RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 RASSF7Q02833 373 aa22.42■■□□□ 1.18
DDR1-277ENST00000515219 CCDC88AQ3V6T2 1871 aa22.41■■□□□ 1.18
DDR1-277ENST00000515219 GOLGA2Q08379 1002 aa22.41■■□□□ 1.18
DDR1-277ENST00000515219 NLRP10Q86W26 655 aa22.41■■□□□ 1.18
DDR1-277ENST00000515219 RNF181Q9P0P0 153 aa22.41■■□□□ 1.18
DDR1-277ENST00000515219 RIC1Q4ADV7 1423 aa22.4■■□□□ 1.18
DDR1-277ENST00000515219 RIC3Q7Z5B4 369 aa22.4■■□□□ 1.18
DDR1-277ENST00000515219 STK31Q9BXU1 1019 aa22.4■■□□□ 1.18
DDR1-277ENST00000515219 GPBP1L1Q9HC44 474 aaPredicted RBP22.4■■□□□ 1.18
DDR1-277ENST00000515219 CCER2I3L3R5 266 aa22.39■■□□□ 1.17
DDR1-277ENST00000515219 TCERG1O14776 1098 aaKnown RBP22.39■■□□□ 1.17
DDR1-277ENST00000515219 RPGRQ92834 1020 aaKnown RBP22.39■■□□□ 1.17
DDR1-277ENST00000515219 ZNF428Q96B54 188 aa22.39■■□□□ 1.17
DDR1-277ENST00000515219 TRMT112Q9UI30 125 aaKnown RBP22.39■■□□□ 1.17
DDR1-277ENST00000515219 FER1L6Q2WGJ9 1857 aa22.39■■□□□ 1.17
DDR1-277ENST00000515219 ATP5J2-PTCD1G3V325 749 aa22.38■■□□□ 1.17
DDR1-277ENST00000515219 ALDH1B1P30837 517 aa22.38■■□□□ 1.17
DDR1-277ENST00000515219 CRY2Q49AN0 593 aa22.38■■□□□ 1.17
DDR1-277ENST00000515219 NLRP3Q96P20 1036 aa22.38■■□□□ 1.17
DDR1-277ENST00000515219 RNF123Q5XPI4 1314 aa22.37■■□□□ 1.17
DDR1-277ENST00000515219 NFKBIEO00221 500 aa22.37■■□□□ 1.17
DDR1-277ENST00000515219 DDX58O95786 925 aaKnown RBP22.37■■□□□ 1.17
DDR1-277ENST00000515219 EXOSC9Q06265 439 aaKnown RBP22.37■■□□□ 1.17
DDR1-277ENST00000515219 SOGA3Q5TF21 947 aa22.37■■□□□ 1.17
DDR1-277ENST00000515219 ISCA1Q9BUE6 129 aa22.37■■□□□ 1.17
DDR1-277ENST00000515219 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
DDR1-277ENST00000515219 SH3TC1Q8TE82 1336 aa22.36■■□□□ 1.17
DDR1-277ENST00000515219 LMNB1P20700 586 aa22.36■■□□□ 1.17
DDR1-277ENST00000515219 SLC10A5Q5PT55 438 aa22.36■■□□□ 1.17
DDR1-277ENST00000515219 MYH16Q9H6N6 1097 aa22.36■■□□□ 1.17
DDR1-277ENST00000515219 LAMB2P55268 1798 aa22.35■■□□□ 1.17
DDR1-277ENST00000515219 C3orf67Q6ZVT6 689 aa22.35■■□□□ 1.17
DDR1-277ENST00000515219 SYNE4Q8N205 404 aa22.35■■□□□ 1.17
DDR1-277ENST00000515219 HCLS1P14317 486 aaPredicted RBP22.34■■□□□ 1.17
DDR1-277ENST00000515219 CCDC93Q567U6 631 aa22.34■■□□□ 1.17
DDR1-277ENST00000515219 C7orf43Q8WVR3 580 aa22.34■■□□□ 1.17
DDR1-277ENST00000515219 RBM17Q96I25 401 aaKnown RBP22.34■■□□□ 1.17
DDR1-277ENST00000515219 MYD88Q99836 296 aa22.34■■□□□ 1.17
DDR1-277ENST00000515219 CACNA1FO60840 1977 aa22.33■■□□□ 1.17
DDR1-277ENST00000515219 SLC4A2P04920 1241 aa22.33■■□□□ 1.17
DDR1-277ENST00000515219 HOXA10P31260 410 aaPredicted RBP22.33■■□□□ 1.17
DDR1-277ENST00000515219 PRELPP51888 382 aa22.33■■□□□ 1.17
DDR1-277ENST00000515219 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
DDR1-277ENST00000515219 TAOK3Q9H2K8 898 aa22.33■■□□□ 1.17
DDR1-277ENST00000515219 VAMP4O75379 141 aa22.32■■□□□ 1.16
DDR1-277ENST00000515219 ZNF521Q96K83 1311 aa22.31■■□□□ 1.16
DDR1-277ENST00000515219 TIAM2Q8IVF5 1701 aa22.31■■□□□ 1.16
DDR1-277ENST00000515219 DICER1Q9UPY3 1922 aaKnown RBP22.31■■□□□ 1.16
DDR1-277ENST00000515219 TRIM28Q13263 835 aaKnown RBP22.31■■□□□ 1.16
DDR1-277ENST00000515219 OLFM4Q6UX06 510 aa22.31■■□□□ 1.16
DDR1-277ENST00000515219 FAM89AQ96GI7 184 aa22.31■■□□□ 1.16
DDR1-277ENST00000515219 CRAMP1Q96RY5 1269 aa22.31■■□□□ 1.16
DDR1-277ENST00000515219 MAP3K2Q9Y2U5 619 aa22.31■■□□□ 1.16
DDR1-277ENST00000515219 DDX60Q8IY21 1712 aaKnown RBP22.31■■□□□ 1.16
DDR1-277ENST00000515219 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
DDR1-277ENST00000515219 RTL5Q5HYW3 569 aaPredicted RBP22.3■■□□□ 1.16
DDR1-277ENST00000515219 KSR2Q6VAB6 950 aa22.3■■□□□ 1.16
DDR1-277ENST00000515219 G2E3Q7L622 706 aa22.3■■□□□ 1.16
DDR1-277ENST00000515219 METTL22Q9BUU2 404 aaPredicted RBP22.3■■□□□ 1.16
DDR1-277ENST00000515219 PI4KAP2A4QPH2 592 aa22.29■■□□□ 1.16
DDR1-277ENST00000515219 RTKN2Q8IZC4 609 aa22.29■■□□□ 1.16
DDR1-277ENST00000515219 PI4KAP1Q8N8J0 262 aa22.29■■□□□ 1.16
DDR1-277ENST00000515219 ZC3H4Q9UPT8 1303 aaKnown RBP22.29■■□□□ 1.16
DDR1-277ENST00000515219 PPEF1O14829 653 aaPredicted RBP22.28■■□□□ 1.16
DDR1-277ENST00000515219 FKBP4Q02790 459 aaKnown RBP eCLIP22.27■■□□□ 1.16
DDR1-277ENST00000515219 CCDC191Q8NCU4 936 aa22.27■■□□□ 1.16
DDR1-277ENST00000515219 CWC25Q9NXE8 425 aaPredicted RBP22.27■■□□□ 1.16
DDR1-277ENST00000515219 ABCC4O15439 1325 aa22.27■■□□□ 1.16
DDR1-277ENST00000515219 KDM2BQ8NHM5 1336 aa22.27■■□□□ 1.16
DDR1-277ENST00000515219 IRS4O14654 1257 aaPredicted RBP22.26■■□□□ 1.15
DDR1-277ENST00000515219 C1QTNF8P60827 252 aa22.26■■□□□ 1.15
DDR1-277ENST00000515219 NEXNQ0ZGT2 675 aa22.26■■□□□ 1.15
DDR1-277ENST00000515219 FLIIQ13045 1269 aa22.26■■□□□ 1.15
DDR1-277ENST00000515219 CC2D2BQ6DHV5 1058 aa22.26■■□□□ 1.15
DDR1-277ENST00000515219 DDX46Q7L014 1031 aaKnown RBP22.26■■□□□ 1.15
DDR1-277ENST00000515219 MIER1Q8N108 512 aa22.26■■□□□ 1.15
DDR1-277ENST00000515219 ZBTB38Q8NAP3 1195 aaPredicted RBP22.26■■□□□ 1.15
DDR1-277ENST00000515219 TAF1P21675 1872 aa22.26■■□□□ 1.15
DDR1-277ENST00000515219 FKBP5Q13451 457 aaPredicted RBP22.25■■□□□ 1.15
DDR1-277ENST00000515219 NMRK2Q9NPI5 230 aa22.25■■□□□ 1.15
DDR1-277ENST00000515219 E9PSI1 815 aa22.24■■□□□ 1.15
DDR1-277ENST00000515219 TMX4Q9H1E5 349 aaPredicted RBP22.24■■□□□ 1.15
DDR1-277ENST00000515219 KIF3CO14782 793 aa22.23■■□□□ 1.15
DDR1-277ENST00000515219 PCCAP05165 728 aaPredicted RBP22.23■■□□□ 1.15
DDR1-277ENST00000515219 JARID2Q92833 1246 aaPredicted RBP22.23■■□□□ 1.15
DDR1-277ENST00000515219 ZNF277Q9NRM2 450 aaPredicted RBP22.23■■□□□ 1.15
DDR1-277ENST00000515219 GLTPD2A6NH11 291 aa22.22■■□□□ 1.15
DDR1-277ENST00000515219 BBOX1O75936 387 aa22.22■■□□□ 1.15
DDR1-277ENST00000515219 IGKV5-2P06315 115 aa22.22■■□□□ 1.15
DDR1-277ENST00000515219 HSP90B1P14625 803 aaKnown RBP22.22■■□□□ 1.15
DDR1-277ENST00000515219 GRAPQ13588 217 aa22.22■■□□□ 1.15
DDR1-277ENST00000515219 SF3B3Q15393 1217 aaKnown RBP22.22■■□□□ 1.15
DDR1-277ENST00000515219 GRIPAP1Q4V328 841 aa22.22■■□□□ 1.15
DDR1-277ENST00000515219 GRAPLQ8TC17 118 aaPredicted RBP22.22■■□□□ 1.15
DDR1-277ENST00000515219 ATP6V0A2Q9Y487 856 aa22.22■■□□□ 1.15
DDR1-277ENST00000515219 CWF19L2Q2TBE0 894 aaKnown RBP22.21■■□□□ 1.15
DDR1-277ENST00000515219 DPY19L2Q6NUT2 758 aa22.21■■□□□ 1.15
DDR1-277ENST00000515219 SLC51AQ86UW1 340 aa22.21■■□□□ 1.15
DDR1-277ENST00000515219 PSMD1Q99460 953 aa22.21■■□□□ 1.15
DDR1-277ENST00000515219 SNED1Q8TER0 1413 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms