209	ENST00000515332	LARGE2	Q8N3Y3	721 aa		32.52	■■■□□ 2.8
SGMS2-209	ENST00000515332	DCTN1	Q14203	1278 aa		32.51	■■■□□ 2.79
SGMS2-209	ENST00000515332	NYX	Q9GZU5	481 aa		32.51	■■■□□ 2.79
SGMS2-209	ENST00000515332	NPC1L1	Q9UHC9	1359 aa		32.5	■■■□□ 2.79
SGMS2-209	ENST00000515332	USP50	Q70EL3	339 aa	Predicted RBP	32.5	■■■□□ 2.79
SGMS2-209	ENST00000515332	NGEF	Q8N5V2	710 aa		32.5	■■■□□ 2.79
SGMS2-209	ENST00000515332	RPGR	Q92834	1020 aa	Known RBP	32.5	■■■□□ 2.79
SGMS2-209	ENST00000515332	TLL2	Q9Y6L7	1015 aa		32.5	■■■□□ 2.79
SGMS2-209	ENST00000515332	TRPM7	Q96QT4	1865 aa		32.49	■■■□□ 2.79
SGMS2-209	ENST00000515332	AOC2	O75106	756 aa		32.49	■■■□□ 2.79
SGMS2-209	ENST00000515332	RGS19	P49795	217 aa		32.49	■■■□□ 2.79
SGMS2-209	ENST00000515332	TCERG1	O14776	1098 aa	Known RBP	32.47	■■■□□ 2.79
SGMS2-209	ENST00000515332	HOXA10	P31260	410 aa	Predicted RBP	32.46	■■■□□ 2.79
SGMS2-209	ENST00000515332	NIM1K	Q8IY84	436 aa		32.45	■■■□□ 2.79
SGMS2-209	ENST00000515332	CFAP53	Q96M91	514 aa		32.45	■■■□□ 2.79
SGMS2-209	ENST00000515332	MAP2K2	P36507	400 aa		32.44	■■■□□ 2.78
SGMS2-209	ENST00000515332	GRIPAP1	Q4V328	841 aa		32.44	■■■□□ 2.78
SGMS2-209	ENST00000515332	MIS18A	Q9NYP9	233 aa		32.44	■■■□□ 2.78
SGMS2-209	ENST00000515332	PPEF1	O14829	653 aa	Predicted RBP	32.43	■■■□□ 2.78
SGMS2-209	ENST00000515332	GPT	P24298	496 aa		32.43	■■■□□ 2.78
SGMS2-209	ENST00000515332	ERVV-1	B6SEH8	477 aa		32.42	■■■□□ 2.78
SGMS2-209	ENST00000515332	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.42	■■■□□ 2.78
SGMS2-209	ENST00000515332	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.42	■■■□□ 2.78
SGMS2-209	ENST00000515332	RBM17	Q96I25	401 aa	Known RBP	32.42	■■■□□ 2.78
SGMS2-209	ENST00000515332	CFAP44	Q96MT7	982 aa		32.42	■■■□□ 2.78
SGMS2-209	ENST00000515332	MAP3K15	Q6ZN16	1313 aa		32.42	■■■□□ 2.78
SGMS2-209	ENST00000515332	LAMB4	A4D0S4	1761 aa		32.42	■■■□□ 2.78
SGMS2-209	ENST00000515332	NUP98	P52948	1817 aa		32.42	■■■□□ 2.78
SGMS2-209	ENST00000515332	RIC1	Q4ADV7	1423 aa		32.42	■■■□□ 2.78
SGMS2-209	ENST00000515332	PPIP5K2	O43314	1243 aa		32.41	■■■□□ 2.78
SGMS2-209	ENST00000515332	TAF7	Q15545	349 aa	Predicted RBP	32.41	■■■□□ 2.78
SGMS2-209	ENST00000515332	ADARB2	Q9NS39	739 aa	Known RBP	32.41	■■■□□ 2.78
SGMS2-209	ENST00000515332	NUDC	Q9Y266	331 aa		32.41	■■■□□ 2.78
SGMS2-209	ENST00000515332	UBN2	Q6ZU65	1347 aa		32.41	■■■□□ 2.78
SGMS2-209	ENST00000515332	CELF2	O95319	508 aa	Known RBP	32.4	■■■□□ 2.78
SGMS2-209	ENST00000515332	TTLL7	Q6ZT98	887 aa		32.4	■■■□□ 2.78
SGMS2-209	ENST00000515332	SAPCD2	Q86UD0	394 aa		32.4	■■■□□ 2.78
SGMS2-209	ENST00000515332	CRAMP1	Q96RY5	1269 aa		32.4	■■■□□ 2.78
SGMS2-209	ENST00000515332	MCOLN1	Q9GZU1	580 aa		32.4	■■■□□ 2.78
SGMS2-209	ENST00000515332	GPRC5D	Q9NZD1	345 aa		32.4	■■■□□ 2.78
SGMS2-209	ENST00000515332	AOC3	Q16853	763 aa		32.39	■■■□□ 2.78
SGMS2-209	ENST00000515332	SUSD4	Q5VX71	490 aa		32.39	■■■□□ 2.78
SGMS2-209	ENST00000515332	KIF6	Q6ZMV9	814 aa		32.39	■■■□□ 2.78
SGMS2-209	ENST00000515332	HTATSF1	O43719	755 aa	Known RBP	32.38	■■■□□ 2.77
SGMS2-209	ENST00000515332	C3orf67	Q6ZVT6	689 aa		32.38	■■■□□ 2.77
SGMS2-209	ENST00000515332	RRP7A	Q9Y3A4	280 aa	Known RBP	32.38	■■■□□ 2.77
SGMS2-209	ENST00000515332	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.37	■■■□□ 2.77
SGMS2-209	ENST00000515332	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.37	■■■□□ 2.77
SGMS2-209	ENST00000515332	ZBTB3	Q9H5J0	574 aa		32.37	■■■□□ 2.77
SGMS2-209	ENST00000515332	CA12	O43570	354 aa		32.36	■■■□□ 2.77
SGMS2-209	ENST00000515332	MYL6B	P14649	208 aa		32.35	■■■□□ 2.77
SGMS2-209	ENST00000515332	CXCL9	Q07325	125 aa		32.34	■■■□□ 2.77
SGMS2-209	ENST00000515332	CASP8AP2	Q9UKL3	1982 aa		32.33	■■■□□ 2.77
SGMS2-209	ENST00000515332	NTSR2	O95665	410 aa		32.33	■■■□□ 2.77
SGMS2-209	ENST00000515332	GMPS	P49915	693 aa	Predicted RBP	32.33	■■■□□ 2.77
SGMS2-209	ENST00000515332	ZNF408	Q9H9D4	720 aa		32.33	■■■□□ 2.77
SGMS2-209	ENST00000515332	ZNRF3	Q9ULT6	936 aa		32.33	■■■□□ 2.77
SGMS2-209	ENST00000515332	BRPF1	P55201	1214 aa	Predicted RBP	32.32	■■■□□ 2.76
SGMS2-209	ENST00000515332	ZNF34	Q8IZ26	560 aa		32.32	■■■□□ 2.76
SGMS2-209	ENST00000515332	TMX4	Q9H1E5	349 aa	Predicted RBP	32.32	■■■□□ 2.76
SGMS2-209	ENST00000515332	HHIPL1	Q96JK4	782 aa		32.31	■■■□□ 2.76
SGMS2-209	ENST00000515332	ATP6V0A2	Q9Y487	856 aa		32.31	■■■□□ 2.76
SGMS2-209	ENST00000515332	DGKZ	Q13574	1117 aa		32.3	■■■□□ 2.76
SGMS2-209	ENST00000515332	CIAPIN1	Q6FI81	312 aa		32.3	■■■□□ 2.76
SGMS2-209	ENST00000515332	VPS33B	Q9H267	617 aa		32.3	■■■□□ 2.76
SGMS2-209	ENST00000515332	PGAP2	Q9UHJ9	254 aa		32.29	■■■□□ 2.76
SGMS2-209	ENST00000515332	NLRP3	Q96P20	1036 aa		32.28	■■■□□ 2.76
SGMS2-209	ENST00000515332	KDM3B	Q7LBC6	1761 aa		32.27	■■■□□ 2.76
SGMS2-209	ENST00000515332	HIRA	P54198	1017 aa	Predicted RBP	32.27	■■■□□ 2.76
SGMS2-209	ENST00000515332	EIF4A1	P60842	406 aa	Known RBP	32.27	■■■□□ 2.76
SGMS2-209	ENST00000515332	PPP1R42	Q7Z4L9	355 aa		32.27	■■■□□ 2.76
SGMS2-209	ENST00000515332	SUPT20H	Q8NEM7	779 aa		32.27	■■■□□ 2.76
SGMS2-209	ENST00000515332	PCDH10	Q9P2E7	1040 aa		32.27	■■■□□ 2.76
SGMS2-209	ENST00000515332	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.26	■■■□□ 2.75
SGMS2-209	ENST00000515332	PNISR	Q8TF01	805 aa	Known RBP	32.26	■■■□□ 2.75
SGMS2-209	ENST00000515332	BCL2L13	Q9BXK5	485 aa		32.26	■■■□□ 2.75
SGMS2-209	ENST00000515332	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.26	■■■□□ 2.75
SGMS2-209	ENST00000515332	ABCC4	O15439	1325 aa		32.26	■■■□□ 2.75
SGMS2-209	ENST00000515332	PPP2R1A	P30153	589 aa		32.25	■■■□□ 2.75
SGMS2-209	ENST00000515332	TRPM4	Q8TD43	1214 aa		32.25	■■■□□ 2.75
SGMS2-209	ENST00000515332	ZIC5	Q96T25	663 aa		32.25	■■■□□ 2.75
SGMS2-209	ENST00000515332	RAD17	O75943	681 aa		32.24	■■■□□ 2.75
SGMS2-209	ENST00000515332	DPP8	Q6V1X1	898 aa	Predicted RBP	32.24	■■■□□ 2.75
SGMS2-209	ENST00000515332	ZC3H15	Q8WU90	426 aa	Known RBP	32.24	■■■□□ 2.75
SGMS2-209	ENST00000515332	TNRC18	O15417	2968 aa	Predicted RBP	32.24	■■■□□ 2.75
SGMS2-209	ENST00000515332	CDC37L1	Q7L3B6	337 aa		32.23	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms